Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_H04
(653 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 295 6e-79
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 265 6e-70
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 239 3e-62
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 234 1e-60
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 234 2e-60
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 199 5e-50
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 190 3e-47
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 163 3e-39
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 151 1e-35
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 150 3e-35
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 140 4e-32
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 136 3e-31
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 135 8e-31
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 132 9e-30
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 132 9e-30
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 124 1e-27
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 124 2e-27
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 124 2e-27
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 123 3e-27
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 118 1e-25
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 116 7e-25
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 116 7e-25
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 114 2e-24
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 111 1e-23
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 111 2e-23
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 110 3e-23
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 109 4e-23
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 108 1e-22
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 107 2e-22
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 103 4e-21
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 97 2e-19
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 95 1e-18
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 94 3e-18
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 89 1e-16
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 85 1e-15
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 75 1e-12
UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n... 70 6e-11
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 68 2e-10
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 68 2e-10
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 66 5e-10
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 66 5e-10
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 66 7e-10
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 61 3e-08
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 61 3e-08
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 60 3e-08
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 60 6e-08
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 58 1e-07
UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n... 58 1e-07
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 58 1e-07
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 58 2e-07
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 58 2e-07
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 58 2e-07
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 57 4e-07
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 56 6e-07
UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2; Mycoplas... 56 6e-07
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 56 6e-07
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 54 2e-06
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 52 2e-05
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 51 2e-05
UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;... 51 3e-05
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 50 5e-05
UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3; Bacteria... 49 9e-05
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 49 9e-05
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 49 1e-04
UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;... 48 2e-04
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 48 2e-04
UniRef50_Q7MTN0 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 48 3e-04
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 47 5e-04
UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Re... 46 8e-04
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 46 8e-04
UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4; Ricketts... 46 0.001
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 45 0.001
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 45 0.001
UniRef50_A0CLK5 Cluster: Chromosome undetermined scaffold_20, wh... 45 0.001
UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1; ... 44 0.004
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 43 0.006
UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondr... 42 0.010
UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1; Neoricke... 42 0.010
UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1; N... 41 0.023
UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1; ... 40 0.052
UniRef50_Q7R438 Cluster: GLP_254_52826_53383; n=1; Giardia lambl... 39 0.091
UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1; ... 39 0.091
UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis gr... 39 0.091
UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1; ... 37 0.37
UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2... 36 1.1
UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium falciparu... 35 2.0
UniRef50_A6S1U3 Cluster: Putative uncharacterized protein; n=2; ... 35 2.0
UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial... 35 2.0
UniRef50_UPI0000F2DE4B Cluster: PREDICTED: similar to thioredoxi... 33 4.5
UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n... 33 6.0
UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella ve... 33 6.0
UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila pseudoobscu... 33 7.9
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 295 bits (724), Expect = 6e-79
Identities = 139/159 (87%), Positives = 147/159 (92%)
Frame = +2
Query: 176 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 355
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQ
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQ 113
Query: 356 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 535
KQTRAGQRTRFKAFVAIGD NGH+GLGVKCSKEVATAIRGAIILAKLS++PVRRGYWGNK
Sbjct: 114 KQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNK 173
Query: 536 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXK 652
IGKPHTVPCKVTG+CGSV VRLIPAPRGTGIVSAPVP K
Sbjct: 174 IGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKK 212
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 265 bits (650), Expect = 6e-70
Identities = 115/156 (73%), Positives = 143/156 (91%)
Frame = +2
Query: 176 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 355
++++KEWVPVTKLGRLV+ GKI +E IYL+SLPIKE++I+D+FL P LNDEV+K++PVQ
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGKIKSIEEIYLYSLPIKEYQIVDYFL-PRLNDEVMKVVPVQ 86
Query: 356 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 535
KQTRAGQRTRFKAFV IGD++GH+GLG+KC+KEVATAIRGAII+ KLS++P+RRGYWG
Sbjct: 87 KQTRAGQRTRFKAFVVIGDSDGHVGLGIKCAKEVATAIRGAIIMGKLSIMPIRRGYWGTA 146
Query: 536 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPV 643
+G PHTVP KV+GKCGSVTVRL+PAPRG G+V+APV
Sbjct: 147 LGDPHTVPVKVSGKCGSVTVRLVPAPRGAGLVAAPV 182
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 239 bits (586), Expect = 3e-62
Identities = 114/139 (82%), Positives = 121/139 (87%)
Frame = +2
Query: 197 VPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQ 376
+PVTKLG L+ + KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQKQT AGQ
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTCAGQ 60
Query: 377 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 556
TRFKAFV IGD NGH+GL VKCSKEVATAIRGAIILAKLS++PV RGYWGNKIGKPHTV
Sbjct: 61 HTRFKAFVPIGDYNGHVGLSVKCSKEVATAIRGAIILAKLSIVPVCRGYWGNKIGKPHTV 120
Query: 557 PCKVTGKCGSVTVRLIPAP 613
PCKVTG+C SV V LIPAP
Sbjct: 121 PCKVTGRCSSVLVHLIPAP 139
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 234 bits (573), Expect = 1e-60
Identities = 107/157 (68%), Positives = 130/157 (82%)
Frame = +2
Query: 182 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 361
++K WVPVTKLGRLV+ GKI +E I+L SLP+KEF+IID L P L DEV+ I PVQKQ
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEIFLHSLPVKEFQIIDTLL-PGLQDEVMNIKPVQKQ 89
Query: 362 TRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIG 541
TRAGQRTRFKA V +GD+NGH+GLG+K +KEVA AIR II+AKLSV+P+RRGYWG +G
Sbjct: 90 TRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEVAGAIRAGIIIAKLSVIPIRRGYWGTNLG 149
Query: 542 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXK 652
+PH++ K TGKCGSVTVRLIPAPRG+GIV++P K
Sbjct: 150 QPHSLATKTTGKCGSVTVRLIPAPRGSGIVASPAVKK 186
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 234 bits (572), Expect = 2e-60
Identities = 106/153 (69%), Positives = 130/153 (84%)
Frame = +2
Query: 179 EDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQK 358
+D+ WVP TKLGRLV++GKI LE I+LFSLPIKE +I++ F+G L DEV+KI PVQK
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKIKSLEHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQK 104
Query: 359 QTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKI 538
QT AGQR RFKAFV +GD NGHIGLGVK KEVA +I+G++ILAKL+++PVRRGYWG+K+
Sbjct: 105 QTTAGQRMRFKAFVVVGDCNGHIGLGVKACKEVAHSIQGSMILAKLNIVPVRRGYWGSKL 164
Query: 539 GKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSA 637
G+PHT+P KV GKCGSV VRLIPAPRG GIV++
Sbjct: 165 GEPHTIPTKVHGKCGSVHVRLIPAPRGAGIVAS 197
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 199 bits (485), Expect = 5e-50
Identities = 94/109 (86%), Positives = 100/109 (91%)
Frame = +2
Query: 326 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 505
DEVLKIMPVQKQT AGQRTRF AFVAIGD NGH GLGVKCSKEVATAIR AIILAKLS++
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAIILAKLSIV 107
Query: 506 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXK 652
P+R+GYWGNKIGKP+TVPCKVTG CGSV V LIPAPRGTG+VSAPVP K
Sbjct: 108 PLRQGYWGNKIGKPNTVPCKVTGHCGSVLVCLIPAPRGTGMVSAPVPKK 156
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 190 bits (463), Expect = 3e-47
Identities = 89/159 (55%), Positives = 113/159 (71%)
Frame = +2
Query: 176 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 355
++++ EW+P T +GRLV+ KI LE I+ FS I+E EI+D G S+ +EVL I VQ
Sbjct: 15 RKEESEWIPKTAVGRLVKMLKITSLEQIFKFSHVIREPEIVDLLCGNSIKEEVLSIKSVQ 74
Query: 356 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 535
KQTRAGQ+TR KA V +GD GH+G+G K SKE A+AIRGAI AK ++ PVR G W
Sbjct: 75 KQTRAGQKTRIKAVVVVGDRKGHVGIGTKASKEAASAIRGAIARAKCAIRPVRLGLWDGA 134
Query: 536 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXK 652
GKPHTV CK +GKCG+ V++IPAPRGTGI+S V K
Sbjct: 135 QGKPHTVSCKGSGKCGTSVVQVIPAPRGTGIISGSVNKK 173
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 163 bits (396), Expect = 3e-39
Identities = 75/92 (81%), Positives = 82/92 (89%)
Frame = +2
Query: 377 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 556
+ RFKAFVAIGD+NG +G GVKCSKE ATAIRGA+ILAKLS+LPV RGYWGN+I KPHTV
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVILAKLSILPVPRGYWGNEIRKPHTV 120
Query: 557 PCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXK 652
P KVTG+CGSV VRLIPAPRGTG VSAPVP K
Sbjct: 121 PGKVTGRCGSVLVRLIPAPRGTGFVSAPVPKK 152
Score = 33.5 bits (73), Expect = 4.5
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +2
Query: 182 DQKEWVPVTKLGRLVREGKI 241
+ KEW+PVT LGRLV++ KI
Sbjct: 43 EDKEWIPVTGLGRLVKDMKI 62
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 151 bits (366), Expect = 1e-35
Identities = 88/151 (58%), Positives = 104/151 (68%)
Frame = +2
Query: 200 PVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQR 379
P +KLG LV++ +I L IYLFSLPIKE EIID FLG +L DEVLK +P QK TR GQ
Sbjct: 51 PASKLGCLVKD-EIKSLGEIYLFSLPIKETEIIDIFLGAALKDEVLKSLPEQKGTRVGQ- 108
Query: 380 TRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVP 559
+KA GD NGH+ G+ EVA I+ IIL KL ++PV RGY G+K KPHTV
Sbjct: 109 -YYKA----GDYNGHVITGL---DEVANTIQRVIILTKLPIVPVWRGYCGSKTSKPHTVL 160
Query: 560 CKVTGKCGSVTVRLIPAPRGTGIVSAPVPXK 652
CKVTG GSV++ LIPAPR T I SAP+P K
Sbjct: 161 CKVTGH-GSVSLHLIPAPRDTVISSAPMPKK 190
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 150 bits (363), Expect = 3e-35
Identities = 71/86 (82%), Positives = 76/86 (88%)
Frame = +2
Query: 176 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 355
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQ
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQ 88
Query: 356 KQTRAGQRTRFKAFVAIGDNNGHIGL 433
KQTRAGQRTRFKAFVAIGD NGH+GL
Sbjct: 89 KQTRAGQRTRFKAFVAIGDYNGHVGL 114
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 140 bits (338), Expect = 4e-32
Identities = 71/154 (46%), Positives = 104/154 (67%), Gaps = 2/154 (1%)
Frame = +2
Query: 188 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTR 367
+EW P T +G LV+EGKI ++ ++ +LPI E EI+D L P L EV+ I VQKQT
Sbjct: 11 EEWKPRTSIGSLVKEGKISSIKELFDRNLPITEPEIVDVLL-PKLKYEVVDIKVVQKQTD 69
Query: 368 AGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNKIG 541
AG+ +R+K V +G+ +G++ +G +K++ AI+ AI AK++++PVRR G W G
Sbjct: 70 AGEISRYKVLVIMGNMDGYVSIGTGKAKQLRVAIQKAIRDAKMNIIPVRRGCGSWQCTCG 129
Query: 542 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPV 643
+PH++P KV GK GSV V L+PAP+GTG+V V
Sbjct: 130 EPHSLPFKVVGKAGSVEVDLLPAPKGTGLVVGSV 163
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 136 bits (330), Expect = 3e-31
Identities = 70/158 (44%), Positives = 101/158 (63%), Gaps = 2/158 (1%)
Frame = +2
Query: 176 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 355
K + + W P T++GR+V+EG I + I LP+ E EI+D L P L ++VL + VQ
Sbjct: 10 KFNTEAWEPKTQIGRMVKEGTISDISYIMDKGLPLLEPEIVDALL-PDLEEQVLDVKLVQ 68
Query: 356 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVR--RGYWG 529
+ ++G+R R++A V +G+ NG++G+G+ SKEV AIR AI AKLS++ VR G W
Sbjct: 69 RMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAHAKLSLIKVRVGCGSWE 128
Query: 530 NKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPV 643
G PH++P G CGSV V L+PAPRG G+V+ V
Sbjct: 129 CGCGSPHSIPFTAKGACGSVKVELLPAPRGVGLVAGNV 166
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 135 bits (327), Expect = 8e-31
Identities = 77/154 (50%), Positives = 98/154 (63%)
Frame = +2
Query: 185 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQT 364
+ +W+P+TKLG LV+E KI LE IY FSL + + F P+ KQT
Sbjct: 51 EDKWLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTFSWEH----------PLIKQT 100
Query: 365 RAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGK 544
Q+TRFKA V +G + GH+ LG+K S EVA IILAKLS++PV G ++ +
Sbjct: 101 CTDQQTRFKASVTVG-SYGHVSLGIKYSMEVA------IILAKLSIIPVETATGGKRL-E 152
Query: 545 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVP 646
PH VPC+VTG+CGS+ V LIPAPRGTG VSAPVP
Sbjct: 153 PHMVPCRVTGRCGSLLVHLIPAPRGTGTVSAPVP 186
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 132 bits (318), Expect = 9e-30
Identities = 73/160 (45%), Positives = 98/160 (61%), Gaps = 6/160 (3%)
Frame = +2
Query: 191 EWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLN----DEVLKIMPVQK 358
EW P TKLG +V+EG+I + I+ IKE EIID L P +N EVL I +
Sbjct: 15 EWEPKTKLGMMVKEGQITDIHEIFRRGYQIKEPEIIDVLL-PEVNARENQEVLDIALTVR 73
Query: 359 QTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGN 532
T +G+R RF+ A+G+ +G++GLG+ KEV AIR AI AKL+++ ++R G W
Sbjct: 74 MTDSGRRVRFRVLAAVGNRDGYVGLGIGHGKEVGIAIRKAINYAKLNIIEIKRGCGSWEC 133
Query: 533 KIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXK 652
+ +PH+VP V GK GSV VRLIP PRG G+V V K
Sbjct: 134 RCRRPHSVPFAVEGKEGSVRVRLIPGPRGLGLVIGDVGKK 173
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 132 bits (318), Expect = 9e-30
Identities = 65/154 (42%), Positives = 96/154 (62%), Gaps = 2/154 (1%)
Frame = +2
Query: 188 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTR 367
+EW P T+LGRLV G+I + LP+KE++I+D+ + P L DEV+ I Q+ T
Sbjct: 3 EEWTPRTELGRLVANGEIKTISEALHSKLPLKEYQIVDYLI-PDLKDEVINIERAQRMTD 61
Query: 368 AGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNKIG 541
+G+R + +G+ NG++G+G +KE A AI+ AI AKL+++ ++R G W G
Sbjct: 62 SGRRMNYSITAVVGNGNGYVGVGRGKAKEAAPAIKKAIDNAKLNIIEIKRGCGSWECGCG 121
Query: 542 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPV 643
KPHT+P V GK GSV+V L PAP+G G+ V
Sbjct: 122 KPHTLPFLVNGKSGSVSVTLKPAPQGVGLAVGDV 155
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 124 bits (300), Expect = 1e-27
Identities = 69/153 (45%), Positives = 94/153 (61%), Gaps = 2/153 (1%)
Frame = +2
Query: 182 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 361
+++ WVP T LG+ V G+I LE I L I+E II L P L EV+ + +QK
Sbjct: 42 EEEVWVPKTILGQKVASGEISSLEEIIELGLRIQEAGIIKKLL-PDLKSEVVDVGIIQKM 100
Query: 362 TRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNK 535
T GQ TRFKA VA G+ NG++G+G SK++ AI A A L+V P++ G W +
Sbjct: 101 TSNGQSTRFKAIVATGNENGYLGIGQGKSKQMRIAIEKATNAAYLNVNPIKMGCGSWECR 160
Query: 536 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 634
+ H+VP KV GK GSVT+ +IPAPRG G+V+
Sbjct: 161 CDQKHSVPFKVKGKGGSVTIEIIPAPRGLGLVA 193
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 124 bits (298), Expect = 2e-27
Identities = 59/72 (81%), Positives = 63/72 (87%)
Frame = +2
Query: 176 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 355
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQ
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQ 113
Query: 356 KQTRAGQRTRFK 391
KQTRAGQRTRFK
Sbjct: 114 KQTRAGQRTRFK 125
Score = 60.1 bits (139), Expect = 5e-08
Identities = 27/30 (90%), Positives = 28/30 (93%)
Frame = +2
Query: 563 KVTGKCGSVTVRLIPAPRGTGIVSAPVPXK 652
KVTG+CGSV VRLIPAPRGTGIVSAPVP K
Sbjct: 125 KVTGRCGSVLVRLIPAPRGTGIVSAPVPKK 154
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 124 bits (298), Expect = 2e-27
Identities = 66/155 (42%), Positives = 92/155 (59%), Gaps = 2/155 (1%)
Frame = +2
Query: 194 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAG 373
W P T+LG+ V EG+ID ++ LP+KE E++D + P L DEVL I VQ+ T +G
Sbjct: 7 WEPRTRLGKQVVEGEIDSMQEALNSGLPLKESEVVDQLV-PDLEDEVLDINMVQRMTDSG 65
Query: 374 QRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNKIGKP 547
+R +F+ VA+G+ +G IG +V AI+ AI +AKL+++ V R G W G+P
Sbjct: 66 RRVKFRCVVAVGNRDGLIGYAEGRDDQVGGAIQKAIDIAKLNIIDVSRGCGSWECGCGRP 125
Query: 548 HTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXK 652
HTV + GK GSV V L PAPRG G+ K
Sbjct: 126 HTVALRTEGKAGSVEVELQPAPRGLGLAGGETVRK 160
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 123 bits (297), Expect = 3e-27
Identities = 59/96 (61%), Positives = 78/96 (81%)
Frame = +2
Query: 185 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQT 364
++EWVP+TKLGRLV+ GKI LE+I+ FS+PIKE++I+D FL +L +E L I PVQKQT
Sbjct: 61 EQEWVPLTKLGRLVKGGKIKSLETIFQFSIPIKEYQIVDHFL-KTLKEEPLAIGPVQKQT 119
Query: 365 RAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 472
AGQ+TRFKA+V +GD++ HIGLG K +KEV AI+
Sbjct: 120 CAGQKTRFKAYVVVGDSHQHIGLGWKSAKEVQGAIQ 155
Score = 35.9 bits (79), Expect = 0.85
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +1
Query: 505 TSSKRLLG*QDRKATHRPLQGHRQVWFCNSPADSCPSWYW 624
+S KR+LG QDR TH P+Q R+ S S YW
Sbjct: 169 SSQKRILGKQDRLTTHSPMQSDRKGRISQSQIGSSTQRYW 208
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 118 bits (284), Expect = 1e-25
Identities = 63/150 (42%), Positives = 93/150 (62%), Gaps = 2/150 (1%)
Frame = +2
Query: 194 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAG 373
W P T+LGR V+ G I +E LP+KE EI+D L P L DEVL I VQ+ T +G
Sbjct: 58 WEPRTRLGRKVQNGDISSMEQALDSGLPLKEAEIVDQLL-PGLEDEVLDINMVQRMTDSG 116
Query: 374 QRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNKIGKP 547
+R +F+ VA+G+ +G++G +V AI+ AI +AKL+++ V R G W ++ G
Sbjct: 117 RRVKFRCVVAVGNRDGYLGYAQARDDQVGGAIQKAIDVAKLNIIEVDRGSGSWEDQPGGT 176
Query: 548 HTVPCKVTGKCGSVTVRLIPAPRGTGIVSA 637
+++ K GK GSVTV + PAP+G G+ +A
Sbjct: 177 NSLTRKAEGKAGSVTVEIQPAPQGLGLAAA 206
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 116 bits (278), Expect = 7e-25
Identities = 60/139 (43%), Positives = 88/139 (63%), Gaps = 2/139 (1%)
Frame = +2
Query: 221 LVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFV 400
+V +GKI E LPI+E EI+D L P L+D+VL + +Q+ T +G+R RF
Sbjct: 1 MVADGKILSYEEALATGLPIREVEIVDALL-PGLDDDVLAVNMIQRMTDSGRRVRFNVLC 59
Query: 401 AIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNKIGKPHTVPCKVTG 574
+G+++G++GL + KEVA+ IR AI AKL+++PV R G W + G +VP K+TG
Sbjct: 60 VVGNSDGYVGLAICKGKEVASTIRKAIDKAKLNMIPVMRGNGSWESGGGPGTSVPLKITG 119
Query: 575 KCGSVTVRLIPAPRGTGIV 631
+ GS V L+PAP G G+V
Sbjct: 120 RSGSTRVTLMPAPAGKGLV 138
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 116 bits (278), Expect = 7e-25
Identities = 65/153 (42%), Positives = 91/153 (59%), Gaps = 2/153 (1%)
Frame = +2
Query: 182 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 361
++ WVP T LG+ V G+I LE I I+E II L P L EV+ + +QK
Sbjct: 23 EEAPWVPKTALGKRVNAGEITSLEEIQEAGARIQESGIIKKLL-PDLKTEVVDVGIIQKM 81
Query: 362 TRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNK 535
T GQ TRFKA VA G+ NG++G+G +K++ AI A A L+V P++ G W +
Sbjct: 82 TSNGQSTRFKAIVAAGNENGYLGIGQGKAKQMRIAIEKANNQALLNVGPIKLGCGSWECR 141
Query: 536 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 634
+ H+VP KV GK GSV + ++PAPRG G+V+
Sbjct: 142 CDQKHSVPFKVRGKGGSVVIEILPAPRGLGLVA 174
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 114 bits (275), Expect = 2e-24
Identities = 67/164 (40%), Positives = 95/164 (57%), Gaps = 15/164 (9%)
Frame = +2
Query: 188 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPV----- 352
+EW P TKLGRLV+EGKI ++ I I+E EI+D L P+L E +K +
Sbjct: 5 EEWQPKTKLGRLVKEGKITNIDEILSNKYVIREPEIVDVLL-PNLEVEFMKWRIIRGKFR 63
Query: 353 --------QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLP 508
QK+T G +TR++ +GD +GH+G+G+ S ++ A AI AKL+++
Sbjct: 64 SKKPYRMAQKKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAINRAKLNIIK 123
Query: 509 VRR--GYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 634
V R G W G PH++P +V GK GSV V L PAP+G GIV+
Sbjct: 124 VARGCGSWECACGAPHSIPYQVEGKSGSVRVILKPAPKGVGIVA 167
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 111 bits (267), Expect = 1e-23
Identities = 76/160 (47%), Positives = 89/160 (55%), Gaps = 1/160 (0%)
Frame = +2
Query: 176 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 355
K + K WV + LG LV+E KI LES FS +II+FFLG L DEVL+ M Q
Sbjct: 18 KAEDKAWVFINNLGCLVKE-KIKSLESCSPFS----SSDIIEFFLGEHLKDEVLRTMLAQ 72
Query: 356 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 535
Q RTR K F + + L V CSKEV TA + AI L + + GY GNK
Sbjct: 73 NQ-----RTRIKVFFFLTIRSPMTTL-VNCSKEVGTAAQRAITLLSF-LFSTQTGYKGNK 125
Query: 536 IGKPHTVPCKVTG-KCGSVTVRLIPAPRGTGIVSAPVPXK 652
IG PHT+PC VT + V V L APRGTG VSA VP K
Sbjct: 126 IGNPHTIPCDVTATEKNLVLVCLTTAPRGTGTVSASVPKK 165
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 111 bits (266), Expect = 2e-23
Identities = 59/131 (45%), Positives = 85/131 (64%)
Frame = -2
Query: 568 DLARDGVWLSDLVTPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCL 389
+LA GV +DLVTPV S++ N QL +D+S ++G G FLAAL QT++ V V +G++ L
Sbjct: 18 NLAGHGVGFTDLVTPVASTHRNNGQLGQDDSPTDGGGHFLAALDAQTDVAVAVTDGDEGL 77
Query: 388 ETCALSGTCLFLYRHDL*NLIIQGRAEEEINDLEFFDW*RKQVNALEFVDFSFANKTAEF 209
E L+GT L L HDL + ++Q A+EEI+DLE F+ R QV+ L+ D + A++ +
Sbjct: 78 EARTLTGTGLLLDGHDLQHFVLQRAAQEEIDDLELFNGQRVQVDLLQGADLAIAHQATQL 137
Query: 208 GDRNPLFLVFL 176
G NP VFL
Sbjct: 138 GHWNPFLRVFL 148
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 110 bits (264), Expect = 3e-23
Identities = 62/118 (52%), Positives = 76/118 (64%)
Frame = +2
Query: 299 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 478
D L ++ + ++I +K+T AGQ+TRFKAFV D NGH+ L EVATAIRGA
Sbjct: 1 DMSLLAAVKGKGIRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSL------EVATAIRGA 54
Query: 479 IILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXK 652
IIL + S+ G+ GNKI KPHTV C+VT SV V I APRGT I+SAPVP K
Sbjct: 55 IILDRSSIAIAWGGWSGNKIAKPHTVSCRVTRLYCSVLVHHISAPRGTDILSAPVPKK 112
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 109 bits (263), Expect = 4e-23
Identities = 53/72 (73%), Positives = 58/72 (80%)
Frame = +2
Query: 176 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 355
K + KEW+P TKLG LV++ KI LE IYLFSLPIK EIIDFFLG SL +EVLK MPVQ
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLEEIYLFSLPIKGSEIIDFFLGASLKNEVLKTMPVQ 113
Query: 356 KQTRAGQRTRFK 391
KQTRAGQ TRFK
Sbjct: 114 KQTRAGQWTRFK 125
Score = 55.2 bits (127), Expect = 1e-06
Identities = 25/30 (83%), Positives = 26/30 (86%)
Frame = +2
Query: 563 KVTGKCGSVTVRLIPAPRGTGIVSAPVPXK 652
KVTG+CGSV VRL APRGTGIVSAPVP K
Sbjct: 125 KVTGRCGSVLVRLFSAPRGTGIVSAPVPKK 154
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 108 bits (259), Expect = 1e-22
Identities = 53/65 (81%), Positives = 56/65 (86%)
Frame = +2
Query: 236 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 415
KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPV+K+TRAGQRTRFKAFVAI D
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDY 61
Query: 416 NGHIG 430
NG+ G
Sbjct: 62 NGYAG 66
Score = 46.8 bits (106), Expect = 5e-04
Identities = 26/73 (35%), Positives = 35/73 (47%)
Frame = +1
Query: 409 RQQRSYWFGCEVQQGSRHCHSRRYYPC*VVCFTSSKRLLG*QDRKATHRPLQGHRQVWFC 588
R Y EV QG H R ++P + ++RLLG QDR+A HRPLQG R + C
Sbjct: 59 RDYNGYAGRVEVLQGGGRRHPRGHHPDQALHCHRAQRLLGEQDRQAPHRPLQGDRPLRLC 118
Query: 589 NSPADSCPSWYWN 627
+W+
Sbjct: 119 AGALHPRAQGHWH 131
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 107 bits (258), Expect = 2e-22
Identities = 50/130 (38%), Positives = 85/130 (65%)
Frame = +2
Query: 248 LESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHI 427
L+ ++L + ++++ G SL +V++ + V + T++G++ + K V +GD +GH+
Sbjct: 84 LDYLFLKRIFFHNNKLVNILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHV 143
Query: 428 GLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIP 607
GLGVK S + I+ A+ AKL++ +RRGYW + GKP+T+ K +GK GSV V + P
Sbjct: 144 GLGVKSSMDSKAGIKAALRKAKLAITKIRRGYWEIEEGKPNTIKYKTSGKAGSVVVCIKP 203
Query: 608 APRGTGIVSA 637
AP+GTGIV++
Sbjct: 204 APKGTGIVAS 213
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 103 bits (247), Expect = 4e-21
Identities = 61/159 (38%), Positives = 96/159 (60%), Gaps = 2/159 (1%)
Frame = -2
Query: 652 LXRNWRRHNSSTTRGRNQPDCYRTTLAGDLARDGVWLSDLVTPVTSSNW*NRQLSKDNSA 473
L +W ++ T+ NQ + TTL L GV L+ + TPVTSS+W N QL D++
Sbjct: 71 LLDSWGGDDTGTSWSWNQSNGNGTTLTRGLGSQGVRLTQVGTPVTSSDWDNGQLGDDDTG 130
Query: 472 SNGSGDFLAALHTQTNMTVVVANGNKCLETCALSGTCLFLYRHDL*NLIIQGRAEEEIND 293
S+G+ +FL+ L+TQT++TV V N + LE+ +L+ + L L R D+ N I+Q ++ +ND
Sbjct: 131 SDGTSNFLSGLNTQTDVTVGVTNDDDSLESGSLTSSGLLLDRLDVHNFILQ-VWQQLVND 189
Query: 292 LEFFDW*RKQVNALEFVDFSFANKTAEFGDRNP--LFLV 182
LEF DW R Q + + D + +++ + G+ NP FLV
Sbjct: 190 LEFLDWQRVQEDFFDGRDLAGLHQSTQLGNWNPTLFFLV 228
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 97.5 bits (232), Expect = 2e-19
Identities = 52/100 (52%), Positives = 62/100 (62%)
Frame = +2
Query: 353 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGN 532
QKQT+ GQ+ R K F GD NGH+GLG+KCSKEVATA +G + +L
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQGLWVKMQLG---------ET 51
Query: 533 KIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXK 652
++ + V KVT GSV V LIPAPRGTGIVSAPV K
Sbjct: 52 RLSRSTLVQYKVTSHYGSVLVHLIPAPRGTGIVSAPVLTK 91
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 95.5 bits (227), Expect = 1e-18
Identities = 65/127 (51%), Positives = 80/127 (62%), Gaps = 1/127 (0%)
Frame = +2
Query: 197 VPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQ 376
+PVTKLG LV++ KI L P+KEFEI DFFL SL D+VLKI+P+ + R Q
Sbjct: 1 IPVTKLGCLVKDIKIKYL--------PVKEFEINDFFLEASLKDKVLKIIPLSR-FRNDQ 51
Query: 377 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL-SVLPVRRGYWGNKIGKPHT 553
TRF +F I + GH G+GVKCSK+V TA+ + + L S LP R Y GN I KP T
Sbjct: 52 WTRFNSFDTI-NYGGHNGIGVKCSKKVGTAVGLSSWSSFLSSCLP--RDYCGNNIRKP-T 107
Query: 554 VPCKVTG 574
PCK TG
Sbjct: 108 YPCKRTG 114
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 93.9 bits (223), Expect = 3e-18
Identities = 73/157 (46%), Positives = 88/157 (56%)
Frame = +2
Query: 182 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 361
+ K+W+PV KL LVR + L FSL K+ II FFL SL DE IMPVQ Q
Sbjct: 59 EDKQWMPVIKLCHLVRTWRYRDLP----FSLLNKKSMIIGFFLRTSLRDE---IMPVQTQ 111
Query: 362 TRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIG 541
T R FK FV+I D + H+ L KCSK+ ATAI VL V +G ++G
Sbjct: 112 TWLPSRP-FKDFVSIRDYSSHVDLDDKCSKKTATAI----------VL-VWKGTRETRLG 159
Query: 542 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXK 652
TV CKVTG+C SV + LIP R I+SAPVP K
Sbjct: 160 S-LTVSCKVTGQCVSVLICLIPPTR--NIISAPVPKK 193
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 88.6 bits (210), Expect = 1e-16
Identities = 46/93 (49%), Positives = 64/93 (68%)
Frame = +2
Query: 224 VREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVA 403
V++ K+ L+ +YLFSLPIKEFE+ DF LG L D+VLK+M VQKQ +AG+R RFK V
Sbjct: 132 VKDMKMKSLK-VYLFSLPIKEFEVTDFLLGVPLKDKVLKLMFVQKQPKAGRRIRFKVIVT 190
Query: 404 IGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 502
I D N ++ LGV+ KE+ A+ +L+ + V
Sbjct: 191 IRDCNDNVSLGVEWPKELLIAVCRTNVLSIILV 223
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 85.0 bits (201), Expect = 1e-15
Identities = 41/78 (52%), Positives = 55/78 (70%)
Frame = +2
Query: 200 PVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQR 379
PVTKLGRLV++GK+ ++ I+ F + IKE++I+D L L +EV+ I VQKQT G+
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEFGIKIKEYQIVDHLLS-RLKEEVMTIDQVQKQTSRGKE 94
Query: 380 TRFKAFVAIGDNNGHIGL 433
R KA VAIGD+NGH L
Sbjct: 95 PRLKASVAIGDHNGHRAL 112
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 74.9 bits (176), Expect = 1e-12
Identities = 42/84 (50%), Positives = 54/84 (64%)
Frame = +2
Query: 236 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 415
KI L+ +YLFS PIKEFE+ DF L L D+VLK+M V+KQ AG+ RFK V I
Sbjct: 2 KIKSLK-VYLFSRPIKEFEVTDFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYC 60
Query: 416 NGHIGLGVKCSKEVATAIRGAIIL 487
N ++ LGV+ KE+ A+ IIL
Sbjct: 61 NDNVSLGVERPKELLIAVCRTIIL 84
>UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000502977 UniRef100 entry -
Rattus norvegicus
Length = 140
Score = 69.7 bits (163), Expect = 6e-11
Identities = 33/42 (78%), Positives = 33/42 (78%)
Frame = +2
Query: 527 GNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPXK 652
GNKIGK H V CKVTG CGSV V LIPA RGTGI SAPVP K
Sbjct: 7 GNKIGKTHIVLCKVTGCCGSVLVHLIPAHRGTGISSAPVPTK 48
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 68.1 bits (159), Expect = 2e-10
Identities = 37/108 (34%), Positives = 62/108 (57%)
Frame = +2
Query: 311 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 490
GP ++VL++ + K + G+ F+A VA+GD NG IGLG +KEV A+ A + A
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEVMVAVEKASMEA 127
Query: 491 KLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 634
K + + V I K +++P ++ + G+ +V + PA GTG+V+
Sbjct: 128 KKTAITV-------PITKDYSLPHRLDVEWGAASVMMKPASVGTGLVA 168
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 68.1 bits (159), Expect = 2e-10
Identities = 39/106 (36%), Positives = 60/106 (56%)
Frame = +2
Query: 317 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 496
+ + V+KI + K T+ G+ RF A V IGD NG +G G+ S EV AI+ AI A
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANN 107
Query: 497 SVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 634
+++ V++ K ++ V G+ G+ V L+PAP GTGI++
Sbjct: 108 NLIKVKQ-------TKKGSIYHDVNGRHGAAKVMLLPAPEGTGIIA 146
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 66.5 bits (155), Expect = 5e-10
Identities = 37/105 (35%), Positives = 60/105 (57%)
Frame = +2
Query: 320 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 499
L ++++ + + K T+ G+ RF A IGD G++G G+ S EV AIR A+ AK +
Sbjct: 78 LEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVAIRKALKSAKNN 137
Query: 500 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 634
+ V K+ K T+ +V GK G+ V + PAP+GTG+++
Sbjct: 138 MYKV-------KMNKNFTLYHEVIGKHGAGKVLIKPAPKGTGVIA 175
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 66.5 bits (155), Expect = 5e-10
Identities = 36/103 (34%), Positives = 58/103 (56%)
Frame = +2
Query: 326 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 505
+++LKI V K T+ G+ F A+GD G IGLG+ + V AIR AI AK +++
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIV 70
Query: 506 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 634
+ K +T+P ++ GK G+ T+ + PA GTG+++
Sbjct: 71 KISL--------KNNTIPHEIAGKWGATTLWMAPAYEGTGVIA 105
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 66.1 bits (154), Expect = 7e-10
Identities = 38/105 (36%), Positives = 60/105 (57%)
Frame = +2
Query: 320 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 499
L + V+ + V K + G+R RF A V +GD NGH+G G ++EV AI+ A+ AK +
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAVDDAKKN 71
Query: 500 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 634
++ V +G T+P ++ G+ GS V + PA GTG++S
Sbjct: 72 LISV------PIVGT--TIPHEIHGQFGSGNVLMKPAAEGTGVIS 108
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 60.9 bits (141), Expect = 3e-08
Identities = 39/107 (36%), Positives = 55/107 (51%)
Frame = +2
Query: 314 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 493
P L ++V+KI + K + G R RF A V +GD G IG +KE+ AI+ A+ AK
Sbjct: 13 PLLEEKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGFATAKAKEIVEAIKKALEKAK 72
Query: 494 LSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 634
+ VR G T+P G+ G+ L PA +GTGIV+
Sbjct: 73 KQL--VRIPITGT------TIPHDTIGRFGASKFFLKPASKGTGIVA 111
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 60.9 bits (141), Expect = 3e-08
Identities = 36/109 (33%), Positives = 60/109 (55%), Gaps = 2/109 (1%)
Frame = +2
Query: 326 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 505
+++L + K + G+R RF A V +GD NG +G+G+ +KEV AI A +A+ +++
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVAIEKAKAVARKNMI 78
Query: 506 --PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVP 646
PV G T+P ++ G+ + V L PA GTG+++ VP
Sbjct: 79 TVPVENG----------TIPHEIVGENSTSRVLLKPAGPGTGVIAGTVP 117
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 60.5 bits (140), Expect = 3e-08
Identities = 37/104 (35%), Positives = 56/104 (53%)
Frame = +2
Query: 323 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 502
+++V+KI V K + G+R F A +GD G +G+G + EV AIR +I AK +
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVPDAIRKSIESAKKHL 90
Query: 503 LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 634
+ + K HT+P +V GK S V L P+ GTGI++
Sbjct: 91 VKIN--------FKGHTIPHEVIGKFKSARVILKPSTAGTGIIA 126
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 59.7 bits (138), Expect = 6e-08
Identities = 33/112 (29%), Positives = 61/112 (54%)
Frame = +2
Query: 299 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 478
DF G + + ++++ V K + G+ F+ IG+ NG +G+G + +EVATA++ A
Sbjct: 506 DFDDGENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVATAVKRA 565
Query: 479 IILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 634
++ AK SV+ V + T+P +V K + ++PA GTG+++
Sbjct: 566 LVDAKKSVVRV-------PLVGAGTIPHRVEAKFNAARCVMVPAADGTGVLA 610
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 58.4 bits (135), Expect = 1e-07
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +2
Query: 176 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 283
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIK
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIK 89
>UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n=1;
Mus musculus|Rep: UPI000056598D UniRef100 entry - Mus
musculus
Length = 239
Score = 58.4 bits (135), Expect = 1e-07
Identities = 53/154 (34%), Positives = 71/154 (46%), Gaps = 3/154 (1%)
Frame = +2
Query: 194 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAG 373
W+ +T L L + KI E + LF P K I F G SL D+++ + + +
Sbjct: 34 WLQITTLYGLFKNMKIKSQEEVCLFCCPSKSLFTITDFPGESLKDDLMMASGLGSRLLSS 93
Query: 374 QRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL-SVLPVRRGYWGNKIGK-- 544
QRT+ GH GL CS EVATAI+ I + L S P+ R GN GK
Sbjct: 94 QRTK-----------GHSGLSSMCSGEVATAIQVLGITSYLGSPWPLCRE--GNMTGKSL 140
Query: 545 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVP 646
P P ++ S+ LI AP T I+S VP
Sbjct: 141 PSVCPMQIRDYHSSMLACLITAP-STCIISGLVP 173
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 58.4 bits (135), Expect = 1e-07
Identities = 31/103 (30%), Positives = 58/103 (56%)
Frame = +2
Query: 326 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 505
+ V+++ V K + G++ +F+A V +GD G++G+G +KEV A++ + I A+ +++
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIV 208
Query: 506 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 634
V + K T P + G G+ V L PA GTG+++
Sbjct: 209 QV-------PMTKYSTFPHRSEGDYGAAKVMLRPASPGTGVIA 244
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 58.0 bits (134), Expect = 2e-07
Identities = 37/110 (33%), Positives = 57/110 (51%)
Frame = +2
Query: 305 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAII 484
F ++V+ I V K T+ G+ RF A V +GD G +GLG + EV AI+ A+
Sbjct: 38 FQKDDFEEKVVTIRRVTKVTKGGRHFRFAAVVVVGDKKGQVGLGTGKANEVPEAIKKAVK 97
Query: 485 LAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 634
AK +++ V + TVP +V G G+ V + PA GTG+++
Sbjct: 98 EAKKNLIRVPL--------RGTTVPHEVIGHFGAGQVLIKPAKPGTGVIA 139
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 58.0 bits (134), Expect = 2e-07
Identities = 29/103 (28%), Positives = 59/103 (57%)
Frame = +2
Query: 326 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 505
+ V++I V K + G++ F+A + +GD NG +G+GV + +V A++ + A+ +++
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDVIGAVKKGVSDARKALI 127
Query: 506 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 634
V + K +++P ++G G+ V L PA GTG+++
Sbjct: 128 RV-------PLNKINSIPHPMSGSSGAANVFLKPASGGTGVIA 163
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 57.6 bits (133), Expect = 2e-07
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Frame = +2
Query: 326 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV- 502
+++++I K T+ G+ F+ +G+ NG +GLG+ ++EV AIR AI AK ++
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKAREVPEAIRKAISAAKRNIV 76
Query: 503 -LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 634
+PV G T+P +V G+ + V L PA GTGI++
Sbjct: 77 EVPVING----------TIPHEVIGRQDASKVLLKPAAPGTGIIA 111
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 56.8 bits (131), Expect = 4e-07
Identities = 31/103 (30%), Positives = 56/103 (54%)
Frame = +2
Query: 326 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 505
+ V+++ V K + G++ F+A V +GD G +G+GV +KEV A++ + A+ +++
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSATNARRNII 245
Query: 506 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 634
V + K T P + G G+ V L PA GTG+++
Sbjct: 246 TV-------PMTKYLTFPHRADGDYGAAKVMLRPASPGTGVIA 281
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 56.4 bits (130), Expect = 6e-07
Identities = 22/38 (57%), Positives = 30/38 (78%)
Frame = +2
Query: 194 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFF 307
W PVTKLGRLV++GK+ ++ I+ F + IKEFEI+D F
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQIFEFGIKIKEFEIVDHF 72
>UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
pneumoniae
Length = 219
Score = 56.4 bits (130), Expect = 6e-07
Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Frame = +2
Query: 326 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA--KLS 499
+ ++K+ + K T+ G+ RF V +G+ G IG G+ + EV AI+ AI A L
Sbjct: 68 ERIVKLKRISKTTKGGRNMRFSVLVVVGNRKGKIGYGIAKALEVPNAIKKAIKAAHNSLH 127
Query: 500 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 634
+ + +G ++ +V G+ G+ V L PAP+GTGI++
Sbjct: 128 TIEIHKG----------SIYHEVIGRSGASRVLLKPAPQGTGIIA 162
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 56.4 bits (130), Expect = 6e-07
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
Frame = +2
Query: 320 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 499
L + ++ + T+ G+R F V +GD GH+G G +KEV AI I AK +
Sbjct: 28 LEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKN 87
Query: 500 VL--PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 634
V+ P+ G TVP V G G+ + ++PA RGTG+V+
Sbjct: 88 VIRVPIVDG----------TVPHDVIGTFGATKIIVLPARRGTGVVA 124
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 54.4 bits (125), Expect = 2e-06
Identities = 30/103 (29%), Positives = 57/103 (55%)
Frame = +2
Query: 326 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 505
+ ++KI V K T+ G++ F+A V IGD NG +G+GV +++V A + A + +++
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKAKTDGRKNLI 87
Query: 506 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 634
V I K ++P V G G+ + + P+ G+G+++
Sbjct: 88 DV-------PITKSLSIPHAVIGDLGACKIIMRPSIEGSGVIA 123
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 51.6 bits (118), Expect = 2e-05
Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Frame = +2
Query: 311 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 490
G L ++++ I V K + G+R F A V +GD G +G G ++EV AI A A
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAISKATAAA 115
Query: 491 KLSVL--PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 634
K +++ P+R G + G+ G+ G+ V L AP GTGI++
Sbjct: 116 KKTMIRVPLREGRTLHHDGR---------GRFGAGLVYLRSAPSGTGIIA 156
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 51.2 bits (117), Expect = 2e-05
Identities = 37/108 (34%), Positives = 51/108 (47%)
Frame = +2
Query: 311 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 490
G L D V+ I V K + G+ F A V +GD NG +G+G S+EV AI + A
Sbjct: 42 GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVPAAIAKGQLDA 101
Query: 491 KLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 634
K + V R T+ V G + TV L PA GTG+++
Sbjct: 102 KKHMFSVPR--------VRGTITHPVQGHDAAGTVLLRPAAPGTGVIA 141
>UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YGL123C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 76
Score = 50.8 bits (116), Expect = 3e-05
Identities = 30/54 (55%), Positives = 35/54 (64%)
Frame = -3
Query: 342 IFRTSSFRDGPRKKSMISNSLIGKENK*MLSSLSIFPSRTRRPSLVTGTHSFWS 181
+F TSS + G K SMI NSL GKE K + S + I P+ T PSLVTGTH F S
Sbjct: 1 MFMTSSCKPG-NKVSMIWNSLTGKECKKISSMVVILPALTNLPSLVTGTHPFSS 53
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 50.0 bits (114), Expect = 5e-05
Identities = 36/103 (34%), Positives = 51/103 (49%)
Frame = +2
Query: 326 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 505
+ V+ I V K + G+R F A V +GD NG +G+G +KEV AI + A+ S
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVPAAIAKGVEEARKSFF 103
Query: 506 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 634
V IG T P V G+ + V L PA GTG+++
Sbjct: 104 RV------PLIGGTITHP--VQGEAAAGVVLLRPASPGTGVIA 138
>UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3;
Bacteria|Rep: 30S ribosomal protein S5 - Rhodopirellula
baltica
Length = 177
Score = 49.2 bits (112), Expect = 9e-05
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 2/111 (1%)
Frame = +2
Query: 308 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 487
L L D V+KI + G+R F A V +G+ +G +G G + EV +++ A
Sbjct: 17 LEAGLLDRVVKIKRCAAVVKGGRRFSFAAMVVVGNGSGQVGWGYGKANEVPPSVQKAQKQ 76
Query: 488 AKLSVL--PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 634
A S++ P+ G ++P +V G+ G+ V LIPA GTGI++
Sbjct: 77 ASRSMIHVPLVEG----------SIPHQVWGRYGAARVVLIPAGAGTGIIA 117
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 49.2 bits (112), Expect = 9e-05
Identities = 33/105 (31%), Positives = 53/105 (50%)
Frame = +2
Query: 320 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 499
L ++++ I V K + G+R F A V +GD NG +G G+ + +V AIR + A+
Sbjct: 16 LIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGLGKANQVPEAIRKGVERARKD 75
Query: 500 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 634
+ V + PH +V G G+ V L PA GTG+++
Sbjct: 76 MALVSL----TDVSIPH----QVIGHYGAGRVFLRPASAGTGLIA 112
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 48.8 bits (111), Expect = 1e-04
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
Frame = +2
Query: 326 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 499
D+++ I V K + G+R F A V +GD G +G G ++EV AIR A AK L
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATEAAKRDLI 83
Query: 500 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 634
+P+R G T+ V G+ G+ V L A GTGI++
Sbjct: 84 FVPLRGG---------RTLHHDVHGRHGAGKVLLRSAKPGTGIIA 119
>UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 208
Score = 48.0 bits (109), Expect = 2e-04
Identities = 26/52 (50%), Positives = 33/52 (63%)
Frame = -3
Query: 648 LGTGADTIPVPRGAGISRTVTEPHLPVTLQGTVCGFPILLPQ*PLRTGKTDN 493
LGT A+ +PVP GAG+ T TEP P+TL G +CG LLP P+ + DN
Sbjct: 37 LGTEAEVMPVPMGAGMKSTRTEPQWPITLCG-LCGACCLLP--PVASTHRDN 85
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 48.0 bits (109), Expect = 2e-04
Identities = 27/103 (26%), Positives = 52/103 (50%)
Frame = +2
Query: 326 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 505
+ V++I V K + G++ F+A V +G+ G +G+GV + +V A+R + K ++
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGAVRKGVADGKKQLI 78
Query: 506 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 634
V + K +++ G G V + PA GTG+++
Sbjct: 79 EV-------PLTKSNSITHITNGVSGGAKVVVRPAAPGTGVIA 114
>UniRef50_Q7MTN0 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 172
Score = 47.6 bits (108), Expect = 3e-04
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Frame = +2
Query: 320 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 499
L D ++ I V K T+ G+ F A V +G+ +G IG G+ + EV AI + AK +
Sbjct: 16 LKDRLVAINRVTKVTKGGRTFTFAAIVVVGNEDGVIGWGLGKAGEVPAAIAKGVEAAKKN 75
Query: 500 VL--PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 628
++ PV G T+P + G +V L PA GTG+
Sbjct: 76 LIRVPVHNG----------TIPHEQAASYGGASVFLKPATTGTGV 110
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 46.8 bits (106), Expect = 5e-04
Identities = 32/104 (30%), Positives = 53/104 (50%)
Frame = +2
Query: 326 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 505
++++ I V + G+R F A V +GD G +G G + EV AI+ A+ A+ +++
Sbjct: 91 EKIVNIARVTNVVKGGRRFSFAAVVVVGDKKGRVGYGHGKALEVPDAIKKAVKDAQNNLI 150
Query: 506 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSA 637
V I TVP + K + V L PAP+G GI+++
Sbjct: 151 RV-------PIINKSTVPHEQWAKFLASKVMLKPAPKGKGIIAS 187
>UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 148
Score = 46.0 bits (104), Expect = 8e-04
Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Frame = +2
Query: 332 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 511
V+ + K T+ G T F A V +G+ +G IG +V AI A A S+ V
Sbjct: 4 VIDVNRTTKVTKGGDLTNFTAMVVVGNGDGVIGFATGKGADVGMAIDKAYRKAARSLTYV 63
Query: 512 RRGYWGNKIGKPHTVPCKVTGK-CGSVTVRLIPAPRGTGIVS 634
+R + HT+ +V GK C ++ V ++PAP G GIV+
Sbjct: 64 QRF-------EDHTIYHEVRGKYCKTICV-MLPAPSGDGIVA 97
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 46.0 bits (104), Expect = 8e-04
Identities = 31/105 (29%), Positives = 54/105 (51%)
Frame = +2
Query: 320 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 499
L ++++ + V K + G+ F A +GD G +G+G S+EV A++ A+ A+
Sbjct: 21 LKEKMVSVNRVTKVVKGGRILGFAALTVVGDGKGSVGMGKGKSREVPLAVQKAMDEARQR 80
Query: 500 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 634
++ V N I T+ V G+ G+ V + PA GTGI++
Sbjct: 81 MVRV------NLIN--GTLHHSVIGRHGAARVYMQPASEGTGIIA 117
>UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4;
Rickettsiales|Rep: 30S ribosomal protein S5 -
Pelagibacter ubique
Length = 170
Score = 45.6 bits (103), Expect = 0.001
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 2/105 (1%)
Frame = +2
Query: 326 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 499
++++ I + K + G+R F A V +G+ G IG+ +K+V AI+ A A+ L
Sbjct: 13 EKLVHINRITKVVKGGRRFGFSALVVVGNQAGKIGVAHAKAKQVPDAIKKANETARRVLI 72
Query: 500 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 634
+P+R G T+ V GK G+ + L AP+GTGI++
Sbjct: 73 HVPLREG---------RTIHHDVYGKDGAGKIILRSAPKGTGIIA 108
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 45.2 bits (102), Expect = 0.001
Identities = 32/105 (30%), Positives = 50/105 (47%)
Frame = +2
Query: 320 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 499
L ++V+ I K + G+R F A +GD NG +G+G + EV AI+ A+
Sbjct: 71 LVEKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIGYGKANEVPDAIKKGTENARKR 130
Query: 500 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 634
++ V K T+P +V G V L PA GTG+++
Sbjct: 131 MVSVTL--------KGDTIPHEVFGTHDGGKVLLRPAVTGTGLIA 167
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 45.2 bits (102), Expect = 0.001
Identities = 31/104 (29%), Positives = 49/104 (47%)
Frame = +2
Query: 323 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 502
++ V+ I K + G+ F A V +GD G +G G + EV+ AIR A+ ++
Sbjct: 16 DESVISINRSAKVVKGGKNFSFGALVVVGDRKGRVGYGYGKANEVSDAIRKGGEAARRNL 75
Query: 503 LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 634
+ V T+P +V K G V L PA GTG+++
Sbjct: 76 VTVPM--------HGQTLPHEVEVKFGGARVLLRPASAGTGLIA 111
>UniRef50_A0CLK5 Cluster: Chromosome undetermined scaffold_20, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_20,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 337
Score = 45.2 bits (102), Expect = 0.001
Identities = 25/85 (29%), Positives = 40/85 (47%)
Frame = +2
Query: 386 FKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCK 565
F+ + IG+ NG IG G K+ TA+R A + A+ +++P+ W HT P
Sbjct: 187 FRQLIFIGNGNGVIGYGKGKGKDFETALRRAKVDAQRNLVPISLDLW-------HTCPIP 239
Query: 566 VTGKCGSVTVRLIPAPRGTGIVSAP 640
+TG+ + + P P G P
Sbjct: 240 LTGRFNDAEIEINPRPLGFNAYGNP 264
>UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00649.1 - Gibberella zeae PH-1
Length = 504
Score = 43.6 bits (98), Expect = 0.004
Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Frame = +2
Query: 350 VQKQTRAGQRTRFKAFVAI-GDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYW 526
V QTR G + R + VAI G+ NG +GLG+ S E A A +LA ++ PVRR +
Sbjct: 350 VSNQTRLG-KVRSTSVVAIAGNGNGRLGLGMAKSTEPGVAEETAQMLAIRNMKPVRR--Y 406
Query: 527 GNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 628
N+ T+ VT K V L+ P G G+
Sbjct: 407 ENR-----TIYGNVTSKISGTVVELMARPPGFGL 435
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 43.2 bits (97), Expect = 0.006
Identities = 31/105 (29%), Positives = 50/105 (47%)
Frame = +2
Query: 320 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 499
L ++VL + K + G++ F A + +GD G +G G + E+ AIR A+ +
Sbjct: 13 LEEKVLVVNRCSKVVKGGRKFSFSALILVGDGKGRLGYGFAKANELTDAIRKGGEAARKN 72
Query: 500 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 634
++ + G+ I PH V G + L PA GTGIV+
Sbjct: 73 LITI-ESLEGDSI--PHEVLVDQDG----AQLLLKPAKPGTGIVA 110
>UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondrial
ribosome structure: Pubmed 11279123. precursor; n=9;
Eurotiomycetidae|Rep: Remark: literature about the
mitochondrial ribosome structure: Pubmed 11279123.
precursor - Aspergillus niger
Length = 444
Score = 42.3 bits (95), Expect = 0.010
Identities = 33/104 (31%), Positives = 50/104 (48%)
Frame = +2
Query: 317 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 496
SL + L I V QTR G+ G+ NG +G+G+ S E+ A + A A
Sbjct: 254 SLYIKDLVIRRVSNQTRLGKVPSMSVVTVAGNQNGLMGIGIAKSDEIIDACQQARARAVK 313
Query: 497 SVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 628
++ PV R Y + T+ V GK G+V ++L+ P G G+
Sbjct: 314 NMQPVPR-Y------EKRTIFGDVEGKVGAVQLKLMHRPPGFGL 350
>UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: 30S ribosomal
protein S5 - Neorickettsia sennetsu (strain Miyayama)
Length = 172
Score = 42.3 bits (95), Expect = 0.010
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Frame = +2
Query: 320 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 499
L + V+ I V K T+ G++ F+ +GD G +G EV A A+ AK +
Sbjct: 11 LFESVVDIARVSKVTKGGRQFSFRVAALVGDKKGCVGYATAKHDEVLDARSKAVRKAKGA 70
Query: 500 VL--PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 634
++ P+R G T+ K G+ + + PAP GTGIV+
Sbjct: 71 MIRFPLREG---------RTIHHDCFSKLGASKLFIKPAPEGTGIVA 108
>UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1;
Neurospora crassa|Rep: Related to ribosomal protein S5 -
Neurospora crassa
Length = 477
Score = 41.1 bits (92), Expect = 0.023
Identities = 30/93 (32%), Positives = 46/93 (49%)
Frame = +2
Query: 350 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWG 529
V QTR G+ V G+ +G +GLG+ S E + A+ A +LA ++ P+ R +
Sbjct: 323 VVNQTRLGKIASDSVMVIAGNGDGWLGLGMAKSVEASIAVEKATLLAIQNMQPIPR--YE 380
Query: 530 NKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 628
N+ T+ +VT K VRL P G G+
Sbjct: 381 NR-----TIYGEVTTKVSGTIVRLNSRPPGFGL 408
>UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 414
Score = 39.9 bits (89), Expect = 0.052
Identities = 30/103 (29%), Positives = 48/103 (46%)
Frame = +2
Query: 320 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 499
L ++L V QTR G+ + +G+ NG IGLG S + A+ A ++A +
Sbjct: 250 LRHKILVQRFVTNQTRLGKVQSWHIMTIVGNGNGRIGLGEAKSVDGQIAMHKARLMAIKN 309
Query: 500 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 628
++P+RR Y + T+ KV K V + P G G+
Sbjct: 310 MVPIRR-Y------EDRTIYGKVKVKIAGTVVEMAARPPGFGL 345
>UniRef50_Q7R438 Cluster: GLP_254_52826_53383; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_254_52826_53383 - Giardia lamblia
ATCC 50803
Length = 185
Score = 39.1 bits (87), Expect = 0.091
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = -2
Query: 421 TVVVANGNKCLETCALSGTCLFLYRHDL*NLIIQ-GRAEEEINDLEFFDW*RKQVNALEF 245
+V V + + E L G L L RHD+ +L+ + +E +NDL D R N ++
Sbjct: 44 SVTVPDYHMSTEPRTLPGCGLLLDRHDIAHLLRKLALRKEVVNDLCLLDGERILENVIKG 103
Query: 244 VDFSFANKTAEFGDRNPLFLVFL 176
+ S ++ AEF R PLFL+ L
Sbjct: 104 LYLSCLHQAAEFRGRMPLFLLHL 126
>UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 407
Score = 39.1 bits (87), Expect = 0.091
Identities = 30/104 (28%), Positives = 49/104 (47%)
Frame = +2
Query: 317 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 496
+L+ + L V QTR G+ + +G+ NG +G+G S E + A A +LA
Sbjct: 242 NLHSKQLVQRRVANQTRLGKVQKASIMYVVGNGNGWLGIGEAKSTEPSIAGLKARLLAIR 301
Query: 497 SVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 628
++ P+RR Y + T+ VT K V++ P G G+
Sbjct: 302 NMRPIRR-Y------EDRTIYGSVTAKVSGTVVKMNARPPGFGL 338
>UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis
group|Rep: 30S ribosomal protein S5 - Ehrlichia
ruminantium (strain Gardel)
Length = 174
Score = 39.1 bits (87), Expect = 0.091
Identities = 28/101 (27%), Positives = 47/101 (46%)
Frame = +2
Query: 332 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 511
++ + V K + G+R F V IGD G +G G+ EV+ A A+ A+ +++ V
Sbjct: 20 IVSVRRVAKVVKGGRRFSFSVLVVIGDEKGKVGCGIGKHLEVSEAKVKAVNAARKNMIRV 79
Query: 512 RRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS 634
+ + T+ + K S V L A GTGI++
Sbjct: 80 H-------LRESRTLHHDIQAKFCSSKVMLRSAKVGTGIIA 113
>UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Putative
uncharacterized protein - Listeria monocytogenes str. 4b
H7858
Length = 77
Score = 37.1 bits (82), Expect = 0.37
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -2
Query: 481 NSASNGSGDFLAALHTQTNMTVVVANGNKCLET 383
NS ++ +FL T+TNMT+ V+N NKC ET
Sbjct: 25 NSFTDSIWNFLRFTSTETNMTIFVSNNNKCCET 57
>UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2
protein - Homo sapiens (Human)
Length = 97
Score = 35.5 bits (78), Expect = 1.1
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 605 PAPRGTGIVSAPVPXK 652
PAPRGTGIVSAPVP K
Sbjct: 1 PAPRGTGIVSAPVPKK 16
>UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium
falciparum|Rep: Rps5 protein - Plasmodium falciparum
Length = 239
Score = 34.7 bits (76), Expect = 2.0
Identities = 21/66 (31%), Positives = 37/66 (56%)
Frame = +2
Query: 308 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 487
L ++ +++++I + + G+ R+K + +G+ G IGLGV SK + I AII
Sbjct: 94 LNNNIIEKIIEIKKISYTIKKGRIRRYKIVLVLGNKQGWIGLGV--SKNI--NINKAIIS 149
Query: 488 AKLSVL 505
AK+ L
Sbjct: 150 AKIKAL 155
>UniRef50_A6S1U3 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 411
Score = 34.7 bits (76), Expect = 2.0
Identities = 29/103 (28%), Positives = 45/103 (43%)
Frame = +2
Query: 320 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 499
L+ ++L V QTR G+ G+ G +G+G +E A I A +
Sbjct: 248 LDTKILVSHRVVNQTRLGKIDSMYVLAIAGNGRGRLGIGEAKGQEPEDTNNNAKIAAIKN 307
Query: 500 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGI 628
+ PV R Y + T+ V GK +V V+L+ P G G+
Sbjct: 308 MQPVPR-Y------EERTIYGDVEGKVSAVEVKLMARPPGFGL 343
>UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein S5, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 307
Score = 34.7 bits (76), Expect = 2.0
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 305 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAI 469
++ L + L + V QT G+ F A V +GD NG +GLG K +E++ AI
Sbjct: 139 YITRKLTMKPLVMKRVSNQTGKGKIASFYALVVVGDKNGMVGLGEGKSREEMSKAI 194
>UniRef50_UPI0000F2DE4B Cluster: PREDICTED: similar to thioredoxin
domain containing 3 (spermatozoa),; n=1; Monodelphis
domestica|Rep: PREDICTED: similar to thioredoxin domain
containing 3 (spermatozoa), - Monodelphis domestica
Length = 559
Score = 33.5 bits (73), Expect = 4.5
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +2
Query: 242 DKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQ--RTRFKAFVAIGDN 415
DK E ++LFSL K ++ P LN +VL+++ +++ AG+ R + + I
Sbjct: 81 DKCEPVFLFSLNGKIVSMVKGANAPLLNSKVLQLIEDERKVLAGEIPRRSDEYNILIIKP 140
Query: 416 NGHIGLGVKCSKEVATAIRGAIILAKLSVL 505
NG V K++ T GA I+A++ +L
Sbjct: 141 NGVEEEKVDTIKQLITGF-GAEIVAEMQLL 169
>UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n=5;
Bacteria|Rep: Ribosomal protein S2-related protein -
Deinococcus radiodurans
Length = 472
Score = 33.1 bits (72), Expect = 6.0
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +2
Query: 389 KAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIG 541
++ V IG + H G + +++VA A+RG + L V GYW + G
Sbjct: 2 RSLVLIGHGSHHHGESARATQQVAEALRGRGLAGHLPYDEVLEGYWQQEPG 52
>UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 270
Score = 33.1 bits (72), Expect = 6.0
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 332 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 478
V+++ V T G++ +A V +G+ NG G GV + +AIR A
Sbjct: 156 VVELRRVSNVTSGGKKRSLRALVVVGNRNGAAGFGVGKGRTPISAIRKA 204
>UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila
pseudoobscura|Rep: GA16916-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 391
Score = 32.7 bits (71), Expect = 7.9
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Frame = -1
Query: 203 QEPTLSGLPCRAHDHGRDHDRVHE-DRRGLYLHRV-----IRIRRENRHVHRLEQRPPL 45
+EPT S CR+ GR H R G HR+ IR R HRL + PP+
Sbjct: 146 REPTRSPSRCRSRQSGRSHQHPQRRSRSGTRQHRLSREPPIRHSRSISRQHRLSREPPV 204
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 653,493,452
Number of Sequences: 1657284
Number of extensions: 13442399
Number of successful extensions: 40551
Number of sequences better than 10.0: 92
Number of HSP's better than 10.0 without gapping: 38208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40344
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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