Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_G17
         (653 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton anti...    23   6.4  
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    23   8.4  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    23   8.4  

>EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton
           antiporter protein.
          Length = 647

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = +2

Query: 380 LTAETFGFKINANGTSLKKKQIWTLEPASG 469
           LTA      I+  GT L KK    LEP  G
Sbjct: 565 LTAPLGAILISVTGTKLLKKTKQQLEPLDG 594


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -2

Query: 292 RHCCVRSL*SFHTRAGLHRRRNAIARSRE 206
           R+CC R    F+ R  L +    +A+S E
Sbjct: 99  RNCCTRQRKDFNPRKHLLKNVTGVAKSGE 127


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -2

Query: 292 RHCCVRSL*SFHTRAGLHRRRNAIARSRE 206
           R+CC R    F+ R  L +    +A+S E
Sbjct: 99  RNCCTRQRKDFNPRKHLLKNVTGVAKSGE 127


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 627,170
Number of Sequences: 2352
Number of extensions: 11485
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)