Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_H08
(625 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P26373 Cluster: 60S ribosomal protein L13; n=111; Eukar... 126 3e-28
UniRef50_UPI0000D563A2 Cluster: PREDICTED: similar to 60S riboso... 115 8e-25
UniRef50_Q4PAD9 Cluster: 60S ribosomal protein L13; n=2; Basidio... 109 5e-23
UniRef50_Q9FF90 Cluster: 60S ribosomal protein L13-3; n=27; Viri... 103 5e-21
UniRef50_A2EYN3 Cluster: 60S ribosomal protein L13; n=6; Trichom... 100 6e-20
UniRef50_A1D9H8 Cluster: 60S ribosomal protein L13; n=26; Fungi/... 99 7e-20
UniRef50_A3FQ93 Cluster: 60S ribosomal protein L13, putative; n=... 96 5e-19
UniRef50_A0CPH3 Cluster: 60S ribosomal protein L13; n=9; Oligohy... 96 7e-19
UniRef50_O59931 Cluster: 60S ribosomal protein L13; n=5; Ascomyc... 93 4e-18
UniRef50_Q57V55 Cluster: 60S ribosomal protein L13, putative; n=... 91 2e-17
UniRef50_Q4X4D3 Cluster: 60S ribosomal protein L13, putative; n=... 87 3e-16
UniRef50_O15616 Cluster: 60S ribosomal protein L13; n=3; Entamoe... 83 4e-15
UniRef50_UPI0000DC2213 Cluster: UPI0000DC2213 related cluster; n... 78 2e-13
UniRef50_Q4N9B5 Cluster: 60S ribosomal protein L13e, putative; n... 76 6e-13
UniRef50_Q9AW85 Cluster: 60S ribosomal protein L13; n=1; Guillar... 68 2e-10
UniRef50_Q8SSC1 Cluster: 60S RIBOSOMAL PROTEIN L13; n=1; Encepha... 66 6e-10
UniRef50_O14377 Cluster: Putative uncharacterized protein; n=1; ... 59 1e-07
UniRef50_UPI00005A0D5A Cluster: PREDICTED: similar to ribosomal ... 52 1e-05
UniRef50_Q018B3 Cluster: Chromosome 05 contig 1, DNA sequence; n... 41 0.021
UniRef50_Q6LAB9 Cluster: 60S ribosomal protein L13; n=1; Arabido... 40 0.048
UniRef50_A2YRI3 Cluster: 60S ribosomal protein L13; n=2; Oryza s... 39 0.11
UniRef50_Q8ZWS7 Cluster: 60S ribosomal protein L13; n=4; Pyrobac... 39 0.11
UniRef50_Q9YEN9 Cluster: 50S ribosomal protein L13e; n=3; Desulf... 36 1.0
UniRef50_A3H6W8 Cluster: Ribosomal protein L13; n=1; Caldivirga ... 34 2.4
UniRef50_UPI0000E49D21 Cluster: PREDICTED: similar to LOC495497 ... 34 3.2
UniRef50_Q97W05 Cluster: 50S ribosomal protein L13e; n=2; Sulfol... 34 3.2
UniRef50_Q0UNB4 Cluster: Predicted protein; n=1; Phaeosphaeria n... 33 4.2
UniRef50_Q74E61 Cluster: Long-chain-fatty-acid--CoA ligase, puta... 32 9.7
UniRef50_A1RY56 Cluster: 60S ribosomal protein L13; n=1; Thermof... 32 9.7
>UniRef50_P26373 Cluster: 60S ribosomal protein L13; n=111;
Eukaryota|Rep: 60S ribosomal protein L13 - Homo sapiens
(Human)
Length = 211
Score = 126 bits (305), Expect = 3e-28
Identities = 58/96 (60%), Positives = 67/96 (69%)
Frame = +2
Query: 59 NNMXPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 238
N M HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 239 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 346
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPR
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPR 101
Score = 103 bits (246), Expect = 5e-21
Identities = 55/91 (60%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
Frame = +3
Query: 354 NKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 530
NKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 531 SXARPITEXEKNFKAYQYLXGARSIAKLVGI 623
AR ITE EKNFKA+ L AR+ A+L GI
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGI 194
>UniRef50_UPI0000D563A2 Cluster: PREDICTED: similar to 60S ribosomal
protein L13; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to 60S ribosomal protein L13 - Tribolium
castaneum
Length = 198
Score = 115 bits (277), Expect = 8e-25
Identities = 52/100 (52%), Positives = 67/100 (67%)
Frame = +2
Query: 47 MGKGNNMXPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRC 226
M + NNM PNGHFHK WQ+ VK WFNQP ++ RRK R LRP+V C
Sbjct: 1 MVRHNNMIPNGHFHKKWQQKVKLWFNQPMKKLRRKALR-AKKSRQLAPKPTELLRPLVHC 59
Query: 227 PTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 346
P+ RY +KVRAGRGFT +E++ AG++ +AR+ G+AVDPR
Sbjct: 60 PSERYKSKVRAGRGFTFQELKQAGMSDKYARSFGVAVDPR 99
Score = 41.1 bits (92), Expect = 0.021
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Frame = +3
Query: 354 NKSVESLQINVQRIKEYRARLILFPKGK-KVLKGEANEEERKLATQLRGPLMPVQQPAPK 530
N+ ES+ N+QR+ EY++RLI P K KVLK + + L V+ K
Sbjct: 102 NRCTESIAANIQRLIEYKSRLIFLPDSKNKVLKIDDGKN-----------LNVVKVVPGK 150
Query: 531 SXARPITEXEKNFKAYQYLXGARSIAKLVGI 623
A + E EK F+A+ L AR K GI
Sbjct: 151 VKALKVGEEEKKFEAFVTLRRARCDEKFAGI 181
>UniRef50_Q4PAD9 Cluster: 60S ribosomal protein L13; n=2;
Basidiomycota|Rep: 60S ribosomal protein L13 - Ustilago
maydis (Smut fungus)
Length = 209
Score = 109 bits (262), Expect = 5e-23
Identities = 50/98 (51%), Positives = 64/98 (65%)
Frame = +2
Query: 53 KGNNMXPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPT 232
K NN+ N HF KDWQR VK WF+QP + RR+ R LRP VRCPT
Sbjct: 4 KHNNILHNNHFRKDWQRRVKVWFDQPGAKKRRRTAR-EAKAAKLGLRPVQLLRPAVRCPT 62
Query: 233 VRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 346
+RY+TK+R+GRGFT+ E++AAGL +AR++GI VD R
Sbjct: 63 LRYNTKIRSGRGFTIEEVKAAGLGKKYARSVGIPVDHR 100
Score = 58.0 bits (134), Expect = 2e-07
Identities = 33/89 (37%), Positives = 47/89 (52%)
Frame = +3
Query: 354 NKSVESLQINVQRIKEYRARLILFPKGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKS 533
NKS ESL++NV+RIK Y+ARL++ PK K K + + A + ++P+
Sbjct: 103 NKSEESLKLNVERIKAYQARLVVIPKLTKKNKDKKVDLSNVEAVRQVQSVLPLPAGTEAE 162
Query: 534 XARPITEXEKNFKAYQYLXGARSIAKLVG 620
R IT EK F AY+ L AR + G
Sbjct: 163 KPRAITSEEKEFNAYETLRKARGTHRAAG 191
>UniRef50_Q9FF90 Cluster: 60S ribosomal protein L13-3; n=27;
Viridiplantae|Rep: 60S ribosomal protein L13-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 206
Score = 103 bits (246), Expect = 5e-21
Identities = 48/98 (48%), Positives = 62/98 (63%)
Frame = +2
Query: 53 KGNNMXPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPT 232
K NN+ P+ HF K WQ +VKTWFNQPAR+ RR+ R LRP+V T
Sbjct: 2 KHNNVIPSSHFRKHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTSGPLRPVVHGQT 61
Query: 233 VRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 346
++Y+ KVRAG+GFTL E++ AG+ A TIGI+VD R
Sbjct: 62 LKYNMKVRAGKGFTLEELKVAGIPKKLAPTIGISVDHR 99
Score = 64.1 bits (149), Expect = 3e-09
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Frame = +3
Query: 354 NKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 530
N+S+E LQ NVQR+K Y+A+L++FP + ++V G++ EE ATQ++G MP+
Sbjct: 102 NRSLEGLQSNVQRLKTYKAKLVVFPRRSRQVKAGDSTPEELANATQVQGDYMPIASVKAA 161
Query: 531 SXARPITEXEKNFKAYQYLXGARSIAKLVG 620
+T K FKAY + R+ A+ G
Sbjct: 162 MELVKLTADLKAFKAYDKIRLERTNARHAG 191
>UniRef50_A2EYN3 Cluster: 60S ribosomal protein L13; n=6;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L13
- Trichomonas vaginalis G3
Length = 210
Score = 99.5 bits (237), Expect = 6e-20
Identities = 52/108 (48%), Positives = 61/108 (56%)
Frame = +2
Query: 23 PW*NSDVKMGKGNNMXPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXX 202
PW ++M NN PN H K W VKT+F+ PAR RR+ R
Sbjct: 16 PW--PFLEMVAKNNQIPNDHLRKYWYHRVKTYFDDPARAQRRRNARNLRAKKIAPRPAEG 73
Query: 203 XLRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 346
LRPIVRCPTVRY+ K R GRGFT +E+ AAG +P AR GIAVD R
Sbjct: 74 PLRPIVRCPTVRYNMKTRLGRGFTPKELVAAGFDPALARFQGIAVDAR 121
>UniRef50_A1D9H8 Cluster: 60S ribosomal protein L13; n=26;
Fungi/Metazoa group|Rep: 60S ribosomal protein L13 -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 243
Score = 99.1 bits (236), Expect = 7e-20
Identities = 45/88 (51%), Positives = 60/88 (68%)
Frame = +2
Query: 83 FHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAG 262
FHKDWQR V+ F+QP R++RR++ R+ LRP+VRCPTV+Y+ +VR G
Sbjct: 31 FHKDWQRRVRVHFDQPGRKHRRREARLAKAAAVAPRPVDK-LRPVVRCPTVKYNRRVRVG 89
Query: 263 RGFTLREIRAAGLNPVFARTIGIAVDPR 346
RGFTL E++ AG+ ART+GIAVD R
Sbjct: 90 RGFTLAELKEAGIPKKLARTVGIAVDHR 117
Score = 37.9 bits (84), Expect = 0.20
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +3
Query: 354 NKSVESLQINVQRIKEYRARLILFPK 431
N S ESL NV R+K+Y+ARLILFP+
Sbjct: 120 NYSKESLVANVARLKDYKARLILFPR 145
>UniRef50_A3FQ93 Cluster: 60S ribosomal protein L13, putative; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L13, putative
- Cryptosporidium parvum Iowa II
Length = 207
Score = 96.3 bits (229), Expect = 5e-19
Identities = 47/98 (47%), Positives = 61/98 (62%)
Frame = +2
Query: 59 NNMXPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 238
NN+ PN H+HK+++R++KTW+NQP R+ R+ R LRPIV PT R
Sbjct: 4 NNVIPNVHYHKNYKRWIKTWYNQPGRKQSRRIAR-QKAVAEAGFRPVGMLRPIVHPPTQR 62
Query: 239 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR*T 352
Y+ K R GRGFTL E+ A G+N A +IGIAVD R T
Sbjct: 63 YNMKTRLGRGFTLEELSACGINKKAAMSIGIAVDHRRT 100
Score = 39.1 bits (87), Expect = 0.085
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 8/84 (9%)
Frame = +3
Query: 360 SVESLQINVQRIKEYRARLILFP-KGKKVLKG-------EANEEERKLATQLRGPLMPVQ 515
S E+ QINV R+K+Y ++L P KGKK KG A EE + L P++
Sbjct: 103 SEETFQINVDRLKKYINGIVLQPRKGKKTKKGFAGIPNDSAREEFKALKNVSHEKAFPIK 162
Query: 516 QPAPKSXARPITEXEKNFKAYQYL 587
IT E+ F+A+ L
Sbjct: 163 AQTLAVKTHVITPEERKFRAFSTL 186
>UniRef50_A0CPH3 Cluster: 60S ribosomal protein L13; n=9;
Oligohymenophorea|Rep: 60S ribosomal protein L13 -
Paramecium tetraurelia
Length = 208
Score = 95.9 bits (228), Expect = 7e-19
Identities = 46/98 (46%), Positives = 61/98 (62%)
Frame = +2
Query: 53 KGNNMXPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPT 232
K N PN H K W RFVKT++NQPA + RR+Q R LRP+VR T
Sbjct: 2 KHNQQLPNAHMRKHWTRFVKTFYNQPAAK-RRRQLRRRAQALSASPRPVELLRPVVRGQT 60
Query: 233 VRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 346
++Y++ + GRGF+L E++ AGLN FART+GI+VD R
Sbjct: 61 IKYNSVQKLGRGFSLIELKEAGLNAAFARTVGISVDHR 98
Score = 36.7 bits (81), Expect = 0.45
Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 6/96 (6%)
Frame = +3
Query: 354 NKSVESLQINVQRIKEYRARLILFPK--GKK---VLKGEANEEERKLATQLRGPLMPVQQ 518
N + E L NV+R+K Y ++L+L+P+ GK V+K NE Q P + Q
Sbjct: 101 NLNQEELNNNVKRLKAYLSKLVLYPRVAGKPKNGVVKDSTNEVVAHPVAQNTNPEVLTFQ 160
Query: 519 PAPKSXARPITEXEKNFK-AYQYLXGARSIAKLVGI 623
PK + E K Y+ L AK VG+
Sbjct: 161 RTPKREKATVISKELRAKNVYRRLRQEWYNAKFVGV 196
>UniRef50_O59931 Cluster: 60S ribosomal protein L13; n=5;
Ascomycota|Rep: 60S ribosomal protein L13 - Candida
albicans (Yeast)
Length = 202
Score = 93.5 bits (222), Expect = 4e-18
Identities = 44/91 (48%), Positives = 59/91 (64%)
Frame = +2
Query: 74 NGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKV 253
N HF K WQ V+ F+Q ++ R+Q+R+ LRP+VR PTV+Y+ KV
Sbjct: 11 NNHFRKHWQERVRVHFDQAGKKASRRQSRLRKAAKIAPRPIDA-LRPVVRAPTVKYNRKV 69
Query: 254 RAGRGFTLREIRAAGLNPVFARTIGIAVDPR 346
RAGRGFTL E++A G+ P +ARTIGI+VD R
Sbjct: 70 RAGRGFTLAELKAVGIAPKYARTIGISVDHR 100
Score = 50.0 bits (114), Expect = 5e-05
Identities = 33/90 (36%), Positives = 50/90 (55%)
Frame = +3
Query: 354 NKSVESLQINVQRIKEYRARLILFPKGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKS 533
NKS E+ NV R++EY+++L++F K K + + E+ AT PV+QPAP+S
Sbjct: 103 NKSQETFDANVARLQEYKSKLVIFDKKTKASEVASFEQVDVSAT------FPVEQPAPES 156
Query: 534 XARPITEXEKNFKAYQYLXGARSIAKLVGI 623
R + E+ AY+ L AR+ K GI
Sbjct: 157 GLRAVEVPEQT--AYRTLRLARNEKKYKGI 184
>UniRef50_Q57V55 Cluster: 60S ribosomal protein L13, putative; n=7;
Trypanosomatidae|Rep: 60S ribosomal protein L13,
putative - Trypanosoma brucei
Length = 229
Score = 91.1 bits (216), Expect = 2e-17
Identities = 50/106 (47%), Positives = 63/106 (59%), Gaps = 6/106 (5%)
Frame = +2
Query: 47 MGKGNNMXPNGHFHKDWQRF------VKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXL 208
M KGNN P+ H K W VK +FNQPA++ RR++ R+ L
Sbjct: 12 MPKGNNAIPHVHQRKHWNPCSSQKGNVKVFFNQPAQKQRRRRLRLLKAKKIFPRPLKA-L 70
Query: 209 RPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 346
RP V CPTVRY+ K R GRGF+L E++AAG+ P +ARTIGI VD R
Sbjct: 71 RPQVNCPTVRYNMKRRLGRGFSLEELKAAGVKPRYARTIGIRVDRR 116
Score = 58.8 bits (136), Expect = 1e-07
Identities = 37/84 (44%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Frame = +3
Query: 354 NKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLR-----GPLMPVQ 515
NKS E + INVQR+K Y ++L+LFP KK KG+A EEE K ATQ R + +
Sbjct: 119 NKSEEGMNINVQRLKTYMSKLVLFPLNRKKPQKGDATEEEVKAATQDRSRYGTAAVGGLV 178
Query: 516 QPAPKSXARPITEXEKNFKAYQYL 587
PA + R +TE E K Y++L
Sbjct: 179 TPA-REAPRKVTEEESTKKMYKFL 201
>UniRef50_Q4X4D3 Cluster: 60S ribosomal protein L13, putative; n=5;
Plasmodium|Rep: 60S ribosomal protein L13, putative -
Plasmodium chabaudi
Length = 215
Score = 87.0 bits (206), Expect = 3e-16
Identities = 44/96 (45%), Positives = 56/96 (58%)
Frame = +2
Query: 59 NNMXPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 238
NN+ PN H HK WQR+V+ FN+ +R +R+ R L P+V CPT R
Sbjct: 5 NNVLPNVHLHKWWQRYVRVDFNKNIKRKQRRLLR-EKRRKQNGGTPIEKLHPVVHCPTQR 63
Query: 239 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 346
Y+ K R G+GFTL EI+A L P AR+IGI VD R
Sbjct: 64 YNYKTRLGKGFTLEEIKAVKLTPSAARSIGIIVDKR 99
>UniRef50_O15616 Cluster: 60S ribosomal protein L13; n=3; Entamoeba
histolytica|Rep: 60S ribosomal protein L13 - Entamoeba
histolytica
Length = 138
Score = 83.4 bits (197), Expect = 4e-15
Identities = 41/88 (46%), Positives = 53/88 (60%)
Frame = +2
Query: 83 FHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAG 262
F KDW+ V TW QP R+ RR Q R+ L+P V C R++ K+R G
Sbjct: 12 FGKDWRSKVHTWVQQPFRKIRRHQTRVEKAKSVFPATIKS-LKPSVHCMNQRFNYKLRLG 70
Query: 263 RGFTLREIRAAGLNPVFARTIGIAVDPR 346
RGF+L+E+RAA ++ ARTIGIAVDPR
Sbjct: 71 RGFSLKELRAAKIDKNLARTIGIAVDPR 98
>UniRef50_UPI0000DC2213 Cluster: UPI0000DC2213 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC2213 UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 77.8 bits (183), Expect = 2e-13
Identities = 34/47 (72%), Positives = 40/47 (85%)
Frame = +2
Query: 206 LRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 346
+RPIVRCPTVRYHTKVR GRGF+L EIR AG++ ARTI I+VDP+
Sbjct: 13 IRPIVRCPTVRYHTKVRGGRGFSLEEIRLAGIHKKMARTIDISVDPK 59
>UniRef50_Q4N9B5 Cluster: 60S ribosomal protein L13e, putative; n=4;
Piroplasmida|Rep: 60S ribosomal protein L13e, putative -
Theileria parva
Length = 205
Score = 76.2 bits (179), Expect = 6e-13
Identities = 43/104 (41%), Positives = 58/104 (55%)
Frame = +2
Query: 47 MGKGNNMXPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRC 226
M K NNM + H K RFVK NQ ++ RR+ R LRP+V
Sbjct: 1 MVKHNNMLSDVHRVKCSHRFVKPVLNQAGKKKRRRLAR-QRKAAASGLTPTGYLRPLVHM 59
Query: 227 PTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR*TQQ 358
P+ RY+ K+R GRGFTL+E++ AGL AR++G+AVD R T +
Sbjct: 60 PSRRYNYKLRFGRGFTLQELKVAGLGKKVARSVGVAVDHRRTNK 103
Score = 53.6 bits (123), Expect = 4e-06
Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Frame = +3
Query: 354 NKSVESLQINVQRIKEYRARLILFPKGKKVLKGEA-------NEEERKLA--TQLRGPLM 506
NK ESL +NV R+K Y ++L+LFP+ K KG A E+ R LA Q +M
Sbjct: 102 NKCAESLNLNVNRLKTYLSKLVLFPRKKHAKKGFAGLPSDTPREKLRTLALTKQSVKKVM 161
Query: 507 PVQQPAPKSXARPITEXEKNFKAYQYLXGARSIAK 611
PV Q K R +TE + + Y L AR AK
Sbjct: 162 PVVQEFVKEPPREVTEKDTSVNVYHKLRVARKAAK 196
>UniRef50_Q9AW85 Cluster: 60S ribosomal protein L13; n=1; Guillardia
theta|Rep: 60S ribosomal protein L13 - Guillardia theta
(Cryptomonas phi)
Length = 127
Score = 68.1 bits (159), Expect = 2e-10
Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Frame = +2
Query: 77 GHFHKDWQRFVKTWFNQPARRY-RRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKV 253
GHF K W+ V T FNQP + RRK + L+P+V+CPT ++TK+
Sbjct: 10 GHFRKKWKNLVITNFNQPILKIKRRKIRKNKKKNFLKKAIFYKKLKPLVKCPTRMHNTKI 69
Query: 254 RAGRGFTLREIRAAGLNPVFARTIGIAVDPR 346
+ GRGF+++EI+ + + A + GI++D R
Sbjct: 70 KLGRGFSIQEIKKSMIKLKTATSYGISIDKR 100
>UniRef50_Q8SSC1 Cluster: 60S RIBOSOMAL PROTEIN L13; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L13
- Encephalitozoon cuniculi
Length = 163
Score = 66.1 bits (154), Expect = 6e-10
Identities = 38/98 (38%), Positives = 48/98 (48%)
Frame = +2
Query: 53 KGNNMXPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPT 232
KGN+ PN HF K + + P + R + LRPIVRCPT
Sbjct: 2 KGNHALPNNHFRKTSLKI--RIHHDPETKARVMAEKKLRKAKALFPMPLKKLRPIVRCPT 59
Query: 233 VRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 346
++Y+ R GRGFT E AGL+ AR +GIAVD R
Sbjct: 60 IKYNRNERLGRGFTAAECEKAGLDYRHARRLGIAVDLR 97
>UniRef50_O14377 Cluster: Putative uncharacterized protein; n=1;
Schizosaccharomyces pombe|Rep: Putative uncharacterized
protein - Schizosaccharomyces pombe (Fission yeast)
Length = 70
Score = 58.8 bits (136), Expect = 1e-07
Identities = 21/27 (77%), Positives = 24/27 (88%)
Frame = +2
Query: 71 PNGHFHKDWQRFVKTWFNQPARRYRRK 151
PN HFHKDWQR+VKTWFNQP R+ RR+
Sbjct: 13 PNAHFHKDWQRYVKTWFNQPGRKLRRQ 39
>UniRef50_UPI00005A0D5A Cluster: PREDICTED: similar to ribosomal
protein L13 isoform 4; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to ribosomal protein L13 isoform 4 -
Canis familiaris
Length = 102
Score = 52.0 bits (119), Expect = 1e-05
Identities = 21/30 (70%), Positives = 22/30 (73%)
Frame = +2
Query: 59 NNMXPNGHFHKDWQRFVKTWFNQPARRYRR 148
N M HFHKDWQR V TWFNQPAR+ RR
Sbjct: 6 NGMILKPHFHKDWQRRVATWFNQPARKIRR 35
>UniRef50_Q018B3 Cluster: Chromosome 05 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 05 contig 1, DNA
sequence - Ostreococcus tauri
Length = 527
Score = 41.1 bits (92), Expect = 0.021
Identities = 23/46 (50%), Positives = 24/46 (52%)
Frame = -2
Query: 321 VRANTGFNPAALISRRVNPLPARTLVWYRTVGHRTIGRNGPAAGRG 184
VRA T S V P P R L YR VG TIGR+ PA GRG
Sbjct: 398 VRARTMAITRTFNSSSVKPRPRRVLKLYRCVGGCTIGRSAPATGRG 443
>UniRef50_Q6LAB9 Cluster: 60S ribosomal protein L13; n=1;
Arabidopsis thaliana|Rep: 60S ribosomal protein L13 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 87
Score = 39.9 bits (89), Expect = 0.048
Identities = 16/32 (50%), Positives = 24/32 (75%)
Frame = +2
Query: 206 LRPIVRCPTVRYHTKVRAGRGFTLREIRAAGL 301
LRP+V T++Y+ KV +GFTL E++AAG+
Sbjct: 52 LRPVVHGQTLKYNMKVSTXKGFTLEELKAAGI 83
>UniRef50_A2YRI3 Cluster: 60S ribosomal protein L13; n=2; Oryza
sativa|Rep: 60S ribosomal protein L13 - Oryza sativa
subsp. indica (Rice)
Length = 138
Score = 38.7 bits (86), Expect = 0.11
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = +2
Query: 212 PIVRCPTVRYHTKVRAGRGFTLREIR 289
PIV+C T++Y+ K RAGRGF L E++
Sbjct: 47 PIVQCQTLKYNMKSRAGRGFILEELK 72
>UniRef50_Q8ZWS7 Cluster: 60S ribosomal protein L13; n=4;
Pyrobaculum|Rep: 60S ribosomal protein L13 - Pyrobaculum
aerophilum
Length = 159
Score = 38.7 bits (86), Expect = 0.11
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Frame = +2
Query: 209 RPIVRCPTVRYH---TKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 346
+P+V+ P H K + GRGF++ E+RA GL+ AR +GI VD R
Sbjct: 6 KPLVKTPAKITHGGVVKWKYGRGFSIGELRALGLSVDQARLLGIPVDER 54
>UniRef50_Q9YEN9 Cluster: 50S ribosomal protein L13e; n=3;
Desulfurococcales|Rep: 50S ribosomal protein L13e -
Aeropyrum pernix
Length = 80
Score = 35.5 bits (78), Expect = 1.0
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +2
Query: 251 VRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 346
VR GRGF+L E+ AGL+ AR +G+ VD R
Sbjct: 23 VRRGRGFSLGELAEAGLDAKKARKLGLHVDTR 54
>UniRef50_A3H6W8 Cluster: Ribosomal protein L13; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L13 -
Caldivirga maquilingensis IC-167
Length = 144
Score = 34.3 bits (75), Expect = 2.4
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +2
Query: 248 KVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 346
K++ GRGF++ EI+A L AR +GI VD R
Sbjct: 17 KMKQGRGFSISEIKAINLTVNEARLLGIPVDTR 49
>UniRef50_UPI0000E49D21 Cluster: PREDICTED: similar to LOC495497
protein; n=3; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to LOC495497 protein -
Strongylocentrotus purpuratus
Length = 802
Score = 33.9 bits (74), Expect = 3.2
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = -1
Query: 298 SCGPNFTKSESSTGAYFSMVPNSWASHYRT*RPS-CRTWSYGLSFLYSILLSAVSSSWLV 122
SC P+ T S ST + P +H+ T P C WS+ SF Y A L
Sbjct: 367 SCPPSSTSS--STSSKQETPPCPVDNHFETGPPEKCHKWSFIFSFTYLAFFRAAGYFGLE 424
Query: 121 KP-SFNKSLPILVEMSI 74
KP SF+ + +L+ + +
Sbjct: 425 KPTSFSNVVQLLLTLKL 441
>UniRef50_Q97W05 Cluster: 50S ribosomal protein L13e; n=2;
Sulfolobus solfataricus|Rep: 50S ribosomal protein L13e
- Sulfolobus solfataricus
Length = 79
Score = 33.9 bits (74), Expect = 3.2
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +2
Query: 254 RAGRGFTLREIRAAGLNPVFARTIGIAVDPR 346
R GRGF++ E+ AGLN AR +GI VD R
Sbjct: 25 RIGRGFSVGELEKAGLNINKARKLGIFVDIR 55
>UniRef50_Q0UNB4 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 365
Score = 33.5 bits (73), Expect = 4.2
Identities = 21/54 (38%), Positives = 27/54 (50%)
Frame = +3
Query: 426 PKGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSXARPITEXEKNFKAYQYL 587
PKGKK K A EEE +A Q+ P+ PV K ++E +K YQ L
Sbjct: 297 PKGKKQKKKSAVEEEGSVAPQVAQPVKPVH--IDKFVRPTVSENKKPSSRYQIL 348
>UniRef50_Q74E61 Cluster: Long-chain-fatty-acid--CoA ligase,
putative; n=37; cellular organisms|Rep:
Long-chain-fatty-acid--CoA ligase, putative - Geobacter
sulfurreducens
Length = 552
Score = 32.3 bits (70), Expect = 9.7
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -2
Query: 435 CLSGTV*DALCIPLFFEH*F-AMIQQTCCVXRGSTAIPI 322
C+ T D LCIP+ F H F ++ CV G+T +P+
Sbjct: 225 CMKFTEKDRLCIPVPFFHCFGCVLGVMACVTHGTTMVPV 263
>UniRef50_A1RY56 Cluster: 60S ribosomal protein L13; n=1;
Thermofilum pendens Hrk 5|Rep: 60S ribosomal protein L13
- Thermofilum pendens (strain Hrk 5)
Length = 157
Score = 32.3 bits (70), Expect = 9.7
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 251 VRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 346
++ GRGF+ E++A GL AR +GI VD R
Sbjct: 30 LKVGRGFSEGEVKALGLTVKEARLLGIYVDER 61
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 581,823,658
Number of Sequences: 1657284
Number of extensions: 10937509
Number of successful extensions: 28208
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 27460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28186
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45636850930
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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