Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_H08
(625 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X64707-1|CAA45963.1| 211|Homo sapiens BBC1 protein. 126 5e-29
BC106058-1|AAI06059.1| 211|Homo sapiens ribosomal protein L13 p... 126 5e-29
BC093063-1|AAH93063.1| 211|Homo sapiens RPL13 protein protein. 126 5e-29
BC063378-1|AAH63378.1| 211|Homo sapiens ribosomal protein L13 p... 126 5e-29
BC027463-1|AAH27463.1| 211|Homo sapiens ribosomal protein L13 p... 126 5e-29
BC020804-1|AAH20804.1| 211|Homo sapiens RPL13 protein protein. 126 5e-29
BC014167-1|AAH14167.1| 211|Homo sapiens ribosomal protein L13 p... 126 5e-29
BC013078-1|AAH13078.1| 211|Homo sapiens ribosomal protein L13 p... 126 5e-29
BC010994-1|AAH10994.1| 211|Homo sapiens ribosomal protein L13 p... 126 5e-29
BC007805-1|AAH07805.1| 211|Homo sapiens ribosomal protein L13 p... 126 5e-29
BC007563-1|AAH07563.1| 211|Homo sapiens ribosomal protein L13 p... 126 5e-29
BC007345-1|AAH07345.1| 211|Homo sapiens ribosomal protein L13 p... 126 5e-29
BC004954-1|AAH04954.1| 211|Homo sapiens RPL13 protein protein. 126 5e-29
AB062392-1|BAB93479.1| 211|Homo sapiens ribosomal protein L13 p... 126 5e-29
BC066320-1|AAH66320.1| 211|Homo sapiens ribosomal protein L13 p... 123 4e-28
AB007172-1|BAA25832.1| 65|Homo sapiens ribosomal protein L13 p... 58 3e-08
>X64707-1|CAA45963.1| 211|Homo sapiens BBC1 protein.
Length = 211
Score = 126 bits (305), Expect = 5e-29
Identities = 58/96 (60%), Positives = 67/96 (69%)
Frame = +2
Query: 59 NNMXPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 238
N M HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 239 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 346
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPR
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPR 101
Score = 103 bits (246), Expect = 7e-22
Identities = 55/91 (60%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
Frame = +3
Query: 354 NKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 530
NKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQTNVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 531 SXARPITEXEKNFKAYQYLXGARSIAKLVGI 623
AR ITE EKNFKA+ L AR+ A+L GI
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGI 194
>BC106058-1|AAI06059.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 126 bits (305), Expect = 5e-29
Identities = 58/96 (60%), Positives = 67/96 (69%)
Frame = +2
Query: 59 NNMXPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 238
N M HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 239 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 346
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPR
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPR 101
Score = 103 bits (246), Expect = 7e-22
Identities = 55/91 (60%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
Frame = +3
Query: 354 NKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 530
NKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 531 SXARPITEXEKNFKAYQYLXGARSIAKLVGI 623
AR ITE EKNFKA+ L AR+ A+L GI
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGI 194
>BC093063-1|AAH93063.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 126 bits (305), Expect = 5e-29
Identities = 58/96 (60%), Positives = 67/96 (69%)
Frame = +2
Query: 59 NNMXPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 238
N M HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 239 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 346
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPR
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPR 101
Score = 103 bits (246), Expect = 7e-22
Identities = 55/91 (60%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
Frame = +3
Query: 354 NKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 530
NKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQTNVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 531 SXARPITEXEKNFKAYQYLXGARSIAKLVGI 623
AR ITE EKNFKA+ L AR+ A+L GI
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGI 194
>BC063378-1|AAH63378.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 126 bits (305), Expect = 5e-29
Identities = 58/96 (60%), Positives = 67/96 (69%)
Frame = +2
Query: 59 NNMXPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 238
N M HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 239 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 346
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPR
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPR 101
Score = 103 bits (246), Expect = 7e-22
Identities = 55/91 (60%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
Frame = +3
Query: 354 NKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 530
NKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 531 SXARPITEXEKNFKAYQYLXGARSIAKLVGI 623
AR ITE EKNFKA+ L AR+ A+L GI
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGI 194
>BC027463-1|AAH27463.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 126 bits (305), Expect = 5e-29
Identities = 58/96 (60%), Positives = 67/96 (69%)
Frame = +2
Query: 59 NNMXPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 238
N M HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 239 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 346
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPR
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPR 101
Score = 103 bits (246), Expect = 7e-22
Identities = 55/91 (60%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
Frame = +3
Query: 354 NKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 530
NKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 531 SXARPITEXEKNFKAYQYLXGARSIAKLVGI 623
AR ITE EKNFKA+ L AR+ A+L GI
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGI 194
>BC020804-1|AAH20804.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 126 bits (305), Expect = 5e-29
Identities = 58/96 (60%), Positives = 67/96 (69%)
Frame = +2
Query: 59 NNMXPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 238
N M HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 239 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 346
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPR
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPR 101
Score = 103 bits (246), Expect = 7e-22
Identities = 55/91 (60%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
Frame = +3
Query: 354 NKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 530
NKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 531 SXARPITEXEKNFKAYQYLXGARSIAKLVGI 623
AR ITE EKNFKA+ L AR+ A+L GI
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGI 194
>BC014167-1|AAH14167.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 126 bits (305), Expect = 5e-29
Identities = 58/96 (60%), Positives = 67/96 (69%)
Frame = +2
Query: 59 NNMXPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 238
N M HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 239 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 346
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPR
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPR 101
Score = 103 bits (246), Expect = 7e-22
Identities = 55/91 (60%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
Frame = +3
Query: 354 NKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 530
NKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 531 SXARPITEXEKNFKAYQYLXGARSIAKLVGI 623
AR ITE EKNFKA+ L AR+ A+L GI
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGI 194
>BC013078-1|AAH13078.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 126 bits (305), Expect = 5e-29
Identities = 58/96 (60%), Positives = 67/96 (69%)
Frame = +2
Query: 59 NNMXPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 238
N M HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 239 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 346
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPR
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPR 101
Score = 103 bits (246), Expect = 7e-22
Identities = 55/91 (60%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
Frame = +3
Query: 354 NKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 530
NKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 531 SXARPITEXEKNFKAYQYLXGARSIAKLVGI 623
AR ITE EKNFKA+ L AR+ A+L GI
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGI 194
>BC010994-1|AAH10994.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 126 bits (305), Expect = 5e-29
Identities = 58/96 (60%), Positives = 67/96 (69%)
Frame = +2
Query: 59 NNMXPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 238
N M HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 239 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 346
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPR
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPR 101
Score = 103 bits (246), Expect = 7e-22
Identities = 55/91 (60%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
Frame = +3
Query: 354 NKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 530
NKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 531 SXARPITEXEKNFKAYQYLXGARSIAKLVGI 623
AR ITE EKNFKA+ L AR+ A+L GI
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGI 194
>BC007805-1|AAH07805.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 126 bits (305), Expect = 5e-29
Identities = 58/96 (60%), Positives = 67/96 (69%)
Frame = +2
Query: 59 NNMXPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 238
N M HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 239 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 346
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPR
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPR 101
Score = 103 bits (246), Expect = 7e-22
Identities = 55/91 (60%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
Frame = +3
Query: 354 NKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 530
NKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 531 SXARPITEXEKNFKAYQYLXGARSIAKLVGI 623
AR ITE EKNFKA+ L AR+ A+L GI
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGI 194
>BC007563-1|AAH07563.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 126 bits (305), Expect = 5e-29
Identities = 58/96 (60%), Positives = 67/96 (69%)
Frame = +2
Query: 59 NNMXPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 238
N M HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 239 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 346
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPR
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPR 101
Score = 103 bits (246), Expect = 7e-22
Identities = 55/91 (60%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
Frame = +3
Query: 354 NKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 530
NKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 531 SXARPITEXEKNFKAYQYLXGARSIAKLVGI 623
AR ITE EKNFKA+ L AR+ A+L GI
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGI 194
>BC007345-1|AAH07345.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 126 bits (305), Expect = 5e-29
Identities = 58/96 (60%), Positives = 67/96 (69%)
Frame = +2
Query: 59 NNMXPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 238
N M HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 239 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 346
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPR
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPR 101
Score = 103 bits (246), Expect = 7e-22
Identities = 55/91 (60%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
Frame = +3
Query: 354 NKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 530
NKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 531 SXARPITEXEKNFKAYQYLXGARSIAKLVGI 623
AR ITE EKNFKA+ L AR+ A+L GI
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGI 194
>BC004954-1|AAH04954.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 126 bits (305), Expect = 5e-29
Identities = 58/96 (60%), Positives = 67/96 (69%)
Frame = +2
Query: 59 NNMXPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 238
N M HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 239 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 346
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPR
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPR 101
Score = 103 bits (246), Expect = 7e-22
Identities = 55/91 (60%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
Frame = +3
Query: 354 NKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 530
NKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 531 SXARPITEXEKNFKAYQYLXGARSIAKLVGI 623
AR ITE EKNFKA+ L AR+ A+L GI
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGI 194
>AB062392-1|BAB93479.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 126 bits (305), Expect = 5e-29
Identities = 58/96 (60%), Positives = 67/96 (69%)
Frame = +2
Query: 59 NNMXPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 238
N M HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 239 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 346
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPR
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPR 101
Score = 103 bits (246), Expect = 7e-22
Identities = 55/91 (60%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
Frame = +3
Query: 354 NKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 530
NKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 531 SXARPITEXEKNFKAYQYLXGARSIAKLVGI 623
AR ITE EKNFKA+ L AR+ A+L GI
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGI 194
>BC066320-1|AAH66320.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 123 bits (297), Expect = 4e-28
Identities = 57/96 (59%), Positives = 66/96 (68%)
Frame = +2
Query: 59 NNMXPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVR 238
N M HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRC TVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCTTVR 65
Query: 239 YHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 346
YHTKVRAGRGF+L E+R AG++ ARTIGI+VDPR
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPR 101
Score = 103 bits (246), Expect = 7e-22
Identities = 55/91 (60%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
Frame = +3
Query: 354 NKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPK 530
NKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K
Sbjct: 104 NKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKK 163
Query: 531 SXARPITEXEKNFKAYQYLXGARSIAKLVGI 623
AR ITE EKNFKA+ L AR+ A+L GI
Sbjct: 164 EKARVITEEEKNFKAFASLRMARANARLFGI 194
>AB007172-1|BAA25832.1| 65|Homo sapiens ribosomal protein L13
protein.
Length = 65
Score = 57.6 bits (133), Expect = 3e-08
Identities = 30/50 (60%), Positives = 35/50 (70%)
Frame = +3
Query: 474 KLATQLRGPLMPVQQPAPKSXARPITEXEKNFKAYQYLXGARSIAKLVGI 623
KLATQL GP+MPV+ K AR ITE EKNFKA+ L AR+ A+L GI
Sbjct: 2 KLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMARANARLFGI 51
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,764,910
Number of Sequences: 237096
Number of extensions: 1657308
Number of successful extensions: 3586
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3571
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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