Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_H19
(652 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000263-3|AAL77185.1| 697|Caenorhabditis elegans Hypothetical ... 51 6e-07
AF000263-2|AAK21464.1| 755|Caenorhabditis elegans Hypothetical ... 51 6e-07
AF000263-1|AAK21462.1| 781|Caenorhabditis elegans Hypothetical ... 51 6e-07
Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical pr... 49 3e-06
Z79598-3|CAB01865.1| 680|Caenorhabditis elegans Hypothetical pr... 30 1.6
AJ242473-1|CAB43345.1| 680|Caenorhabditis elegans SYM-1 protein... 30 1.6
Z74030-16|CAI79165.1| 481|Caenorhabditis elegans Hypothetical p... 29 3.8
Z74030-7|CAA98447.2| 559|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z74030-6|CAA98444.2| 508|Caenorhabditis elegans Hypothetical pr... 29 3.8
U41554-3|AAA83298.2| 745|Caenorhabditis elegans Nematode astaci... 28 6.6
U80454-6|AAB37879.1| 786|Caenorhabditis elegans Hypothetical pr... 27 8.7
>AF000263-3|AAL77185.1| 697|Caenorhabditis elegans Hypothetical
protein T08B2.7c protein.
Length = 697
Score = 51.2 bits (117), Expect = 6e-07
Identities = 23/69 (33%), Positives = 41/69 (59%)
Frame = +3
Query: 207 AVPASQVHTKCKLVNGVYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIIS 386
+ PA Q + + V VV +D PN K N LN + E+ +++++++ I++ V++S
Sbjct: 51 SAPAMQTTHRVEKQGDVAVVKIDLPNTKENVLNKALFAEMKATLDKLQSDESIKSIVVMS 110
Query: 387 GKPGCFIAG 413
GKP F+AG
Sbjct: 111 GKPNSFVAG 119
Score = 51.2 bits (117), Expect = 6e-07
Identities = 25/47 (53%), Positives = 32/47 (68%)
Frame = +1
Query: 412 GADISMIENCKTKEEVVSLSKRGHEIFRRIEQSRKPYIAAIQGSCLG 552
GADI MI+ T +LS+ G E F RIE+S+KP +AAI GSC+G
Sbjct: 119 GADIQMIKAEGTATATETLSREGQEQFFRIEKSQKPVVAAIMGSCMG 165
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/25 (68%), Positives = 17/25 (68%)
Frame = +2
Query: 578 CKYRIAVKDSXTGFGLPXVMLGLLP 652
C YRIAV D T LP VMLGLLP
Sbjct: 174 CHYRIAVNDKKTLLSLPEVMLGLLP 198
>AF000263-2|AAK21464.1| 755|Caenorhabditis elegans Hypothetical
protein T08B2.7b protein.
Length = 755
Score = 51.2 bits (117), Expect = 6e-07
Identities = 23/69 (33%), Positives = 41/69 (59%)
Frame = +3
Query: 207 AVPASQVHTKCKLVNGVYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIIS 386
+ PA Q + + V VV +D PN K N LN + E+ +++++++ I++ V++S
Sbjct: 25 SAPAMQTTHRVEKQGDVAVVKIDLPNTKENVLNKALFAEMKATLDKLQSDESIKSIVVMS 84
Query: 387 GKPGCFIAG 413
GKP F+AG
Sbjct: 85 GKPNSFVAG 93
Score = 51.2 bits (117), Expect = 6e-07
Identities = 25/47 (53%), Positives = 32/47 (68%)
Frame = +1
Query: 412 GADISMIENCKTKEEVVSLSKRGHEIFRRIEQSRKPYIAAIQGSCLG 552
GADI MI+ T +LS+ G E F RIE+S+KP +AAI GSC+G
Sbjct: 93 GADIQMIKAEGTATATETLSREGQEQFFRIEKSQKPVVAAIMGSCMG 139
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/25 (68%), Positives = 17/25 (68%)
Frame = +2
Query: 578 CKYRIAVKDSXTGFGLPXVMLGLLP 652
C YRIAV D T LP VMLGLLP
Sbjct: 148 CHYRIAVNDKKTLLSLPEVMLGLLP 172
>AF000263-1|AAK21462.1| 781|Caenorhabditis elegans Hypothetical
protein T08B2.7a protein.
Length = 781
Score = 51.2 bits (117), Expect = 6e-07
Identities = 23/69 (33%), Positives = 41/69 (59%)
Frame = +3
Query: 207 AVPASQVHTKCKLVNGVYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIIS 386
+ PA Q + + V VV +D PN K N LN + E+ +++++++ I++ V++S
Sbjct: 51 SAPAMQTTHRVEKQGDVAVVKIDLPNTKENVLNKALFAEMKATLDKLQSDESIKSIVVMS 110
Query: 387 GKPGCFIAG 413
GKP F+AG
Sbjct: 111 GKPNSFVAG 119
Score = 51.2 bits (117), Expect = 6e-07
Identities = 25/47 (53%), Positives = 32/47 (68%)
Frame = +1
Query: 412 GADISMIENCKTKEEVVSLSKRGHEIFRRIEQSRKPYIAAIQGSCLG 552
GADI MI+ T +LS+ G E F RIE+S+KP +AAI GSC+G
Sbjct: 119 GADIQMIKAEGTATATETLSREGQEQFFRIEKSQKPVVAAIMGSCMG 165
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/25 (68%), Positives = 17/25 (68%)
Frame = +2
Query: 578 CKYRIAVKDSXTGFGLPXVMLGLLP 652
C YRIAV D T LP VMLGLLP
Sbjct: 174 CHYRIAVNDKKTLLSLPEVMLGLLP 198
>Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical
protein C29F3.1 protein.
Length = 755
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/90 (25%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Frame = +3
Query: 150 KILRSRKELFISGVHSRKYAVPASQVHT--KCKLVNGVYVVTLDSPNVKVNSLNTQVMEE 323
+++ +F + + R ++ A VH+ + + V V+ +D PN N LN + E
Sbjct: 4 RVVHRSSSVFRTNLSFRLFSQSAFAVHSTHRVEKQGDVAVMKIDLPNTTENVLNKALFAE 63
Query: 324 VSNIVNEIETNSGIEAAVIISGKPGCFIAG 413
++ ++ ++++ ++A V++SGKP F+AG
Sbjct: 64 MNETLDRLQSDQSVKAIVVMSGKPNSFVAG 93
Score = 44.0 bits (99), Expect = 9e-05
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = +1
Query: 412 GADISMIENCKTKEEVVSLSKRGHEIFRRIEQSRKPYIAAIQGSCLG 552
GADI M + KT V +L + G + IE S+KP +AAI GSC+G
Sbjct: 93 GADIQMFKAEKTAAGVSNLLREGQKQLLTIELSQKPIVAAIMGSCMG 139
Score = 35.5 bits (78), Expect = 0.033
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2
Query: 578 CKYRIAVKDSXTGFGLPXVMLGLLP 652
C YRIAV D T GLP V LG++P
Sbjct: 148 CHYRIAVNDKKTLLGLPEVTLGIMP 172
>Z79598-3|CAB01865.1| 680|Caenorhabditis elegans Hypothetical
protein C44H4.3 protein.
Length = 680
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/48 (29%), Positives = 29/48 (60%)
Frame = -3
Query: 530 AAIYGFRDCSILLNISCPLLDRLTTSSFVLQFSIMLISAPCNEASRLA 387
+A+ G R +IL ++ C ++ +TT +FV S++ ++ CN+ +A
Sbjct: 126 SALAGLRVLNIL-SLKCNKIENITTKAFVNMTSLIDVNLGCNQICSMA 172
>AJ242473-1|CAB43345.1| 680|Caenorhabditis elegans SYM-1 protein
protein.
Length = 680
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/48 (29%), Positives = 29/48 (60%)
Frame = -3
Query: 530 AAIYGFRDCSILLNISCPLLDRLTTSSFVLQFSIMLISAPCNEASRLA 387
+A+ G R +IL ++ C ++ +TT +FV S++ ++ CN+ +A
Sbjct: 126 SALAGLRVLNIL-SLKCNKIENITTKAFVNMTSLIDVNLGCNQICSMA 172
>Z74030-16|CAI79165.1| 481|Caenorhabditis elegans Hypothetical
protein D1054.9e protein.
Length = 481
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +3
Query: 240 KLVNGVYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAV 377
K +NGV + S N+ N NT+++ + ++V + + S EA +
Sbjct: 377 KAINGVSASGVSSSNLLTNEPNTELLAAIKDVVAKFKVASLDEAGI 422
>Z74030-7|CAA98447.2| 559|Caenorhabditis elegans Hypothetical
protein D1054.9b protein.
Length = 559
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +3
Query: 240 KLVNGVYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAV 377
K +NGV + S N+ N NT+++ + ++V + + S EA +
Sbjct: 404 KAINGVSASGVSSSNLLTNEPNTELLAAIKDVVAKFKVASLDEAGI 449
>Z74030-6|CAA98444.2| 508|Caenorhabditis elegans Hypothetical
protein D1054.9a protein.
Length = 508
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +3
Query: 240 KLVNGVYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAV 377
K +NGV + S N+ N NT+++ + ++V + + S EA +
Sbjct: 404 KAINGVSASGVSSSNLLTNEPNTELLAAIKDVVAKFKVASLDEAGI 449
>U41554-3|AAA83298.2| 745|Caenorhabditis elegans Nematode astacin
protease protein38 protein.
Length = 745
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/51 (29%), Positives = 29/51 (56%)
Frame = -1
Query: 391 LPDIMTAASIPEFVSISFTMLLTSSITWVLSEFTLTFGESKVTT*TPLTNL 239
L + ++++ E ++S T T S TW+ +E + GE+++TT +P L
Sbjct: 549 LTPLTSSSTTTESTTVSST---TQSTTWLPTEPSFATGETEITTASPTITL 596
>U80454-6|AAB37879.1| 786|Caenorhabditis elegans Hypothetical
protein T16A1.2 protein.
Length = 786
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 264 VTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGI 365
V D PN+K NSL Q + + IV I +GI
Sbjct: 373 VNSDIPNLKYNSLLPQKLHLIGYIVQVINNKNGI 406
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,217,262
Number of Sequences: 27780
Number of extensions: 251653
Number of successful extensions: 658
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 658
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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