Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_H18
(635 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78417-2|CAB01692.1| 258|Caenorhabditis elegans Hypothetical pr... 75 4e-14
Z78417-1|CAB01684.1| 255|Caenorhabditis elegans Hypothetical pr... 75 4e-14
Z72508-4|CAA96637.2| 216|Caenorhabditis elegans Hypothetical pr... 59 2e-09
Z83238-7|CAB05797.1| 313|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z99281-46|CAB54455.3| 795|Caenorhabditis elegans Hypothetical p... 29 3.7
AF125956-4|AAD14723.1| 353|Caenorhabditis elegans Serpentine re... 29 3.7
AF016429-3|AAB65366.1| 383|Caenorhabditis elegans Hypothetical ... 29 3.7
U70855-5|AAB09160.2| 886|Caenorhabditis elegans Hypothetical pr... 28 4.9
U55857-10|AAA98035.2| 895|Caenorhabditis elegans Hypothetical p... 28 4.9
AC093703-5|AAL00865.1| 725|Caenorhabditis elegans Hypothetical ... 28 4.9
AC006794-3|AAK68503.2| 192|Caenorhabditis elegans Hypothetical ... 28 4.9
>Z78417-2|CAB01692.1| 258|Caenorhabditis elegans Hypothetical
protein C35C5.3b protein.
Length = 258
Score = 74.9 bits (176), Expect = 4e-14
Identities = 31/92 (33%), Positives = 53/92 (57%)
Frame = +3
Query: 360 TMNIYYCYSCGYKKVFEDYAGIIQQKYPEISVIGANYDPPGFNMYLSRIIGFGKMLVIMC 539
T+ I+YC SCGYK+ F+ + ++KYP + + GAN+ P + Y+++ + F KM V++
Sbjct: 97 TLRIFYCVSCGYKQAFDQFTTFAKEKYPNMPIEGANFAPVLWKAYVAQALSFVKMAVLVL 156
Query: 540 ILSGVNIFAWLNKPQPAWWSWCLENKLYACMM 635
+L G+N F P NK+ +CM+
Sbjct: 157 VLGGINPFERFGLGYPQILQHAHGNKMSSCML 188
>Z78417-1|CAB01684.1| 255|Caenorhabditis elegans Hypothetical
protein C35C5.3a protein.
Length = 255
Score = 74.9 bits (176), Expect = 4e-14
Identities = 31/92 (33%), Positives = 53/92 (57%)
Frame = +3
Query: 360 TMNIYYCYSCGYKKVFEDYAGIIQQKYPEISVIGANYDPPGFNMYLSRIIGFGKMLVIMC 539
T+ I+YC SCGYK+ F+ + ++KYP + + GAN+ P + Y+++ + F KM V++
Sbjct: 94 TLRIFYCVSCGYKQAFDQFTTFAKEKYPNMPIEGANFAPVLWKAYVAQALSFVKMAVLVL 153
Query: 540 ILSGVNIFAWLNKPQPAWWSWCLENKLYACMM 635
+L G+N F P NK+ +CM+
Sbjct: 154 VLGGINPFERFGLGYPQILQHAHGNKMSSCML 185
>Z72508-4|CAA96637.2| 216|Caenorhabditis elegans Hypothetical
protein F28H7.4 protein.
Length = 216
Score = 59.3 bits (137), Expect = 2e-09
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Frame = +3
Query: 297 THINADSDEGSISKIGSSVG-HTMNIYYCYSCGYKKVFEDYAGIIQQKYPEISVIGANYD 473
T +N +S + G S + I YC SCGYK+ F + ++KYP + + G N+
Sbjct: 49 TVVNENSHSQDVVDSGFSKDLPKLTILYCVSCGYKQAFNQFYEFAKEKYPGLVIEGGNFS 108
Query: 474 PPGFNMYLSRIIGFGKMLVIMCILSGVNIFAWLNKPQP 587
P + L++I+G K+ +I +++G N F ++ P
Sbjct: 109 PDFWKGCLAQIVGVAKIGLIAIVITGSNPFEYIGFGYP 146
>Z83238-7|CAB05797.1| 313|Caenorhabditis elegans Hypothetical
protein T08G3.8 protein.
Length = 313
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +1
Query: 139 KNKYSVVKRNNHCESNDLHPFIY*IRLEKISVCQTICFT*TRCYSFVLY 285
K Y + R N C S DLHP ++ + + Q CF C F+++
Sbjct: 34 KLSYYFLYRKNKCYSTDLHPVLF----RQFMIMQIACFF-NVCIKFLIF 77
>Z99281-46|CAB54455.3| 795|Caenorhabditis elegans Hypothetical
protein Y57G11C.32 protein.
Length = 795
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/51 (23%), Positives = 27/51 (52%)
Frame = +3
Query: 171 PLRKQRSSPIYLLNSVRKDISMSNNMFYLNAMLLVCTLLFTLTHINADSDE 323
P + +PI+ + ++ D+SM N++ + L+ + F + + +SDE
Sbjct: 158 PKTPSKFAPIFTESILQLDVSMQNDLLFFLEQHLISSAEFIFSELPLESDE 208
>AF125956-4|AAD14723.1| 353|Caenorhabditis elegans Serpentine
receptor, class h protein78 protein.
Length = 353
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 52 FLKFHKPISIDLYLVLFLVHYKIENIRSP-KNKYSVVKRNNHCESNDLHPFIY 207
F K P+ I L++ +F ++ I +I +N+Y+ + N H S L F+Y
Sbjct: 100 FEKIGMPVVIQLWIGIFSINQMIMSITILFENRYNSIPFNKHKISGKLLKFVY 152
>AF016429-3|AAB65366.1| 383|Caenorhabditis elegans Hypothetical
protein T21H3.5 protein.
Length = 383
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +1
Query: 70 PISIDLYLVLFLVHYKIENIRSPKNKYSVVKRNNH 174
PI++++YL+ F + KIE+ ++ V+K + H
Sbjct: 153 PITLEIYLIFFTPNQKIESYSEVSHRDVVMKLSGH 187
>U70855-5|AAB09160.2| 886|Caenorhabditis elegans Hypothetical
protein K08F11.2 protein.
Length = 886
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +1
Query: 382 ILVATKRYLKTMQELYNKNTQRFLSLELTMTHLVLT 489
+L A KR K +E N NT+R SL+L ++++ LT
Sbjct: 14 LLNARKRRWKKDEEDENSNTERNASLDLNLSNVELT 49
>U55857-10|AAA98035.2| 895|Caenorhabditis elegans Hypothetical
protein K08D10.1 protein.
Length = 895
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +1
Query: 382 ILVATKRYLKTMQELYNKNTQRFLSLELTMTHLVLT 489
+L A KR K +E N NT+R SL+L ++++ LT
Sbjct: 14 LLNARKRRWKKDEEDENSNTERNASLDLNLSNVELT 49
>AC093703-5|AAL00865.1| 725|Caenorhabditis elegans Hypothetical
protein Y20F4.5 protein.
Length = 725
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +1
Query: 382 ILVATKRYLKTMQELYNKNTQRFLSLELTMTHLVLT 489
+L A KR K +E N NT+R SL+L ++++ LT
Sbjct: 14 LLNARKRRWKKDEEDENSNTERNASLDLNLSNVELT 49
>AC006794-3|AAK68503.2| 192|Caenorhabditis elegans Hypothetical
protein Y50D4A.2 protein.
Length = 192
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -1
Query: 464 SSNDRNLWVFLLYNSCIVFKYLFVATRITVIDIHCMPD 351
S N RNL + + + F LF+ ++ I +C+PD
Sbjct: 99 SENSRNLKIDTVVKVFMQFSALFLLRHVSAITAYCIPD 136
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,998,117
Number of Sequences: 27780
Number of extensions: 329975
Number of successful extensions: 836
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 836
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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