Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_H17
(543 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X79239-1|CAA55821.1| 151|Homo sapiens ribosomal protein S13 pro... 151 2e-36
L01124-1|AAA60283.1| 151|Homo sapiens ribosomal protein S13 pro... 151 2e-36
D88010-1|BAA13528.1| 151|Homo sapiens ribosomal protein S13 pro... 151 2e-36
BC100032-1|AAI00033.1| 151|Homo sapiens ribosomal protein S13 p... 151 2e-36
BC066322-1|AAH66322.1| 151|Homo sapiens ribosomal protein S13 p... 151 2e-36
BC029732-1|AAH29732.1| 151|Homo sapiens ribosomal protein S13 p... 151 2e-36
BC006772-1|AAH06772.1| 151|Homo sapiens ribosomal protein S13 p... 151 2e-36
BC000475-1|AAH00475.1| 151|Homo sapiens ribosomal protein S13 p... 151 2e-36
L05090-1|AAC15854.1| 116|Homo sapiens ribosomal protein S13 pro... 123 5e-28
AM083042-1|CAL07188.1| 97|Homo sapiens immunoglobulin heavy ch... 30 6.0
>X79239-1|CAA55821.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 151 bits (366), Expect = 2e-36
Identities = 70/78 (89%), Positives = 76/78 (97%)
Frame = +1
Query: 292 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 471
I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK
Sbjct: 74 ILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKR 133
Query: 472 VLPPNWKYESSTASALVA 525
VLPPNWKYESSTASALVA
Sbjct: 134 VLPPNWKYESSTASALVA 151
Score = 146 bits (355), Expect = 3e-35
Identities = 68/73 (93%), Positives = 71/73 (97%)
Frame = +3
Query: 72 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 251
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 252 AQVRFVTGKKILR 290
AQVRFVTG KILR
Sbjct: 61 AQVRFVTGNKILR 73
>L01124-1|AAA60283.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 151 bits (366), Expect = 2e-36
Identities = 70/78 (89%), Positives = 76/78 (97%)
Frame = +1
Query: 292 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 471
I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK
Sbjct: 74 ILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKR 133
Query: 472 VLPPNWKYESSTASALVA 525
VLPPNWKYESSTASALVA
Sbjct: 134 VLPPNWKYESSTASALVA 151
Score = 146 bits (355), Expect = 3e-35
Identities = 68/73 (93%), Positives = 71/73 (97%)
Frame = +3
Query: 72 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 251
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 252 AQVRFVTGKKILR 290
AQVRFVTG KILR
Sbjct: 61 AQVRFVTGNKILR 73
>D88010-1|BAA13528.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 151 bits (366), Expect = 2e-36
Identities = 70/78 (89%), Positives = 76/78 (97%)
Frame = +1
Query: 292 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 471
I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK
Sbjct: 74 ILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKR 133
Query: 472 VLPPNWKYESSTASALVA 525
VLPPNWKYESSTASALVA
Sbjct: 134 VLPPNWKYESSTASALVA 151
Score = 146 bits (355), Expect = 3e-35
Identities = 68/73 (93%), Positives = 71/73 (97%)
Frame = +3
Query: 72 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 251
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 252 AQVRFVTGKKILR 290
AQVRFVTG KILR
Sbjct: 61 AQVRFVTGNKILR 73
>BC100032-1|AAI00033.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 151 bits (366), Expect = 2e-36
Identities = 70/78 (89%), Positives = 76/78 (97%)
Frame = +1
Query: 292 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 471
I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK
Sbjct: 74 ILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKR 133
Query: 472 VLPPNWKYESSTASALVA 525
VLPPNWKYESSTASALVA
Sbjct: 134 VLPPNWKYESSTASALVA 151
Score = 146 bits (355), Expect = 3e-35
Identities = 68/73 (93%), Positives = 71/73 (97%)
Frame = +3
Query: 72 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 251
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 252 AQVRFVTGKKILR 290
AQVRFVTG KILR
Sbjct: 61 AQVRFVTGNKILR 73
>BC066322-1|AAH66322.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 151 bits (366), Expect = 2e-36
Identities = 70/78 (89%), Positives = 76/78 (97%)
Frame = +1
Query: 292 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 471
I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK
Sbjct: 74 ILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKR 133
Query: 472 VLPPNWKYESSTASALVA 525
VLPPNWKYESSTASALVA
Sbjct: 134 VLPPNWKYESSTASALVA 151
Score = 146 bits (355), Expect = 3e-35
Identities = 68/73 (93%), Positives = 71/73 (97%)
Frame = +3
Query: 72 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 251
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 252 AQVRFVTGKKILR 290
AQVRFVTG KILR
Sbjct: 61 AQVRFVTGNKILR 73
>BC029732-1|AAH29732.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 151 bits (366), Expect = 2e-36
Identities = 70/78 (89%), Positives = 76/78 (97%)
Frame = +1
Query: 292 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 471
I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK
Sbjct: 74 ILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKR 133
Query: 472 VLPPNWKYESSTASALVA 525
VLPPNWKYESSTASALVA
Sbjct: 134 VLPPNWKYESSTASALVA 151
Score = 146 bits (355), Expect = 3e-35
Identities = 68/73 (93%), Positives = 71/73 (97%)
Frame = +3
Query: 72 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 251
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 252 AQVRFVTGKKILR 290
AQVRFVTG KILR
Sbjct: 61 AQVRFVTGNKILR 73
>BC006772-1|AAH06772.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 151 bits (366), Expect = 2e-36
Identities = 70/78 (89%), Positives = 76/78 (97%)
Frame = +1
Query: 292 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 471
I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK
Sbjct: 74 ILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKR 133
Query: 472 VLPPNWKYESSTASALVA 525
VLPPNWKYESSTASALVA
Sbjct: 134 VLPPNWKYESSTASALVA 151
Score = 146 bits (355), Expect = 3e-35
Identities = 68/73 (93%), Positives = 71/73 (97%)
Frame = +3
Query: 72 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 251
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 252 AQVRFVTGKKILR 290
AQVRFVTG KILR
Sbjct: 61 AQVRFVTGNKILR 73
>BC000475-1|AAH00475.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 151 bits (366), Expect = 2e-36
Identities = 70/78 (89%), Positives = 76/78 (97%)
Frame = +1
Query: 292 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 471
I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK
Sbjct: 74 ILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKR 133
Query: 472 VLPPNWKYESSTASALVA 525
VLPPNWKYESSTASALVA
Sbjct: 134 VLPPNWKYESSTASALVA 151
Score = 146 bits (355), Expect = 3e-35
Identities = 68/73 (93%), Positives = 71/73 (97%)
Frame = +3
Query: 72 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 251
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 252 AQVRFVTGKKILR 290
AQVRFVTG KILR
Sbjct: 61 AQVRFVTGNKILR 73
>L05090-1|AAC15854.1| 116|Homo sapiens ribosomal protein S13
protein.
Length = 116
Score = 123 bits (296), Expect = 5e-28
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = +3
Query: 105 SQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKI 284
SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGVAQVRFVTG KI
Sbjct: 1 SQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKI 60
Query: 285 LR 290
LR
Sbjct: 61 LR 62
Score = 99.5 bits (237), Expect = 7e-21
Identities = 46/54 (85%), Positives = 52/54 (96%)
Frame = +1
Query: 292 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLAR 453
I+K+ GLA DLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLAR
Sbjct: 63 ILKSKGLASDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLAR 116
>AM083042-1|CAL07188.1| 97|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 97
Score = 29.9 bits (64), Expect = 6.0
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +2
Query: 209 SLTNWCNAEGFTWSCPSKIRNWQKDPPXS*RQWV 310
SL C A GFT+S S +RNW + P +WV
Sbjct: 20 SLRLSCAASGFTFS--SYVRNWVRQSPGKGLEWV 51
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,634,873
Number of Sequences: 237096
Number of extensions: 1515360
Number of successful extensions: 4457
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4457
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5308067764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -