Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_H09
         (522 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    23   2.2  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    23   2.2  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    21   5.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   6.6  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 266 TRKQRLPESPLKT*SAVHSRLV 331
           TR Q +P   +KT   +HS LV
Sbjct: 207 TRNQAVPTGTIKTLVQMHSNLV 228


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 266 TRKQRLPESPLKT*SAVHSRLV 331
           TR Q +P   +KT   +HS LV
Sbjct: 207 TRNQAVPTGTIKTLVQMHSNLV 228


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -3

Query: 37  TTCSQCVRRQK 5
           T+CS+C +RQK
Sbjct: 71  TSCSKCSQRQK 81


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = +2

Query: 32  RCVWCRNRF 58
           +CVWC+  F
Sbjct: 379 KCVWCKQSF 387


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,276
Number of Sequences: 336
Number of extensions: 2587
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)