Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_G19
         (627 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   2.1  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    23   2.8  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    22   4.8  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   4.8  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    22   4.8  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   4.8  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           22   4.8  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   6.4  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 142 YVMCCDSLESIFMLTLQKLFTKSYK 216
           YV CCD+  ++F+  +     K YK
Sbjct: 159 YVYCCDNNFNVFLRQVFTCRCKDYK 183


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 123 LHNII*ICNVLRLFR 167
           LH I  +CNVL +F+
Sbjct: 119 LHTIFLVCNVLTVFK 133


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = -3

Query: 409 PKNDLPWMLCHKDAKRKKN 353
           P N  PWM  H D+    N
Sbjct: 165 PANFYPWMKAHGDSSATGN 183


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = +2

Query: 449 RFHIEKNPMNLWVPPDSDFYHDTNWYIKTFGTG 547
           + H++ +P++  V P     + T+W  K  G G
Sbjct: 507 KLHLKNSPISKKVRPPQVLCYITSWSQKRPGAG 539


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = -3

Query: 409 PKNDLPWMLCHKDAKRKKN 353
           P N  PWM  H D+    N
Sbjct: 165 PANFYPWMKAHGDSSATGN 183


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/31 (29%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = +1

Query: 103 VIIYLFFY-ITLFRYVMCCDSLESIFMLTLQ 192
           +++Y+FF+ ++  RYVM    L+++ +  L+
Sbjct: 272 IVMYVFFFHLSDVRYVMVVYLLKNVVLYGLE 302


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = -3

Query: 409 PKNDLPWMLCHKDAKRKKN 353
           P N  PWM  H D+    N
Sbjct: 165 PANFYPWMKAHGDSSATGN 183


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +2

Query: 509 HDTNWYIKTFGTGLRLQNIIFTANDILHPD 598
           H T +   T+   LR  +I  T + I HP+
Sbjct: 264 HGTQFISNTWQNSLRAADIQPTLSSIRHPE 293


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,563
Number of Sequences: 336
Number of extensions: 4140
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)