Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_G21
         (630 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0458 + 18406844-18408877                                         30   1.3  
03_06_0713 - 35687672-35689219                                         29   4.0  
02_05_0633 - 30492742-30492987,30493082-30494194                       29   4.0  
05_04_0410 + 21053952-21054014,21054127-21054160,21054267-21054448     28   5.3  
01_06_1801 - 39954425-39954533,39955289-39955578,39955786-399568...    28   5.3  
01_06_1073 - 34300089-34300235,34300783-34301031,34302509-343027...    27   9.3  
01_02_0068 - 10803815-10804391,10804487-10804722,10804808-108049...    27   9.3  

>07_03_0458 + 18406844-18408877
          Length = 677

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 13/52 (25%), Positives = 26/52 (50%)
 Frame = -1

Query: 612 TIHARSLWQHLAFVHLKRQSRFNICSAARHQRCCSDVVRPRSPLHRHNGIDL 457
           ++ A  +W+ +    + +QSR   C+ A+   CC D V     ++++  I L
Sbjct: 407 SVEADEIWKEMFLYEMIKQSRIEHCNVAKLFGCCLDHVDAPVLVYKYGDIGL 458


>03_06_0713 - 35687672-35689219
          Length = 515

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
 Frame = -1

Query: 540 CSAARHQRCCSDVVR--PRSPLHRHNGIDLTAASAPPGTARRTTLSPCH*HLNTHTR 376
           C+  R +R  +   R  P S  H H+G  LT  +APP  A + TL      L +H R
Sbjct: 12  CAIQRRRRSTAPARRRGPPSRRHPHSGAALTLRAAPP-PATQPTLDRVLSDLGSHPR 67


>02_05_0633 - 30492742-30492987,30493082-30494194
          Length = 452

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
 Frame = -1

Query: 567 LKRQSRFNICSAARHQRC--CSDVVRPRSPL-HRHNGIDLTAASAPPGTARRTTLSPCH* 397
           L+R++R+  C+A     C  C   V   +PL  RH  + L  +S PP TAR +       
Sbjct: 24  LRRRARW-YCAADDAFLCQGCDTSVHSANPLARRHERLRLRVSSPPPLTARASVEEEAAA 82

Query: 396 HLNTHTRARASTSRDVVCTLARTQTRT 316
            + T T   +     V    ++ + RT
Sbjct: 83  AVGTTTTTTSKREGGVTPAWSKRKART 109


>05_04_0410 + 21053952-21054014,21054127-21054160,21054267-21054448
          Length = 92

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 13/44 (29%), Positives = 19/44 (43%)
 Frame = -1

Query: 513 CSDVVRPRSPLHRHNGIDLTAASAPPGTARRTTLSPCH*HLNTH 382
           CS   RP+  L             PPGT+    + PC+ ++ TH
Sbjct: 42  CSKSGRPKMCLRACGTCCQRCGCVPPGTSGNENVCPCYANMTTH 85


>01_06_1801 - 39954425-39954533,39955289-39955578,39955786-39956838,
            39956998-39957263,39957345-39957420,39957525-39957605,
            39957676-39957831,39958565-39958669,39958761-39959367,
            39959514-39959585,39959802-39959953,39960063-39960240,
            39960642-39960745,39960822-39960953,39961036-39961132,
            39961280-39961407,39961533-39961592,39962799-39962918,
            39963011-39963091,39963173-39963361,39963826-39964024,
            39964177-39964257,39964398-39964588,39965226-39965382,
            39965986-39966119,39966266-39966334,39966434-39966481,
            39966572-39966646,39967112-39967192,39967399-39967461,
            39967564-39967623,39967754-39967795,39968777-39968902,
            39969027-39969176
          Length = 1843

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -1

Query: 336  ARTQTRTPQKLALHFVVSIRRHVSLSHNRK*AKSNNK 226
            A ++TR PQK   H    + +H  +  + K  KS N+
Sbjct: 1357 AESETRVPQKRVAHNAGKVSKHDMVKEDTKSGKSTNR 1393


>01_06_1073 -
           34300089-34300235,34300783-34301031,34302509-34302780,
           34303131-34303182,34303272-34303349,34303659-34303718,
           34303801-34303875,34304382-34304585,34304694-34304767,
           34304992-34305095,34305261-34305334,34305407-34305473,
           34306024-34306127
          Length = 519

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 557 CRFKWTNARCCQRERAWIV 613
           C  KWT A  CQ E+ W++
Sbjct: 46  CGGKWTFAELCQSEQIWVL 64


>01_02_0068 -
           10803815-10804391,10804487-10804722,10804808-10804978,
           10805709-10805867
          Length = 380

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +1

Query: 451 CRQVNAVVPMER*SRPDYVATAALVTRCGTYIK 549
           CR+    V M R  RP Y A    +T CG YI+
Sbjct: 204 CRK-GVAVEMSRDHRPTYDAEHERITECGGYIE 235


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,226,257
Number of Sequences: 37544
Number of extensions: 343046
Number of successful extensions: 900
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 900
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1537558360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)