Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_H08
         (625 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   4.8  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   4.8  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   4.8  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    22   4.8  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    22   4.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.3  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   6.3  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   6.3  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 540 RPITEXEKNFKAYQYLXGARSI 605
           + +TE EK F   +YL  AR I
Sbjct: 263 KQLTELEKEFHFNKYLTRARRI 284


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/33 (24%), Positives = 19/33 (57%)
 Frame = -3

Query: 473 TFFFIGLTLQHLFAFREQYETRSVFLYSLNIDL 375
           T+F   ++  H+FA  E    +++ L ++N+ +
Sbjct: 189 TYFLGNMSFAHIFALVEYDIFKALVLQTINLQI 221


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/33 (24%), Positives = 19/33 (57%)
 Frame = -3

Query: 473 TFFFIGLTLQHLFAFREQYETRSVFLYSLNIDL 375
           T+F   ++  H+FA  E    +++ L ++N+ +
Sbjct: 189 TYFLGNMSFAHIFALVEYDIFKALVLQTINLQI 221


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 540 RPITEXEKNFKAYQYLXGARSI 605
           + +TE EK F   +YL  AR I
Sbjct: 52  KQLTELEKEFHFNKYLTRARRI 73


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 540 RPITEXEKNFKAYQYLXGARSI 605
           + +TE EK F   +YL  AR I
Sbjct: 52  KQLTELEKEFHFNKYLTRARRI 73


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 6/15 (40%), Positives = 8/15 (53%)
 Frame = +2

Query: 80   HFHKDWQRFVKTWFN 124
            H H DW     TW++
Sbjct: 1030 HMHPDWTTKPSTWWS 1044


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 14  FSLPW*NSDVKMGKGNNMXPNG 79
           F+  W  SDV + +G +  P G
Sbjct: 447 FNTFWQQSDVDLSRGMDFQPRG 468


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 172 SFLYSILLSAVSSSW 128
           SF+ S+L S V+S W
Sbjct: 102 SFMTSVLFSQVASRW 116


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,377
Number of Sequences: 336
Number of extensions: 2686
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)