Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_G13
(548 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17; Eukaryo... 270 1e-71
UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86; Eukaryo... 227 1e-58
UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55; Eukaryo... 207 1e-52
UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40; Eukar... 184 2e-45
UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1; Dictyost... 178 6e-44
UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6; Eukary... 178 8e-44
UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonch... 167 1e-40
UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lambl... 161 7e-39
UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2; E... 151 1e-35
UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, wh... 144 9e-34
UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillard... 138 6e-32
UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1; ... 136 3e-31
UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3; Archaea... 128 1e-28
UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14; Euryar... 125 6e-28
UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S riboso... 122 7e-27
UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2; Thermoprotei... 115 8e-25
UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1; Encephal... 114 1e-24
UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2; Methano... 105 5e-22
UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8; Thermop... 103 2e-21
UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2; Tr... 103 4e-21
UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4; Methano... 101 1e-20
UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S riboso... 99 6e-20
UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1; Nanoarc... 98 1e-19
UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella... 98 1e-19
UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5; Thermop... 93 3e-18
UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4; Euryarc... 93 3e-18
UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus N... 90 4e-17
UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1; Cenarch... 90 4e-17
UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2; environ... 89 5e-17
UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A, S... 88 1e-16
UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5; Halobac... 88 1e-16
UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellula... 83 4e-15
UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1; Thermop... 78 2e-13
UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3; Thermop... 72 1e-11
UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal ... 60 3e-08
UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S riboso... 59 6e-08
UniRef50_Q6E6D2 Cluster: Large subunit ribosomal protein L9e; n=... 57 2e-07
UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6; Proteoba... 54 3e-06
UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108; Proteo... 54 3e-06
UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3; Thermoto... 53 4e-06
UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1; ... 52 1e-05
UniRef50_Q661C7 Cluster: 50S ribosomal protein L6; n=9; cellular... 51 2e-05
UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7; Bacilli|... 51 2e-05
UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40; Bacteri... 51 2e-05
UniRef50_Q8R7W9 Cluster: 50S ribosomal protein L6; n=22; Bacteri... 50 5e-05
UniRef50_Q847P4 Cluster: 50S ribosomal protein L6; n=1; Aster ye... 48 1e-04
UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132, w... 46 4e-04
UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular... 46 4e-04
UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 45 0.001
UniRef50_Q2JIL3 Cluster: 50S ribosomal protein L6; n=44; cellula... 43 0.004
UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16; Firmicu... 43 0.004
UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34; Bacteri... 43 0.004
UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6; Bacteria... 42 0.009
UniRef50_A5LSZ6 Cluster: 50S ribosomal protein L6; n=1; Streptoc... 42 0.012
UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 41 0.016
UniRef50_Q6KI40 Cluster: 50S ribosomal protein l6; n=4; Mycoplas... 40 0.029
UniRef50_Q9ZCS0 Cluster: 50S ribosomal protein L6; n=10; Rickett... 40 0.029
UniRef50_Q9RSL3 Cluster: 50S ribosomal protein L6; n=65; cellula... 40 0.038
UniRef50_O23049 Cluster: 50S ribosomal protein L6, chloroplast p... 40 0.038
UniRef50_Q7VQD3 Cluster: 50S ribosomal subunit protein L6; n=2; ... 40 0.050
UniRef50_A0YJS9 Cluster: 50S ribosomal protein L6; n=2; cellular... 40 0.050
UniRef50_Q7UN05 Cluster: 50S ribosomal protein L6; n=3; Planctom... 40 0.050
UniRef50_Q9A8T8 Cluster: 50S ribosomal protein L6; n=16; Bacteri... 40 0.050
UniRef50_Q8KAI6 Cluster: 50S ribosomal protein L6; n=15; Bacteri... 39 0.066
UniRef50_Q98PZ7 Cluster: 50S ribosomal protein L6; n=29; Bacteri... 39 0.088
UniRef50_Q9ZI38 Cluster: 50S ribosomal protein L6; n=2; Aquifex ... 38 0.12
UniRef50_O67565 Cluster: 50S ribosomal protein L6; n=1; Aquifex ... 38 0.15
UniRef50_UPI0000499CA8 Cluster: BspA-like leucine rich repeat pr... 38 0.20
UniRef50_Q6E783 Cluster: Ribosomal protein L6; n=5; Oomycetes|Re... 37 0.35
UniRef50_Q8DML8 Cluster: 50S ribosomal protein L6; n=4; cellular... 37 0.35
UniRef50_Q6Q8X3 Cluster: 50S ribosomal protein L6; n=6; Proteoba... 36 0.47
UniRef50_Q5FM76 Cluster: 50S ribosomal protein L6; n=10; Firmicu... 36 0.47
UniRef50_Q1XDI8 Cluster: Chloroplast 50S ribosomal protein L6; n... 36 0.62
UniRef50_Q1ZBZ7 Cluster: 50S ribosomal protein L6; n=1; Psychrom... 35 1.4
UniRef50_Q11HR7 Cluster: 50S ribosomal protein L6; n=73; Proteob... 35 1.4
UniRef50_Q4G353 Cluster: Chloroplast 50S ribosomal protein L6; n... 35 1.4
UniRef50_Q4QI55 Cluster: Putative uncharacterized protein; n=3; ... 34 1.9
UniRef50_Q5PA73 Cluster: 50S ribosomal protein L6; n=6; Anaplasm... 34 2.5
UniRef50_O21255 Cluster: Mitochondrial 60S ribosomal protein L6;... 34 2.5
UniRef50_Q7NEG7 Cluster: 50S ribosomal protein L6; n=19; Bacteri... 34 2.5
UniRef50_A6DRC5 Cluster: 50S ribosomal protein L6; n=1; Lentisph... 33 3.3
UniRef50_Q1MPQ0 Cluster: 50S ribosomal protein L6; n=1; Lawsonia... 33 3.3
UniRef50_P47412 Cluster: 50S ribosomal protein L6; n=6; Mycoplas... 33 4.4
UniRef50_Q74L75 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 33 4.4
UniRef50_Q2IJ73 Cluster: 50S ribosomal protein L6; n=6; Bacteria... 33 4.4
UniRef50_UPI000049A156 Cluster: ankyrin; n=9; Entamoeba histolyt... 33 5.8
UniRef50_Q8TMD2 Cluster: Putative uncharacterized protein; n=3; ... 33 5.8
UniRef50_Q1RK02 Cluster: Ankyrin repeat; n=2; Rickettsia bellii|... 32 7.6
UniRef50_Q4UCX9 Cluster: Glutamate-cysteine ligase, putative; n=... 32 7.6
UniRef50_Q2S3P9 Cluster: 50S ribosomal protein L6; n=1; Saliniba... 32 7.6
>UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17;
Eukaryota|Rep: 60S ribosomal protein L9 - Drosophila
melanogaster (Fruit fly)
Length = 190
Score = 270 bits (663), Expect = 1e-71
Identities = 129/170 (75%), Positives = 147/170 (86%)
Frame = +2
Query: 38 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 217
M+ I +NQ VKIP + VK+R+VT+ G RG LKR+FKHLA+D+ M + R LKVEKWFG
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWFG 60
Query: 218 SKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKY 397
+KKELAAVRTVCSH+ENMIKGVT GFQYKMRAVYAHFPINCVT+E N++IEIRNFLGEKY
Sbjct: 61 TKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKY 120
Query: 398 IRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNKDI 547
IRRV+MAPGVTVVNS QKDELI+EGN +E VS SAALIQQSTTV NKDI
Sbjct: 121 IRRVEMAPGVTVVNSTAQKDELIVEGNDIESVSGSAALIQQSTTVKNKDI 170
>UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86;
Eukaryota|Rep: 60S ribosomal protein L9 - Homo sapiens
(Human)
Length = 192
Score = 227 bits (555), Expect = 1e-58
Identities = 107/172 (62%), Positives = 137/172 (79%), Gaps = 2/172 (1%)
Frame = +2
Query: 38 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL--LKVEKW 211
MK I++NQ V IP+ + + +K R V VKGPRG L+R+F H+ V++ ++ + L+V+KW
Sbjct: 1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKW 60
Query: 212 FGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGE 391
+G++KELA VRT+CSHV+NMIKGVT GF+YKMR+VYAHFPIN V E S++EIRNFLGE
Sbjct: 61 WGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGE 120
Query: 392 KYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNKDI 547
KYIRRV+M PGV S QKDELI+EGN +E VS+SAALIQQ+TTV NKDI
Sbjct: 121 KYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDI 172
>UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55;
Eukaryota|Rep: 60S ribosomal protein L9 - Oryza sativa
subsp. japonica (Rice)
Length = 190
Score = 207 bits (506), Expect = 1e-52
Identities = 97/171 (56%), Positives = 132/171 (77%), Gaps = 1/171 (0%)
Frame = +2
Query: 38 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNP-RLLKVEKWF 214
MK I+A++ ++IP+G+TV V +++VTV+GPRG L RNFKHL +D +++ R L+V+ WF
Sbjct: 1 MKTILASETMEIPEGVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLLEGGRKLQVDAWF 60
Query: 215 GSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 394
G+++ +AA+RT SHV+N+I GVTKG++YKMR VYAHFPIN T N+ IEIRNFLGEK
Sbjct: 61 GTRRTMAAIRTAISHVQNLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNFLGEK 120
Query: 395 YIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNKDI 547
+R+V M GVT++ S K KDEL+++GN +E VS SAALI Q V NKDI
Sbjct: 121 KVRKVDMLEGVTILRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDI 171
>UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 191
Score = 184 bits (447), Expect = 2e-45
Identities = 92/172 (53%), Positives = 121/172 (70%), Gaps = 2/172 (1%)
Frame = +2
Query: 38 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 217
MK I Q++++P+G+TV +KSR+V V GPRG L +N KH+ V VN +L+KV G
Sbjct: 1 MKYIQTEQQIEVPEGVTVSIKSRIVKVVGPRGTLTKNLKHIDVTFTKVNNQLIKVAVHNG 60
Query: 218 SKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPI--NCVTTEGNSIIEIRNFLGE 391
+K +AA+RTV S V+NMI GVTKG++YKMR VYAHFPI N V +G IE+RNFLG+
Sbjct: 61 GRKHVAALRTVKSLVDNMITGVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGD 120
Query: 392 KYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNKDI 547
K IR V + GVT+ S KDE+++ GNS+EDVS +AA +QQ V NKDI
Sbjct: 121 KKIRNVPVRDGVTIEFSTNVKDEIVLSGNSVEDVSQNAADLQQICRVRNKDI 172
>UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L9 - Dictyostelium discoideum AX4
Length = 206
Score = 178 bits (434), Expect = 6e-44
Identities = 78/155 (50%), Positives = 111/155 (71%)
Frame = +2
Query: 83 LTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHV 262
+TV VK R V V GPRG L ++F H +VDI +V + L V+ WFG++K++A ++T+ S +
Sbjct: 34 VTVDVKGRSVKVTGPRGTLSKSFDHASVDINLVGKKELTVDLWFGNRKQIACIKTITSII 93
Query: 263 ENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNS 442
ENMI GVTKG++YKMR VYAHFPIN T+G ++EIRNF GEK +RR+++ G+T +
Sbjct: 94 ENMITGVTKGYEYKMRFVYAHFPINVAVTDGGRVVEIRNFFGEKIVRRIELLDGITCYRN 153
Query: 443 PKQKDELIIEGNSLEDVSSSAALIQQSTTVXNKDI 547
K KDE+++ GNSLE +S S A IQ + + KD+
Sbjct: 154 EKAKDEIVLTGNSLELLSQSCATIQLRSAIKYKDV 188
>UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 190
Score = 178 bits (433), Expect = 8e-44
Identities = 88/169 (52%), Positives = 118/169 (69%)
Frame = +2
Query: 41 KQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGS 220
+ I ++ + IP G+TV +K+R VTV GPRG LK+N +H+ ++++ +K W GS
Sbjct: 3 RDIYKDETLTIPKGVTVDIKARNVTVTGPRGTLKQNLRHVDIEMKKQG-NTIKFIVWHGS 61
Query: 221 KKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYI 400
+K A +R+V S + NMI GVT+GF+YKMR VYAHFPIN TE +++EIRNFLGE+
Sbjct: 62 RKHNACIRSVYSIINNMIIGVTQGFRYKMRLVYAHFPININLTENGTVVEIRNFLGERIT 121
Query: 401 RRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNKDI 547
R +K PGVTV S KDE+I+EGNSLE+VS SAA I+Q V NKDI
Sbjct: 122 RVIKCLPGVTVSISSAVKDEIILEGNSLENVSQSAANIKQICNVRNKDI 170
>UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonchus
contortus|Rep: 60S ribosomal protein L9 - Haemonchus
contortus (Barber pole worm)
Length = 141
Score = 167 bits (407), Expect = 1e-40
Identities = 74/126 (58%), Positives = 96/126 (76%)
Frame = +2
Query: 38 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 217
MK + +N V PDG+T VK+R+V V GPRG LKR+F+HL +++ V L+V KWFG
Sbjct: 1 MKLVESNDTVDFPDGVTFTVKNRVVHVTGPRGTLKRDFRHLHMEMERVGKNQLRVRKWFG 60
Query: 218 SKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKY 397
+KE+AA+RTVCSH++NMIKGVTKGF+YKMR+VYAHFPIN +G +EIRNFLGEK
Sbjct: 61 VRKEIAAIRTVCSHIQNMIKGVTKGFRYKMRSVYAHFPINVTLQDGGRTVEIRNFLGEKI 120
Query: 398 IRRVKM 415
+R V +
Sbjct: 121 VRPVPL 126
>UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_108_35846_36403 - Giardia lamblia
ATCC 50803
Length = 185
Score = 161 bits (392), Expect = 7e-39
Identities = 78/167 (46%), Positives = 104/167 (62%)
Frame = +2
Query: 47 IVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKK 226
+ ++ +K+P + + R+VTVKG +G L R+F H +DI N + V WF K
Sbjct: 3 LCSSMTIKVPTDVECTINKRVVTVKGKKGTLVRDFSHAPLDITHANDTI-SVAVWFPRGK 61
Query: 227 ELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRR 406
A RT+CSH+ENM KGVT GF+YKMR YAHFPI + N IEIRNF+ + RR
Sbjct: 62 RNALPRTICSHIENMFKGVTYGFEYKMRLAYAHFPIAATVVDNNKAIEIRNFMHQIKTRR 121
Query: 407 VKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNKDI 547
++ PGVT+ S KDELI+ G S+EDVS +AA I +S V NKD+
Sbjct: 122 IECLPGVTIAMSTNVKDELILRGISIEDVSHTAARIHESLKVPNKDL 168
>UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L9 - Entamoeba histolytica HM-1:IMSS
Length = 197
Score = 151 bits (366), Expect = 1e-35
Identities = 75/172 (43%), Positives = 109/172 (63%), Gaps = 9/172 (5%)
Frame = +2
Query: 59 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI-------RMVNPR--LLKVEKW 211
+ V IP+G+ + + + + V GPRG L R F+H VDI + P+ ++ ++ W
Sbjct: 9 EHVVIPEGVNIEINRKNIKVTGPRGSLTREFQHPKVDIYASKLVVKKEGPKENVVVIDMW 68
Query: 212 FGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGE 391
+G++++ A VRT+ SH++NMI GVTKG+QYKMR VYAHFP+ V + I+++NFLGE
Sbjct: 69 YGNRRDSAVVRTIASHIKNMITGVTKGYQYKMRVVYAHFPVTLVIADDGKSIQVQNFLGE 128
Query: 392 KYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNKDI 547
K R ++M GV V KDE+ +EGN +E VS SAA I + V NKDI
Sbjct: 129 KRTRHIEMYDGVVV--KKLGKDEICLEGNDVEKVSQSAANIHAANLVRNKDI 178
>UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=6; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_51, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 196
Score = 144 bits (350), Expect = 9e-34
Identities = 77/180 (42%), Positives = 111/180 (61%), Gaps = 10/180 (5%)
Frame = +2
Query: 38 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM---VNPR------ 190
MK I+ + V IP+ + + KS++V VKGPRG L +NF+H A+DI++ VN +
Sbjct: 1 MKYILTEEHVPIPEKIEITQKSKVVKVKGPRGELTKNFRHSALDIQVQKKVNKKNNVAKS 60
Query: 191 LLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIE 370
+ V W +K+ V +V S + NMI+GVT G+++KM YAHFPI +E
Sbjct: 61 RVSVRMWQSYRKQRCQVNSVASQIRNMIRGVTTGYKFKMVLAYAHFPIIINLIGNGQGVE 120
Query: 371 IRNFLGEKYIRRVKMAPGVTVV-NSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNKDI 547
I+NFLGEK IR +K PGVT+ N ++K+ L ++GN L +VS + ALI Q+ V NKDI
Sbjct: 121 IKNFLGEKIIRTIKCLPGVTITRNEAEEKNVLTLQGNDLNNVSLTCALIHQACAVKNKDI 180
>UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillardia
theta|Rep: 60S ribosomal protein L9 - Guillardia theta
(Cryptomonas phi)
Length = 188
Score = 138 bits (335), Expect = 6e-32
Identities = 69/171 (40%), Positives = 104/171 (60%), Gaps = 1/171 (0%)
Frame = +2
Query: 38 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL-LKVEKWF 214
M I +K+KIP + + K+R ++ G G + R+F+ + IR + + + W
Sbjct: 1 MLTIKTIRKIKIPKNVKIKTKARKISATGSLGSIIRSFEKTQISIRYFEKKKEIILLLWM 60
Query: 215 GSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 394
KK+LA + T+ SH+ NMI GV+ GF+Y ++ +YAHFPIN T+ S +EIRNFLGEK
Sbjct: 61 AGKKQLAKLNTIASHITNMIVGVSLGFEYILQPIYAHFPINLSITDDGSCLEIRNFLGEK 120
Query: 395 YIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNKDI 547
IR++ M GV + + +KDE+ + G+ L VS +AA IQQS NKD+
Sbjct: 121 RIRKIYMGQGVKIKKNEAKKDEISVFGSDLNLVSLNAASIQQSCQAKNKDL 171
>UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 252
Score = 136 bits (329), Expect = 3e-31
Identities = 67/141 (47%), Positives = 91/141 (64%), Gaps = 3/141 (2%)
Frame = +2
Query: 134 VLKRNFKHLAVDIRMVNP---RLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYK 304
V +++ KH+ +D R++ + +K W +K A +RT + V NMIKGVT GFQYK
Sbjct: 92 VSQQSLKHMNLDARIIKSPAGQKIKFVVWHAGRKHAACLRTAQACVANMIKGVTVGFQYK 151
Query: 305 MRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSL 484
MRAVYAHFPIN + EIRNFLGEK +R + M GVT+ QKD++++EGN +
Sbjct: 152 MRAVYAHFPINIIIAGDKKSAEIRNFLGEKRVRNIAMLEGVTIQEDKAQKDQVLVEGNDI 211
Query: 485 EDVSSSAALIQQSTTVXNKDI 547
+ VS SAAL+ +T V NKDI
Sbjct: 212 DLVSQSAALLHGATLVRNKDI 232
Score = 33.9 bits (74), Expect = 2.5
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +2
Query: 38 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRN 148
M QI + +P ++V V SR+ TVKGPRG L ++
Sbjct: 1 MLQIFKELDLAVPADVSVSVSSRVFTVKGPRGSLTKS 37
>UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3;
Archaea|Rep: 50S ribosomal protein L6P - Pyrococcus
kodakaraensis (Thermococcus kodakaraensis)
Length = 184
Score = 128 bits (308), Expect = 1e-28
Identities = 68/162 (41%), Positives = 106/162 (65%)
Frame = +2
Query: 59 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 238
++++IP+G+ V V+ V VKGP+G L+R K+ V I + +++ + K F KK++A
Sbjct: 9 EEIEIPEGVEVTVEGNTVKVKGPKGELQRELKYPGVQIFTEDGKVV-IYKEFPRKKDVAI 67
Query: 239 VRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMA 418
VRT +H+ NMIKGVT+GF+Y+++ VY+HFP+ V +G+ ++ I NFLGEK RR K+
Sbjct: 68 VRTFKAHINNMIKGVTEGFKYRLKVVYSHFPMT-VKVQGDEVV-IENFLGEKNPRRAKIL 125
Query: 419 PGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNKD 544
PGVTV + E+ +EG E V +AA I+Q+T + D
Sbjct: 126 PGVTV---KVKGSEIEVEGIDKEAVGQTAANIEQATRITKWD 164
>UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Pyrococcus furiosus
Length = 184
Score = 125 bits (302), Expect = 6e-28
Identities = 69/162 (42%), Positives = 104/162 (64%)
Frame = +2
Query: 59 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 238
++V+IP+G+ V V+ V VKGP+G L+R F + I + ++ + K F +K++A
Sbjct: 9 EEVEIPEGVEVTVEGYKVKVKGPKGELEREFFWPGIQIFTEDGNVV-IYKDFPRRKDVAI 67
Query: 239 VRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMA 418
RT +H+ NMIKGVT+GF YK++ VY+HFPI+ V +G+ +I I NFLGEK R+ K+
Sbjct: 68 ARTFAAHIRNMIKGVTEGFTYKLKVVYSHFPIS-VKVQGDEVI-IENFLGEKAPRKAKIL 125
Query: 419 PGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNKD 544
PGVTV + E+I+EG E V +AA I+Q+T + D
Sbjct: 126 PGVTV---KVRGQEIIVEGIDKEAVGQTAANIEQATRITKWD 164
>UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S ribosomal
protein L9, partial; n=1; Macaca mulatta|Rep: PREDICTED:
similar to 60S ribosomal protein L9, partial - Macaca
mulatta
Length = 179
Score = 122 bits (293), Expect = 7e-27
Identities = 64/120 (53%), Positives = 80/120 (66%), Gaps = 4/120 (3%)
Frame = +2
Query: 38 MKQIVANQKVKIP-DGLTVHV--KSRLVTVKGPRGVLKRNFKHLAVDIRMVNP-RLLKVE 205
MK I + ++IP DG TV V KSR + V G G L+R F+H+ VD+++V R + VE
Sbjct: 60 MKTIHSQIDIQIPEDGSTVKVTLKSRHIVVSGKYGKLERTFRHIPVDMKLVEDGRKITVE 119
Query: 206 KWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFL 385
WFG K A +RTVCSH+ENMI GV + +QYK+R VYAHFPIN T S IEIRNFL
Sbjct: 120 MWFGLTKNKACIRTVCSHIENMITGVRQRYQYKLRFVYAHFPINSNITNDGSTIEIRNFL 179
>UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2;
Thermoprotei|Rep: Ribosomal protein L6 - Thermofilum
pendens (strain Hrk 5)
Length = 191
Score = 115 bits (276), Expect = 8e-25
Identities = 67/169 (39%), Positives = 104/169 (61%), Gaps = 1/169 (0%)
Frame = +2
Query: 38 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLA-VDIRMVNPRLLKVEKWF 214
M+ + + V IP+G+ VHV + V V+GP G ++++F H + IR V + VE +
Sbjct: 1 MRVLQKTESVPIPEGVKVHVNGKRVEVEGPLGKVEKDFSHARRISIR-VEGNSVVVETFH 59
Query: 215 GSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 394
+KK+ A V T+ S + NMI GVTKG++YK++ VYAHFP++ + E + II I NFLGE+
Sbjct: 60 ATKKDYALVGTIASIINNMIIGVTKGYRYKLKIVYAHFPMS-LKVEKDKII-IENFLGER 117
Query: 395 YIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNK 541
R + PG V +KD++I+EG L+ V+ +AA I +T + K
Sbjct: 118 GKRIAGIMPGAKV---KIEKDDVIVEGIDLDAVAQTAANIHLATHLRGK 163
>UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L9 -
Encephalitozoon cuniculi
Length = 204
Score = 114 bits (274), Expect = 1e-24
Identities = 67/176 (38%), Positives = 99/176 (56%), Gaps = 2/176 (1%)
Frame = +2
Query: 23 KQSPNMKQIVANQKVKIPDGLTVHVKSRLVTVKGPRG-VLKRNFKH-LAVDIRMVNPRLL 196
K P M+ I+ + VK+P+ T + ++ T +GP+G +++ +H L DI N +
Sbjct: 17 KDLPLMR-ILVTRIVKVPEDCTATQEGKIFTFQGPKGSIVEDCTRHPLTFDIHEGN---I 72
Query: 197 KVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIR 376
++ W G +K +A TV S + N IK VT GF Y M+AVY HF IN E I+ ++
Sbjct: 73 RIRLWNGKRKAMALAITVESLLRNAIKAVTVGFAYTMKAVYNHFSINMEIKEDGKILLVK 132
Query: 377 NFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNKD 544
NFLGEK ++R +M G V ++KD ++IEG SL DVS SA I N+D
Sbjct: 133 NFLGEKNVKRFRMR-GAARVRLDERKDTIVIEGPSLSDVSQSAGTITNECKAKNRD 187
>UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2;
Methanomicrobiales|Rep: 50S ribosomal protein L6P -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 174
Score = 105 bits (253), Expect = 5e-22
Identities = 62/162 (38%), Positives = 96/162 (59%)
Frame = +2
Query: 59 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 238
++V+IP G+ V + ++TV GP+G L R+ + +D+ MV + V K+ LA
Sbjct: 5 RQVEIPPGVDVTLDGGVLTVSGPKGTLVRDMRFPQIDL-MVEGGEVVVSTASEKKRILAM 63
Query: 239 VRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMA 418
T+ +H +NMI+GV G++Y+M+ VY+HFPI + +GN +EI NFLGEK R K+
Sbjct: 64 TGTLEAHAKNMIRGVADGYEYRMKVVYSHFPIQ-LKQQGNR-LEITNFLGEKQPRIAKII 121
Query: 419 PGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNKD 544
GVTV DE+ I G E V ++AA I+ +T + +D
Sbjct: 122 EGVTVKIG---NDEVTITGIDKEKVGNTAANIEHATRITKRD 160
>UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8;
Thermoprotei|Rep: 50S ribosomal protein L6P - Sulfolobus
acidocaldarius
Length = 189
Score = 103 bits (248), Expect = 2e-21
Identities = 52/170 (30%), Positives = 106/170 (62%), Gaps = 1/170 (0%)
Frame = +2
Query: 38 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM-VNPRLLKVEKWF 214
+K ++++IPD + V +++ ++ VKGP+G + ++F + A IR+ +N + +E F
Sbjct: 4 LKAAYIREEIQIPDKVKVSLENNVLKVKGPKGEVIKDFSY-AKGIRIQLNEGKIILETTF 62
Query: 215 GSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 394
+++ A + ++ +H++NMI G G++Y ++ + HFPI+ V G+ +++ N +GEK
Sbjct: 63 ADRRKKALLYSIIAHIKNMITGTINGYRYYLKVISTHFPIS-VKVSGDE-VQVSNLIGEK 120
Query: 395 YIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNKD 544
IRR K+ PGV V + +++++EG+ + +V+ +AA I+ ST + D
Sbjct: 121 NIRRAKILPGVKVT---VKGEDIVVEGSDIYNVAQTAANIESSTKIVGYD 167
>UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 197
Score = 103 bits (246), Expect = 4e-21
Identities = 62/177 (35%), Positives = 94/177 (53%), Gaps = 8/177 (4%)
Frame = +2
Query: 41 KQIVANQKVKIPDGLTVHVKSRLVTVK--GPR----GVLKRNFKHLAVDIRM-VNPRLLK 199
+ ++ + KIP+ + VKS +VT++ P+ L ++ HL +D N +
Sbjct: 3 RPVLHQEHFKIPENIKCTVKSGVVTIEHQDPKDKKTSKLVKDLSHLKLDFEYDENDHQIV 62
Query: 200 VEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRN 379
WFG++K LA + T+ V+NMI GVT G++YKM VY+HFPI +E +
Sbjct: 63 ARCWFGNRKLLARIGTLFGIVKNMITGVTLGWRYKMHFVYSHFPIKHTCSEDGRTFDFNG 122
Query: 380 FLGEKYIRRVKMAPGVTV-VNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNKDI 547
F+G K + V GV + N KDE+ IEG +LEDVS I Q T + +KD+
Sbjct: 123 FMGHKEHKIVTAPEGVRIWSNESVAKDEINIEGANLEDVSLVCGQIHQLTKIKDKDL 179
>UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4;
Methanomicrobia|Rep: 50S ribosomal protein L6P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 176
Score = 101 bits (241), Expect = 1e-20
Identities = 59/160 (36%), Positives = 96/160 (60%)
Frame = +2
Query: 65 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 244
++IP+G++V + + T KGP+G ++R F + + I + ++ V+ K++ A V
Sbjct: 9 IEIPEGVSVSLSQDVFTAKGPKGTVERTFWYPGIKIEVREGEVV-VDAESSRKEQKAMVG 67
Query: 245 TVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPG 424
T SH++N+I GV++GF+ KM VYAHFP+ V EG +++ I NFLGEK R K+ G
Sbjct: 68 TFASHLKNLIIGVSEGFECKMNIVYAHFPMQ-VKVEGKTLV-IGNFLGEKKPRIAKIL-G 124
Query: 425 VTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNKD 544
T V +E+++ G + EDV +AA I+Q T + D
Sbjct: 125 ETKVK--VSGNEIVVSGINKEDVGQTAANIEQKTKIKRFD 162
>UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=3; Euarchontoglires|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 145
Score = 99.1 bits (236), Expect = 6e-20
Identities = 57/108 (52%), Positives = 70/108 (64%)
Frame = +2
Query: 224 KELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIR 403
KELA VRT+CSHV+NMIKGV+ GF+YK+R+VYAHFP+N
Sbjct: 30 KELATVRTICSHVQNMIKGVSLGFRYKVRSVYAHFPLNV--------------------- 68
Query: 404 RVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNKDI 547
V+M GV S QKDELI+EGN E VS+SAALIQ++T V N+DI
Sbjct: 69 -VQMRTGVACSVSQAQKDELILEGNDTELVSNSAALIQKATAVENQDI 115
>UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L6P -
Nanoarchaeum equitans
Length = 192
Score = 98.3 bits (234), Expect = 1e-19
Identities = 53/171 (30%), Positives = 96/171 (56%), Gaps = 3/171 (1%)
Frame = +2
Query: 38 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 217
M+ + ++ IP+ + V ++ ++ V GP+G ++R F H + + VN + +E +F
Sbjct: 1 MRIPIIKYEIPIPENVKVSYENNILKVSGPKGEVERKFYHPLIKLS-VNDNKIILETYFA 59
Query: 218 SKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK- 394
+++E + T SH++NM++GV F Y+++ Y HFP+ V EGN +I + NFLGEK
Sbjct: 60 TRREKRLINTWRSHIKNMLEGVQNPFVYRLKVCYTHFPMR-VKLEGNKLI-VENFLGEKA 117
Query: 395 -YIRRVKMAPGVTV-VNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNK 541
I+ + V V + K + E+++E E A++I+QST +K
Sbjct: 118 PIIKELPYLDKVKVKIEQNKDETEIVVESPDKEKAGIVASMIEQSTRFLHK 168
>UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella
natans|Rep: Ribosomal protein L9 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 190
Score = 97.9 bits (233), Expect = 1e-19
Identities = 52/171 (30%), Positives = 89/171 (52%), Gaps = 2/171 (1%)
Frame = +2
Query: 38 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI--RMVNPRLLKVEKW 211
MK ++ + +P + + +K + + KG G L + F + V+I + + L V +
Sbjct: 1 MKHVLVQSIINVPKDVKIRIKEKTIYTKGINGELSKKFNNKNVNIIYKKNDSNSLIVRCY 60
Query: 212 FGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGE 391
+ +K A VRT+ S + NMI GV+KGF Y ++ VY+HFPI+ + + +EI N G
Sbjct: 61 YNNKSSSAIVRTITSIIYNMIIGVSKGFTYLLKIVYSHFPISVKYIQNENTLEITNLFGL 120
Query: 392 KYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNKD 544
K I + V V + K E+I+ +E + ++LIQ ++ NKD
Sbjct: 121 KRIDSFFIPSSVQVCTNNLNKKEIILLSKDIETLGILSSLIQNKCSINNKD 171
>UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5;
Thermoproteaceae|Rep: 50S ribosomal protein L6P -
Pyrobaculum aerophilum
Length = 196
Score = 93.5 bits (222), Expect = 3e-18
Identities = 56/168 (33%), Positives = 101/168 (60%), Gaps = 5/168 (2%)
Frame = +2
Query: 38 MKQIVANQKVKIPDGLTVHVKSR-----LVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKV 202
M+ + + ++V+IP G++V ++ +V VKGP G + + FK+ V + + + +++ +
Sbjct: 1 MRVVYSVEEVEIPKGVSVSIERTGPFDYIVKVKGPLGEVTKEFKNTPVVMSLQDGKIV-M 59
Query: 203 EKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNF 382
E + K+E A + T ++NM GVT+G++YK++ +Y HFP+ V +GN ++ I NF
Sbjct: 60 EVFKARKREYAILGTYKGILKNMFLGVTRGWRYKLKVIYTHFPM-LVKVQGNQLV-IENF 117
Query: 383 LGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQST 526
LG K + + GV V K K++++IEG E VS+ AA +Q +T
Sbjct: 118 LGRKSKITLNIPKGVKV--EVKGKEDIVIEGIDRELVSTFAAAVQAAT 163
>UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Archaeoglobus fulgidus
Length = 196
Score = 93.5 bits (222), Expect = 3e-18
Identities = 58/172 (33%), Positives = 97/172 (56%), Gaps = 5/172 (2%)
Frame = +2
Query: 44 QIVANQKVKIPDGLTVHVKS---RLVTVK--GPRGVLKRNFKHLAVDIRMVNPRLLKVEK 208
++ + V++P+ + + ++ R T+K GP+G R K+ V I + + ++ +V
Sbjct: 17 EVYEERVVEVPEDVQLTIEGDSFRGYTLKAVGPKGENTRYLKYRGVFIEVGDGKV-RVYT 75
Query: 209 WFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLG 388
KK A V T H+EN+I GV +GF+Y ++ VYAHFPI V EGN +I I NF+G
Sbjct: 76 TSPKKKHKAMVGTFAGHIENLITGVKEGFEYHLKVVYAHFPIK-VRVEGNEVI-IENFIG 133
Query: 389 EKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNKD 544
EK+ RR K+ V S + ++ + G +E+ +AA ++Q+T + KD
Sbjct: 134 EKHPRRAKIVGRAQVEISGQ---DIYVRGIDIEECGQTAANLEQATKIKRKD 182
>UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L6
- Candidatus Nitrosopumilus maritimus SCM1
Length = 185
Score = 89.8 bits (213), Expect = 4e-17
Identities = 52/161 (32%), Positives = 93/161 (57%)
Frame = +2
Query: 62 KVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 241
+V+IP+G+TV ++ +GP G +NF+++ V I + + ++ ++ K++ A +
Sbjct: 12 QVEIPEGVTVTQNKNMLLFEGPLGKTHKNFRNIPVKIEIADGKV-NLKTIGERKRDYAIL 70
Query: 242 RTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAP 421
T S + N+ +G+ +G+ KM+ V+AHFPI V EG I+ I NF GE+ R +
Sbjct: 71 HTARSIIRNICEGLVEGYTIKMKVVFAHFPIT-VKVEGKKIL-IENFQGERAPRSTHIMG 128
Query: 422 GVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNKD 544
V+ PK +D +++ G D++ +AA I+ +T V NKD
Sbjct: 129 NTKVI--PKGED-VLLTGEVWTDITQTAANIELTTKVKNKD 166
>UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1;
Cenarchaeum symbiosum|Rep: Ribosomal protein L6P/L9E -
Cenarchaeum symbiosum
Length = 165
Score = 89.8 bits (213), Expect = 4e-17
Identities = 55/148 (37%), Positives = 89/148 (60%), Gaps = 1/148 (0%)
Frame = +2
Query: 104 RLVTVKGPRGVLKRNFKHLAVDIRMVNPRL-LKVEKWFGSKKELAAVRTVCSHVENMIKG 280
R++ VKG G ++F+ + V IR+ + LK E K++LA + T S V N+ +G
Sbjct: 8 RMLHVKGKLGSAHKSFRKIPVGIRIDGSSVVLKAEGT--RKRDLAILNTARSIVRNLCEG 65
Query: 281 VTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDE 460
V G+ K++ VYAHFPI + +G ++I + NF GE+ R+ K+ G VV+ + ++
Sbjct: 66 VGVGYTIKLKVVYAHFPIT-IKQDG-AMILVENFQGERSARKAKIVGGTKVVS---KGED 120
Query: 461 LIIEGNSLEDVSSSAALIQQSTTVXNKD 544
+I+ G+ L DVS +AA ++Q T V NKD
Sbjct: 121 VIVTGHVLTDVSQTAANLEQGTKVKNKD 148
>UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2;
environmental samples|Rep: 50S ribosomal protein L6P -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 188
Score = 89.4 bits (212), Expect = 5e-17
Identities = 55/163 (33%), Positives = 86/163 (52%), Gaps = 2/163 (1%)
Frame = +2
Query: 62 KVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 241
K+ +P+G+T V VTV L R F+H +++R + L +V KKE A
Sbjct: 10 KISLPEGVTAAVNGNDVTVAKDGNSLTREFRHPRIEVRDSSGEL-EVFVNLPRKKEKALA 68
Query: 242 RTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAP 421
T +H+ NM +GV GF+YK++AVY+HFP+ + GN + + N GEK + RV P
Sbjct: 69 GTWAAHLTNMARGVDSGFEYKLKAVYSHFPMT-IRVNGNQ-MTVTNLFGEK-VPRVAALP 125
Query: 422 --GVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNKD 544
V + K ++ + G E V +AA I++S + N+D
Sbjct: 126 WSPAEVEVKVQNKTDVTVSGADREKVGQTAANIERSCRIKNRD 168
>UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A,
Solution Structure Of The N-Terminal Domain Of Human
Ribosomal Protein L9; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to Chain A, Solution Structure Of The
N-Terminal Domain Of Human Ribosomal Protein L9 -
Ornithorhynchus anatinus
Length = 143
Score = 88.2 bits (209), Expect = 1e-16
Identities = 42/87 (48%), Positives = 61/87 (70%), Gaps = 2/87 (2%)
Frame = +2
Query: 38 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLK--VEKW 211
MK I++NQ V IP + + +K R V VKGP+G L R+F H+ V++ ++ +L K V+KW
Sbjct: 1 MKTILSNQTVDIPANIGIILKGRTVIVKGPQGSLHRDFNHINVELSLLGKKLKKFHVDKW 60
Query: 212 FGSKKELAAVRTVCSHVENMIKGVTKG 292
+G++KELA V T+CS V+N IK VT G
Sbjct: 61 WGNRKELATVHTICSPVQNTIKWVTLG 87
>UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L6P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 178
Score = 88.2 bits (209), Expect = 1e-16
Identities = 54/162 (33%), Positives = 90/162 (55%)
Frame = +2
Query: 62 KVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 241
+++IP+ + +TV+G G + R + +D+ V+ + +E + K ++ +
Sbjct: 5 ELEIPEDVDAEQDHLDITVEGDNGSVTRRLWYPDIDVS-VDGDTVVIESDEDNAKTMSTI 63
Query: 242 RTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAP 421
T SH+ENM GVT+G++Y M Y+HFP+ V EG+ ++ I NFLGEK RR +
Sbjct: 64 GTFQSHIENMFHGVTEGWEYGMEVFYSHFPMQ-VNVEGDEVV-IENFLGEKAPRRTTI-H 120
Query: 422 GVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNKDI 547
G T V +EL + G +E V +AA I+Q T + +KD+
Sbjct: 121 GDTDVEI--DGEELTVSGPDIEAVGQTAADIEQLTRINDKDV 160
>UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellular
organisms|Rep: 50S ribosomal protein L6P - Methanopyrus
kandleri
Length = 204
Score = 83.0 bits (196), Expect = 4e-15
Identities = 51/172 (29%), Positives = 95/172 (55%), Gaps = 6/172 (3%)
Frame = +2
Query: 47 IVANQKVKIPDGLTVHVKSRL-----VTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKW 211
IV ++VKI D + + + R VTVKGP+G + + F + V + + + ++ +
Sbjct: 17 IVMEERVKIKDDVEIEISQREDRRYEVTVKGPKGEVTKEFYYPDVYLWVEDDEVV-IAAT 75
Query: 212 FGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGE 391
++++ A + + +++ENM KGVT+G +YK++ VY+HFP + + I NF+GE
Sbjct: 76 RSNRRQKAILGMIKAYIENMQKGVTEGHEYKLKLVYSHFPPEVKVDQKEGKVYIENFMGE 135
Query: 392 KYIRRVKMA-PGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNKD 544
R ++ P T V Q ++I+ G E V +AA ++Q+T + ++D
Sbjct: 136 NVPRVAEIVDPENTEV--IVQGQDIIVRGIDKEAVGQTAANLEQATYIKDRD 185
>UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1;
Thermoplasma volcanium|Rep: 50S ribosomal protein L6P -
Thermoplasma volcanium
Length = 178
Score = 77.8 bits (183), Expect = 2e-13
Identities = 48/160 (30%), Positives = 89/160 (55%)
Frame = +2
Query: 65 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 244
++IP + V + ++++ L++ F V + +V +K+ K + +E V
Sbjct: 10 IEIPKDVKVGLSGTMLSMTFGNKKLEKKFADNYVRL-LVEDNKIKIVKSKNNSRERGIVG 68
Query: 245 TVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPG 424
T S + NM+KG+ +GFQY+M+ Y+HFP+ V+ +G +++ I NF GE+ R ++ G
Sbjct: 69 TWASEISNMVKGLKEGFQYEMKIDYSHFPMR-VSVKGKTVV-IENFFGERSPRTAEIV-G 125
Query: 425 VTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNKD 544
T V+ + D L + G S +DV +AA I+++T + D
Sbjct: 126 ETQVS--VKGDRLFLNGPSKKDVGETAANIERATIIKGFD 163
>UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3;
Thermoplasmatales|Rep: 50S ribosomal protein L6P -
Picrophilus torridus
Length = 180
Score = 71.7 bits (168), Expect = 1e-11
Identities = 47/161 (29%), Positives = 82/161 (50%)
Frame = +2
Query: 62 KVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 241
++K+PD + +++ + +KG G R F+ V + +K+ +K V
Sbjct: 9 EIKLPDDVQATMENNELKIKGKLGEASRIFRDNYVKA-YIEGSSVKIATSKNNKYTKGIV 67
Query: 242 RTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAP 421
T S + +I+GVTKGF+Y M+ + HFP+ V+ G+ +I + NFLGEK R K+
Sbjct: 68 GTWYSETKLLIEGVTKGFEYHMKIDFTHFPMR-VSVRGDKLI-VENFLGEKSPRSAKIVD 125
Query: 422 GVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNKD 544
G V + D + I G + +AA I+++T + + D
Sbjct: 126 GCKV---SVKGDRITINGIDKRKIGETAANIERATYIRHFD 163
>UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal
protein L9; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L9 - Rattus norvegicus
Length = 77
Score = 60.1 bits (139), Expect = 3e-08
Identities = 35/84 (41%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Frame = +2
Query: 38 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL--LKVEKW 211
M+ I NQ VKIP+ + +V VK RG L+R+F H+ +++R++ R L+V+KW
Sbjct: 1 MRIIHINQAVKIPEN------AHIVIVKDTRGTLQRDFNHINIELRLLAKRKKQLQVDKW 54
Query: 212 FGSKKELAAVRTVCSHVENMIKGV 283
+ K LA T+ SHV+NMIK V
Sbjct: 55 LKTMK-LATAHTIYSHVQNMIKRV 77
>UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 92
Score = 59.3 bits (137), Expect = 6e-08
Identities = 28/71 (39%), Positives = 44/71 (61%)
Frame = +2
Query: 254 SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTV 433
+H+++ + GF Y+MR+VYA FP N + E S+IE + +G+KYI RV++ V
Sbjct: 21 NHLQSCSEHDQGGFHYRMRSVYAGFPTNVIIQENGSVIEHWSAMGKKYIHRVQIRTSVAF 80
Query: 434 VNSPKQKDELI 466
S QK+EL+
Sbjct: 81 YASQAQKNELM 91
>UniRef50_Q6E6D2 Cluster: Large subunit ribosomal protein L9e; n=1;
Antonospora locustae|Rep: Large subunit ribosomal
protein L9e - Antonospora locustae (Nosema locustae)
Length = 160
Score = 57.2 bits (132), Expect = 2e-07
Identities = 35/140 (25%), Positives = 72/140 (51%), Gaps = 2/140 (1%)
Frame = +2
Query: 38 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKH--LAVDIRMVNPRLLKVEKW 211
MK+++ +KV+IP+G +V + R++TV+G R R+ H L +D+ + RL ++
Sbjct: 1 MKRLLCEEKVEIPEGCSVEILERVMTVRGKRATAVRDLSHFVLTMDVHEGHVRL----RY 56
Query: 212 FGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGE 391
+++ VC +N I G G++Y +R + F +G +++ ++NFL
Sbjct: 57 GMAQQGAQQADYVCICDQNCIVGCMSGYEYTLRLCTSTFNERSDRDDGKTVV-VKNFLDR 115
Query: 392 KYIRRVKMAPGVTVVNSPKQ 451
+ K A + ++P++
Sbjct: 116 SMLGDTKCAETLLRGSAPRK 135
>UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6;
Proteobacteria|Rep: 50S ribosomal protein L6 -
Pseudomonas syringae pv. phaseolicola (strain 1448A /
Race 6)
Length = 179
Score = 53.6 bits (123), Expect = 3e-06
Identities = 45/157 (28%), Positives = 78/157 (49%), Gaps = 1/157 (0%)
Frame = +2
Query: 50 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPR-LLKVEKWFGSKK 226
VA VK+P G+ V + +L++VKGP+G L+ H +V++ +V L+ G ++
Sbjct: 4 VAKNPVKLPSGVEVKLVGQLLSVKGPKGTLEL-IIHSSVEVEIVEEAGELRFAARNGDQQ 62
Query: 227 ELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRR 406
A T + V NM++GV++GF+ K++ V + T N LG +
Sbjct: 63 TRAMAGTTRALVNNMVQGVSQGFERKLQLVGVGYKAQAKGTVLNLA------LGFSHPVD 116
Query: 407 VKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQ 517
++ G+T +P Q D ++I G + V AA I+
Sbjct: 117 YELPNGIT-AETPSQTD-ILIRGIDKQLVGQVAAEIR 151
>UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108;
Proteobacteria|Rep: 50S ribosomal protein L6 - Coxiella
burnetii
Length = 178
Score = 53.6 bits (123), Expect = 3e-06
Identities = 48/157 (30%), Positives = 76/157 (48%)
Frame = +2
Query: 50 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 229
VA +KIP G+ V+V + +TVKG G L R H AV + + L + S
Sbjct: 5 VAKNPIKIPTGVEVNVAGQQITVKGKLGTLTRVI-HRAVKVTKTDAELQTICA-NDSPGS 62
Query: 230 LAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRV 409
A T + + NM++GV GFQ K+ V + EG ++ +G + +
Sbjct: 63 NALAGTARAVLANMVQGVHTGFQRKLVMVGVGYR---AKAEGK---KLNLTVGLSHPVNI 116
Query: 410 KMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQ 520
+M G+T V +P Q E+I++G + VS AA I++
Sbjct: 117 EMPEGIT-VETPSQ-TEIIVKGADKQRVSQVAANIRE 151
>UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3;
Thermotogaceae|Rep: 50S ribosomal protein L6 - Petrotoga
mobilis SJ95
Length = 186
Score = 53.2 bits (122), Expect = 4e-06
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 6/92 (6%)
Frame = +2
Query: 50 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNF-KHLAVDIRMVNPRLLK----VEKWF 214
+A++ IPDG+ + V + + +KG G L N ++L VD R N ++K V K
Sbjct: 6 IADKPTIIPDGVELSVDGQTIKIKGKNGELSLNLPEYLEVD-RDNNELMIKTKEGVVKRS 64
Query: 215 GSKKELAAVR-TVCSHVENMIKGVTKGFQYKM 307
+K L A+R T SHV NMIKGVT+G++ ++
Sbjct: 65 SDEKRLKALRGTFTSHVRNMIKGVTEGYKKEL 96
>UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 140
Score = 51.6 bits (118), Expect = 1e-05
Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Frame = -2
Query: 547 DILIXDCSRLLDESSRARDIFQGVAFND*FILLFGRVNDSHTRCHLYPSDVFLPQEVTYL 368
DIL+ D + LL+ SS R+ FQGV N+ FILL R T S+ F QE++
Sbjct: 37 DILVSDTTDLLNISSILRNSFQGVTRNNQFILLSRRNFHGDTFMDFNFSNSFFTQEISNF 96
Query: 367 NN*ITL--SGDTVNGEVSIHSTHLVLEAFSYSFNHV 266
N +T+ + VN E+ I+ +HLV FS + + V
Sbjct: 97 NVILTIFFNNVNVNWEMRINKSHLVFVTFSDTSDQV 132
>UniRef50_Q661C7 Cluster: 50S ribosomal protein L6; n=9; cellular
organisms|Rep: 50S ribosomal protein L6 - Borrelia
garinii
Length = 180
Score = 51.2 bits (117), Expect = 2e-05
Identities = 29/77 (37%), Positives = 47/77 (61%)
Frame = +2
Query: 65 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 244
+KIPD + + VK LV V+G RG L ++ K ++++++ N ++ V + F KK A
Sbjct: 9 IKIPDTVKIDVKGNLVIVEGTRGKLVQDIKD-SINVKVENGSVI-VNRAFNDKKTKAYHG 66
Query: 245 TVCSHVENMIKGVTKGF 295
S + NM+KGVT+GF
Sbjct: 67 LYRSLIFNMVKGVTEGF 83
>UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7;
Bacilli|Rep: 50S ribosomal protein L6 - Bacillus
subtilis
Length = 179
Score = 51.2 bits (117), Expect = 2e-05
Identities = 43/157 (27%), Positives = 77/157 (49%), Gaps = 1/157 (0%)
Frame = +2
Query: 50 VANQKVKIPDGLTVHVK-SRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKK 226
V + ++IP +TV + + V VKGP+G L R F H ++I+ V +L V + K+
Sbjct: 4 VGKKLLEIPSDVTVTLNDNNTVAVKGPKGELTRTF-HPDMEIK-VEDNVLTVARPSDQKE 61
Query: 227 ELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRR 406
A T S + NM++GV+KGF+ + V + + GN ++ L Y
Sbjct: 62 HRALHGTTRSLLGNMVEGVSKGFERGLELVGVGYR---ASKSGNKLV-----LNVGYSHP 113
Query: 407 VKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQ 517
V++ P + + +++++G E V + AA I+
Sbjct: 114 VEIVPEEGIEIEVPSQTKVVVKGTDKERVGAIAANIR 150
>UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40;
Bacteria|Rep: 50S ribosomal protein L6 - Oceanobacillus
iheyensis
Length = 178
Score = 50.8 bits (116), Expect = 2e-05
Identities = 30/89 (33%), Positives = 49/89 (55%)
Frame = +2
Query: 50 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 229
V + V+IP+G+ + + + VTVKGP+G L R H + I + +L VE+ K+
Sbjct: 4 VGLKPVEIPEGVELKLDNNTVTVKGPKGELSREL-HPDMKIN-IEDNVLTVERPSDHKEH 61
Query: 230 LAAVRTVCSHVENMIKGVTKGFQYKMRAV 316
A T S + NM+ GV+KGF+ + +
Sbjct: 62 RALHGTTRSLINNMVIGVSKGFEKSLEII 90
>UniRef50_Q8R7W9 Cluster: 50S ribosomal protein L6; n=22;
Bacteria|Rep: 50S ribosomal protein L6 -
Thermoanaerobacter tengcongensis
Length = 180
Score = 49.6 bits (113), Expect = 5e-05
Identities = 42/153 (27%), Positives = 77/153 (50%), Gaps = 1/153 (0%)
Frame = +2
Query: 65 VKIPDGLTVHVK-SRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 241
+ IP G+ V V +VTVKG +G L++ F + V+I + + ++ K K+E A
Sbjct: 9 IPIPKGVEVKVSPDNVVTVKGAKGTLEKKFPPI-VNIEVRDGEVVVTRKG-DDKEERAMH 66
Query: 242 RTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAP 421
T + + NM+KGVT+GF+ + V + +G + I N +G + ++ P
Sbjct: 67 GTTRAIIANMVKGVTEGFEKALEIVGVGYR---AAKQGKKL--ILN-VGYSHPVEIEEEP 120
Query: 422 GVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQ 520
G+ ++ + + +I+ G E V AA I++
Sbjct: 121 GIEII--VEGNNRIIVRGADKERVGQVAANIRR 151
>UniRef50_Q847P4 Cluster: 50S ribosomal protein L6; n=1; Aster
yellows phytoplasma|Rep: 50S ribosomal protein L6 -
Aster yellows phytoplasma
Length = 175
Score = 48.0 bits (109), Expect = 1e-04
Identities = 37/157 (23%), Positives = 73/157 (46%), Gaps = 1/157 (0%)
Frame = +2
Query: 50 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV-NPRLLKVEKWFGSKK 226
+ N V IP+ + V + ++ +KGP G L + + DI ++ N + V++ KK
Sbjct: 12 IGNIPVLIPNNVFVKKQDNIIYIKGPLGKLNQE---IIGDINIIINHNNIIVKRKHNDKK 68
Query: 227 ELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRR 406
A + NMIKGV+ GF+ K+ + F N + N I+ + +G +
Sbjct: 69 NRALHGLYRMLIYNMIKGVSNGFKKKLELIGVGFRAN-INNNNNQILNLN--IGYSHNIM 125
Query: 407 VKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQ 517
+K+ +T+ + ++I++ + + AA I+
Sbjct: 126 IKLPQSITLEVKMDKNPQIILKSYDKQLLGIVAAKIR 162
>UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_132,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 167
Score = 46.4 bits (105), Expect = 4e-04
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 9/72 (12%)
Frame = +2
Query: 104 RLVTVKGPRGVLKRNFKHLAVDIRMVNP-------RLLKVE--KWFGSKKELAAVRTVCS 256
+L+ + GPRG+L RNFKH ++DI++ L+K+E K+ V+++ +
Sbjct: 53 KLIMIIGPRGILNRNFKHASLDIQVQKEIKEIKQIGLIKIEYQDVVQYSKQRFQVKSIAA 112
Query: 257 HVENMIKGVTKG 292
++NMI+G+T G
Sbjct: 113 QIKNMIRGITSG 124
>UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular
organisms|Rep: 50S ribosomal protein L6 - Thermotoga
maritima
Length = 184
Score = 46.4 bits (105), Expect = 4e-04
Identities = 26/94 (27%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Frame = +2
Query: 50 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNF-KHLAVDIR----MVNPRLLKVEKWF 214
+A + + +P G+TV +K +V VKGP+G L + F ++ +++ V P ++ +
Sbjct: 4 LAKKPIVLPQGVTVEIKDNVVKVKGPKGELSQEFLPYVKIEVEGNEVWVRPNEEQIIRKS 63
Query: 215 GSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAV 316
+K T S + NM+ GVT+G++ ++ V
Sbjct: 64 DWRKVKMFQGTYWSLIRNMVVGVTEGYKKELEIV 97
>UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain WH7803)
Length = 179
Score = 45.2 bits (102), Expect = 0.001
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = +2
Query: 50 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 229
+ + IPD ++V + VTVKGP+G LKR V + V+ ++ K++
Sbjct: 4 IGKSPIPIPDKVSVSLDGLAVTVKGPKGELKRTLPD-GVTVNQVDNTIVVAPT--SEKRQ 60
Query: 230 LAAVRTVC-SHVENMIKGVTKGFQYKMRAV 316
+C + V NMI+GV+KG+ K+ V
Sbjct: 61 SRERHGLCRTLVANMIEGVSKGYSKKLEIV 90
>UniRef50_Q2JIL3 Cluster: 50S ribosomal protein L6; n=44; cellular
organisms|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria
bacteriumYellowstone B-Prime)
Length = 181
Score = 43.2 bits (97), Expect = 0.004
Identities = 33/157 (21%), Positives = 78/157 (49%), Gaps = 1/157 (0%)
Frame = +2
Query: 50 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 229
+ + + +P + + + + + VKGP+G L R+ L + ++ N ++L V + +
Sbjct: 4 IGRRPIALPAKVEIQIDGQHIAVKGPKGQLSRSLPPL-ITVQQ-NAQMLTVSR-LNDSRP 60
Query: 230 LAAVRTVC-SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRR 406
+ +C + V NM+ GV+KGF+ ++ V + +G+ + + N +G +
Sbjct: 61 ARQLHGLCRTLVANMVDGVSKGFERRLELVGVGYR---AAIQGSKL--VLN-VGYSHPVE 114
Query: 407 VKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQ 517
+ PG+ + + + + +++ G E V ++AA I+
Sbjct: 115 IPFPPGIQI--AVEGNNIIVVSGTDKELVGNTAARIR 149
>UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16;
Firmicutes|Rep: 50S ribosomal protein L6 - Onion yellows
phytoplasma
Length = 184
Score = 43.2 bits (97), Expect = 0.004
Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Frame = +2
Query: 50 VANQKVKIPDGLTVHVKSR-LVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKK 226
V N+ +++P+ + V +K R ++V+GP+G L+ F H + + N + K +
Sbjct: 4 VGNKAIEVPNAVKVDIKDRNFISVEGPKGKLEYQFNHR---LTITNENKVITVKRPNDEI 60
Query: 227 ELAAVR-TVCSHVENMIKGVTKGFQYKMRAV 316
+ + T + + NM++GV+KGFQ ++ V
Sbjct: 61 FMKKIHGTTRALLSNMVEGVSKGFQKTLKIV 91
>UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34;
Bacteria|Rep: 50S ribosomal protein L6 - Bacteroides
thetaiotaomicron
Length = 189
Score = 43.2 bits (97), Expect = 0.004
Identities = 40/140 (28%), Positives = 75/140 (53%), Gaps = 5/140 (3%)
Frame = +2
Query: 65 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVE---KWFGSKKELA 235
+ IP G+TV +K +VTVKGP+G L + + + A+++ + + + E + + K+
Sbjct: 9 ISIPAGVTVTLKDDVVTVKGPKGELSQ-YVNPAINVAIEDGHVTLTENEKEMIDNPKQKH 67
Query: 236 AVRTVC-SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVK 412
A + S V NM+ GV++G++ ++ V + + +GN IIE+ LG + ++
Sbjct: 68 AFHGLYRSLVHNMVVGVSEGYKKELELVGVGYR---ASNQGN-IIELA--LGYTHNIFIQ 121
Query: 413 MAPGVTV-VNSPKQKDELII 469
+ V V S + K+ LII
Sbjct: 122 LPAEVKVETKSERNKNPLII 141
>UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain CC9311)
Length = 179
Score = 41.9 bits (94), Expect = 0.009
Identities = 36/157 (22%), Positives = 69/157 (43%), Gaps = 1/157 (0%)
Frame = +2
Query: 50 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 229
+ + IPD + V + VTVKGP+G LKR V + V+ ++ +K+
Sbjct: 4 IGKNPIPIPDKVNVTLSGLAVTVKGPKGELKRTLPS-GVSVNQVDNSIVVAPT--STKRS 60
Query: 230 LAAVRTVC-SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRR 406
+C + V NM+ GV++G+ K+ V + +G +++ + Y
Sbjct: 61 SRERHGLCRTLVANMVIGVSQGYSKKLEIVGVG---SRAQVKGKTLV-----VSAGYSHP 112
Query: 407 VKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQ 517
V++ P + + + + + G E V + AA I+
Sbjct: 113 VEVVPPEGITFTVENNTNVTVSGTDKELVGNEAAKIR 149
>UniRef50_A5LSZ6 Cluster: 50S ribosomal protein L6; n=1;
Streptococcus pneumoniae SP9-BS68|Rep: 50S ribosomal
protein L6 - Streptococcus pneumoniae SP9-BS68
Length = 139
Score = 41.5 bits (93), Expect = 0.012
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Frame = +2
Query: 50 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 229
+ N+ + +P G+ + +VTVKGP+G L R F ++IR V + + + SK+
Sbjct: 4 IGNKVIVLPAGVELANNDNVVTVKGPKGELTREFSK-DIEIR-VEGTEITLHRPNDSKEM 61
Query: 230 LAAVRTVCSHVENMIKGVTKGF--QYKMRAV 316
T + + NM+ GV++GF + +MR V
Sbjct: 62 KTIHGTTRALLNNMVVGVSEGFKKELEMRGV 92
>UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Dehalococcoides
sp. (strain CBDB1)
Length = 182
Score = 41.1 bits (92), Expect = 0.016
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 1/157 (0%)
Frame = +2
Query: 50 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 229
+ +K+P G+ V + VTVKGP+G L R+F+ V I L+ G+ K
Sbjct: 4 IGKMPIKVPPGIKVDINGNDVTVKGPKGTLSRSFRP-EVTINREGDYLVVAP--VGTDKA 60
Query: 230 LAAVRTVC-SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRR 406
+ + + ++NMI GV GF + V + +G+ ++ +
Sbjct: 61 TRSFFGLSRTLLDNMIVGVKDGFDKNLEIVGVGMRAD---KDGDKVV-----FKVGFSHS 112
Query: 407 VKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQ 517
V +AP + S ++ + G + EDV AA I+
Sbjct: 113 VTVAPPAGITLSVDGTTKVKVSGINKEDVGQMAAEIR 149
>UniRef50_Q6KI40 Cluster: 50S ribosomal protein l6; n=4;
Mycoplasma|Rep: 50S ribosomal protein l6 - Mycoplasma
mobile
Length = 179
Score = 40.3 bits (90), Expect = 0.029
Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 1/161 (0%)
Frame = +2
Query: 50 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHL-AVDIRMVNPRLLKVEKWFGSKK 226
V + + +P + +++K+ LV +KG GVL N L A+++ + ++ + K
Sbjct: 4 VGRRVLTLPKDVELNIKNNLVEIKGKLGVLTFNVNPLIAIEVENHEVKTIRANE---EKH 60
Query: 227 ELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRR 406
T S +ENMI GV+KGF+ ++ + + S IEI G ++
Sbjct: 61 TKQLHGTTNSIIENMIIGVSKGFKKELEIK----GVGYKSALKGSQIEIA--AGYSHLVY 114
Query: 407 VKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTT 529
V + P V PK ++II G + V AA+I++ T
Sbjct: 115 VNV-PKELKVEIPK-PTQIIISGIDNQKVGELAAVIRKVRT 153
>UniRef50_Q9ZCS0 Cluster: 50S ribosomal protein L6; n=10;
Rickettsieae|Rep: 50S ribosomal protein L6 - Rickettsia
prowazekii
Length = 177
Score = 40.3 bits (90), Expect = 0.029
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = +2
Query: 50 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFK-HLAVDIRMVNPRLLKVEKWFGSKK 226
V + IP+G+ V + V + GP+G L + FK ++A+ ++ L V+ +K
Sbjct: 4 VGKLPITIPEGVKVGLNDLEVKISGPKGELSKTFKGNIAI---IMEENKLVVKPLAVNKN 60
Query: 227 ELAAVRTVCSHVENMIKGVTKGFQYKM 307
A T S + NMI GV +GF+ K+
Sbjct: 61 ARAMWGTARSIICNMITGVKEGFKLKL 87
>UniRef50_Q9RSL3 Cluster: 50S ribosomal protein L6; n=65; cellular
organisms|Rep: 50S ribosomal protein L6 - Deinococcus
radiodurans
Length = 185
Score = 39.9 bits (89), Expect = 0.038
Identities = 24/82 (29%), Positives = 44/82 (53%)
Frame = +2
Query: 50 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 229
+ Q + +P G+TV+ + + VKGP+G L + + + +R +LL VE+ ++K
Sbjct: 4 IGKQPIAVPSGVTVNAQDGVFKVKGPKGELTVPY-NTELTVRQDGDQLL-VERPSDAQKH 61
Query: 230 LAAVRTVCSHVENMIKGVTKGF 295
A + V N +KGV+ G+
Sbjct: 62 RALHGLTRTLVANAVKGVSDGY 83
>UniRef50_O23049 Cluster: 50S ribosomal protein L6, chloroplast
precursor; n=8; Magnoliophyta|Rep: 50S ribosomal protein
L6, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 223
Score = 39.9 bits (89), Expect = 0.038
Identities = 31/157 (19%), Positives = 70/157 (44%)
Frame = +2
Query: 50 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 229
+ Q + +P +T+ ++ + + VKGP G L + V++ L+V+K +++
Sbjct: 46 IGKQPIAVPSNVTIALEGQDLKVKGPLGELALTYPR-EVELTKEESGFLRVKKTVETRRA 104
Query: 230 LAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRV 409
+ +NM+ GV+KGF+ K+ V + T +G ++ L + V
Sbjct: 105 NQMHGLFRTLTDNMVVGVSKGFEKKLILVGVGYR---ATVDGKELV-----LNLGFSHPV 156
Query: 410 KMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQ 520
KM ++ ++ + + G ++ AA +++
Sbjct: 157 KMQIPDSLKVKVEENTRITVSGYDKSEIGQFAATVRK 193
>UniRef50_Q7VQD3 Cluster: 50S ribosomal subunit protein L6; n=2;
Candidatus Blochmannia|Rep: 50S ribosomal subunit
protein L6 - Blochmannia floridanus
Length = 181
Score = 39.5 bits (88), Expect = 0.050
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Frame = +2
Query: 38 MKQIVANQKVK-IPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWF 214
M+QI + + IP+ + + ++ + V G G L F H + ++ N + L V +
Sbjct: 1 MEQISGYKSIICIPNEIQITIQDCCILVVGVLGNLSYKF-HNFIGVQFSNVKNLIVYSRY 59
Query: 215 GSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAV 316
+ A + T CS + +MI GVT+GF K++ +
Sbjct: 60 RNHVNRALLGTTCSLINSMIVGVTEGFVKKLQLI 93
>UniRef50_A0YJS9 Cluster: 50S ribosomal protein L6; n=2; cellular
organisms|Rep: 50S ribosomal protein L6 - Lyngbya sp.
PCC 8106
Length = 181
Score = 39.5 bits (88), Expect = 0.050
Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 1/157 (0%)
Frame = +2
Query: 50 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 229
+ + + IP +T ++ + + VKGP+G L R + + + L+K ++
Sbjct: 4 IGKRPIPIPPKVTFTIEGQHIIVKGPKGELSRVLPEKVILEQDGDTLLVKRRDESRVARQ 63
Query: 230 LAAV-RTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRR 406
L + RT+ V NM+ GV+KGF+ ++ + +G ++I L Y +
Sbjct: 64 LHGLSRTL---VANMVDGVSKGFEKRLEIQGVGYR---AQVQGKNLI-----LNVGYSKP 112
Query: 407 VKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQ 517
V+M P + + + +II G E V + AA I+
Sbjct: 113 VEMNPPQGITVAVENNTNVIISGIDKEVVGNIAAQIR 149
>UniRef50_Q7UN05 Cluster: 50S ribosomal protein L6; n=3;
Planctomycetaceae|Rep: 50S ribosomal protein L6 -
Rhodopirellula baltica
Length = 181
Score = 39.5 bits (88), Expect = 0.050
Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 5/161 (3%)
Frame = +2
Query: 50 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKH-----LAVDIRMVNPRLLKVEKWF 214
+ N+ V IP G+TV + R + V+GP+G K +FKH +AVD N ++ +
Sbjct: 4 IGNKPVAIPSGVTVSIADRNIDVEGPKG--KLSFKHRPEVKVAVD-SDTNQVIVSRDGDD 60
Query: 215 GSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 394
+E + V NM+ GV G++ K+ V + + + +++R +
Sbjct: 61 RPSREFHGLTRAI--VANMLVGVKDGYEKKLEIV----GVGYLASISGDTLQLRVGYANE 114
Query: 395 YIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQ 517
R++ P V P Q ++I+G + V AA I+
Sbjct: 115 LHRKI---PTDLTVTCPDQ-THVVIQGCDKQSVGQFAAEIR 151
>UniRef50_Q9A8T8 Cluster: 50S ribosomal protein L6; n=16;
Bacteria|Rep: 50S ribosomal protein L6 - Caulobacter
crescentus (Caulobacter vibrioides)
Length = 177
Score = 39.5 bits (88), Expect = 0.050
Identities = 26/89 (29%), Positives = 42/89 (47%)
Frame = +2
Query: 50 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 229
+ + V IP G+ V + + VTVKGP+G L V+++ LL + +K+
Sbjct: 4 IGKKAVAIPSGVQVTLAGQTVTVKGPKGQLSWTIAD-EVEVKQEGAELLLAPR-VDTKRA 61
Query: 230 LAAVRTVCSHVENMIKGVTKGFQYKMRAV 316
+ V NM+ GVT GF+ + V
Sbjct: 62 KGMWGLSRTLVANMVHGVTVGFEESLELV 90
>UniRef50_Q8KAI6 Cluster: 50S ribosomal protein L6; n=15;
Bacteria|Rep: 50S ribosomal protein L6 - Chlorobium
tepidum
Length = 179
Score = 39.1 bits (87), Expect = 0.066
Identities = 25/86 (29%), Positives = 40/86 (46%)
Frame = +2
Query: 50 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 229
+ +++ D V VK ++ V GP+G L + I V + V++ SK+
Sbjct: 4 IGKMPIRLADQAQVEVKENMINVTGPKGALSQALVDEV--IVSVADGAVTVQRKDDSKRA 61
Query: 230 LAAVRTVCSHVENMIKGVTKGFQYKM 307
A V NM++GVTKGF K+
Sbjct: 62 RAMHGLYRMLVSNMVEGVTKGFTRKL 87
>UniRef50_Q98PZ7 Cluster: 50S ribosomal protein L6; n=29;
Bacteria|Rep: 50S ribosomal protein L6 - Mycoplasma
pulmonis
Length = 179
Score = 38.7 bits (86), Expect = 0.088
Identities = 26/87 (29%), Positives = 44/87 (50%)
Frame = +2
Query: 50 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 229
V + ++IP G V + VKG G L R F V+I+ N + + VE+ K
Sbjct: 4 VGKRIIQIPSGTEVKIDGSFFEVKGKLGSLSRLFSPF-VNIKHENNQ-ISVERLNELKPT 61
Query: 230 LAAVRTVCSHVENMIKGVTKGFQYKMR 310
T + + NM+KGV++GF+ +++
Sbjct: 62 KQLHGTTNALIANMVKGVSEGFKKELK 88
>UniRef50_Q9ZI38 Cluster: 50S ribosomal protein L6; n=2; Aquifex
pyrophilus|Rep: 50S ribosomal protein L6 - Aquifex
pyrophilus
Length = 187
Score = 38.3 bits (85), Expect = 0.12
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +2
Query: 98 KSRLVTVKGPRGVLKRNFKHLAVDIRM-VNPRLLKVEKWFGSKKELAAVRTVCSHVENMI 274
K VTV+GP+G L+ N H + + + R +K+++ A T+ + ++NMI
Sbjct: 22 KEHKVTVEGPKGKLELNI-HPDIKVTLNQQERWIKLDRPSDRSFHKAIHGTMAALIKNMI 80
Query: 275 KGVTKGF 295
KGVT+GF
Sbjct: 81 KGVTEGF 87
>UniRef50_O67565 Cluster: 50S ribosomal protein L6; n=1; Aquifex
aeolicus|Rep: 50S ribosomal protein L6 - Aquifex
aeolicus
Length = 183
Score = 37.9 bits (84), Expect = 0.15
Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Frame = +2
Query: 50 VANQKVKIPDGLTVHV--KSRLVTVKGPRGVLKRNFKHLAVDIRM-VNPRLLKVEKWFGS 220
+A + + P+ + V+ K + V+GP+G L+ N H + + + R +K+++
Sbjct: 4 LAKKPIPYPENVKVNYVEKEHKIVVEGPKGKLELNV-HPDIKVTVNQQERWIKLDRPTDR 62
Query: 221 KKELAAVRTVCSHVENMIKGVTKGF 295
A T+ + V+NMIKGVT+GF
Sbjct: 63 SFHKAIHGTMAALVKNMIKGVTEGF 87
>UniRef50_UPI0000499CA8 Cluster: BspA-like leucine rich repeat
protein; n=1; Entamoeba histolytica HM-1:IMSS|Rep:
BspA-like leucine rich repeat protein - Entamoeba
histolytica HM-1:IMSS
Length = 651
Score = 37.5 bits (83), Expect = 0.20
Identities = 22/46 (47%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +2
Query: 2 AFSGSCVKQSPNMKQIVANQKVK-IPDGLTVHVKSRLVTVKGPRGV 136
+FS C KQ N+K I K+K IPDG S L+TVK P+GV
Sbjct: 590 SFSTDCFKQCTNLKSIAIPLKLKEIPDGCFAGCSS-LITVKIPKGV 634
>UniRef50_Q6E783 Cluster: Ribosomal protein L6; n=5; Oomycetes|Rep:
Ribosomal protein L6 - Saprolegnia ferax
Length = 204
Score = 36.7 bits (81), Expect = 0.35
Identities = 30/141 (21%), Positives = 61/141 (43%)
Frame = +2
Query: 56 NQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELA 235
++K++IP + + +K + ++GP G + N H N LL +K+ +
Sbjct: 30 HEKIRIPKNINIVLKKNQLILQGPLGSIDLNIMHSLNYFIKNNNILLSFNSLHLKRKKKS 89
Query: 236 AVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKM 415
+ S ++ IKG+ +GF K+ E N I++ LG + +++
Sbjct: 90 FLNLYKSLIKLKIKGILQGF--KLNLFLKGLGFKAFIEEKNLILK----LGYSHSITIEI 143
Query: 416 APGVTVVNSPKQKDELIIEGN 478
+ ++N Q ++LI N
Sbjct: 144 PENIKIIN---QTNKLIFSSN 161
>UniRef50_Q8DML8 Cluster: 50S ribosomal protein L6; n=4; cellular
organisms|Rep: 50S ribosomal protein L6 - Synechococcus
elongatus (Thermosynechococcus elongatus)
Length = 187
Score = 36.7 bits (81), Expect = 0.35
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +2
Query: 50 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 229
+ + + +P +T+ + + VTVKGP+G L R F ++ +V V K +
Sbjct: 4 IGKRPIPLPKNVTLTLDGQQVTVKGPKGQLSRVF---PPEVNVVQEGEAIVVKRRDDSRP 60
Query: 230 LAAVRTVC-SHVENMIKGVTKGFQYKM 307
+C + + NM++GV++GF K+
Sbjct: 61 AKERHGLCRTLLANMVEGVSQGFTKKL 87
>UniRef50_Q6Q8X3 Cluster: 50S ribosomal protein L6; n=6;
Proteobacteria|Rep: 50S ribosomal protein L6 -
uncultured marine gamma proteobacterium EBAC20E09
Length = 182
Score = 36.3 bits (80), Expect = 0.47
Identities = 33/157 (21%), Positives = 78/157 (49%), Gaps = 1/157 (0%)
Frame = +2
Query: 50 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKH-LAVDIRMVNPRLLKVEKWFGSKK 226
VA + IP+ + + + +V VKG +G L +++D V +++ ++ +++
Sbjct: 4 VAKNPITIPENVDLSINENVVIVKGSKGELDFVLPDTISLD---VADKVITIKYDEENQQ 60
Query: 227 ELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRR 406
+A T S + NM+ GV++GF+ K+ + + ++E+ LG + +
Sbjct: 61 SVALAGTSRSLINNMVIGVSEGFEKKLELIGVGYRAKA----SGKLLELT--LGFSHPVK 114
Query: 407 VKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQ 517
++ P V +P Q E++++ ++ + + +AA I+
Sbjct: 115 YQL-PDEVEVETPSQ-TEVVLKSHNKQILGQAAAEIR 149
>UniRef50_Q5FM76 Cluster: 50S ribosomal protein L6; n=10;
Firmicutes|Rep: 50S ribosomal protein L6 - Lactobacillus
acidophilus
Length = 176
Score = 36.3 bits (80), Expect = 0.47
Identities = 37/151 (24%), Positives = 67/151 (44%)
Frame = +2
Query: 65 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 244
+++PD +TV + +TVKGP+G L R F + N + + S+ + A
Sbjct: 9 IEVPDSVTVTKEGDNITVKGPKGELTRYFDPKITFEQ--NDGEINFSR--SSESDKALHG 64
Query: 245 TVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPG 424
T +++ +MI+GV G++ ++ + + +GN I L Y V +
Sbjct: 65 TERANLASMIEGVLNGYKKTLKLIGVGYR---AQAQGNKIT-----LNVGYSHPVVLTAP 116
Query: 425 VTVVNSPKQKDELIIEGNSLEDVSSSAALIQ 517
V ++ +EG S +DV AA I+
Sbjct: 117 EGVSVKATSATDVEVEGVSKQDVGQFAAEIR 147
>UniRef50_Q1XDI8 Cluster: Chloroplast 50S ribosomal protein L6; n=4;
cellular organisms|Rep: Chloroplast 50S ribosomal
protein L6 - Porphyra yezoensis
Length = 180
Score = 35.9 bits (79), Expect = 0.62
Identities = 21/88 (23%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = +2
Query: 50 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 229
+ + + +P L+ + +TV GP+G L R +++ ++N + K G K
Sbjct: 4 IGKKIILLPTNLSTQFDGQTITVTGPKGTLSRTLP-AGINLEILNDTI--AVKTSGQTKM 60
Query: 230 LAAVRTVC-SHVENMIKGVTKGFQYKMR 310
+ + + + + NMI+GV+ GF K++
Sbjct: 61 ASQLHGLSRTLISNMIEGVSNGFFKKLQ 88
>UniRef50_Q1ZBZ7 Cluster: 50S ribosomal protein L6; n=1;
Psychromonas sp. CNPT3|Rep: 50S ribosomal protein L6 -
Psychromonas sp. CNPT3
Length = 128
Score = 34.7 bits (76), Expect = 1.4
Identities = 24/83 (28%), Positives = 42/83 (50%)
Frame = +2
Query: 50 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 229
+A + + G+ V V + +T+KG +G L R AV +++ + ++ G K
Sbjct: 4 IAKAPITVLAGVEVKVNGQEITLKGGKGELVRTLND-AVVVKLEDG-VITFAPVEGIKDA 61
Query: 230 LAAVRTVCSHVENMIKGVTKGFQ 298
A T ++V NM+ GVT GF+
Sbjct: 62 WAQAGTARANVNNMMIGVTTGFK 84
>UniRef50_Q11HR7 Cluster: 50S ribosomal protein L6; n=73;
Proteobacteria|Rep: 50S ribosomal protein L6 -
Mesorhizobium sp. (strain BNC1)
Length = 177
Score = 34.7 bits (76), Expect = 1.4
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +2
Query: 50 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLK 142
+ + V +P G+T +V ++VT KGP+G LK
Sbjct: 4 IGKKPVPVPQGVTANVDGQVVTAKGPKGELK 34
>UniRef50_Q4G353 Cluster: Chloroplast 50S ribosomal protein L6; n=2;
Eukaryota|Rep: Chloroplast 50S ribosomal protein L6 -
Emiliania huxleyi
Length = 181
Score = 34.7 bits (76), Expect = 1.4
Identities = 40/159 (25%), Positives = 65/159 (40%), Gaps = 3/159 (1%)
Frame = +2
Query: 50 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKR---NFKHLAVDIRMVNPRLLKVEKWFGS 220
+ Q + IPD + + ++ + V V GP+G L R +F +D L K E+ S
Sbjct: 4 IGKQYISIPDKVNIRLEGQKVFVDGPKGKLTRILPSFICCTIDEPEKKVFLEKAEENKLS 63
Query: 221 KKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYI 400
+ RT+ S NM+ GV+ G+ K+ + +G +I L Y
Sbjct: 64 QALYGLSRTLLS---NMVTGVSSGWHKKLTIAGVGYR---AQLDGKDLI-----LNMGYS 112
Query: 401 RRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQ 517
VKM + S + + + G E V AA I+
Sbjct: 113 HPVKMVTPPALSVSVESPTSITVSGLEKEAVGEFAAKIR 151
>UniRef50_Q4QI55 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 946
Score = 34.3 bits (75), Expect = 1.9
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = -3
Query: 276 LIMFSTCEQTVLTAASSFLDPNHFSTFRRRGFTMRMSTA--KCLKFLLRTPRGPLTVTRR 103
L +F+ C ++V+ A+S L P+H + R GF + TA + FL R PL + R
Sbjct: 22 LELFAACRESVVHVAASHLLPDHVAVTTRNGFVELIDTATGEFRLFLTYLDRIPLDASLR 81
Query: 102 DFT 94
F+
Sbjct: 82 CFS 84
>UniRef50_Q5PA73 Cluster: 50S ribosomal protein L6; n=6;
Anaplasmataceae|Rep: 50S ribosomal protein L6 -
Anaplasma marginale (strain St. Maries)
Length = 181
Score = 33.9 bits (74), Expect = 2.5
Identities = 42/156 (26%), Positives = 69/156 (44%), Gaps = 3/156 (1%)
Frame = +2
Query: 50 VANQKVKIPDGLTVHV-KSRLVTVKGPRGVLKRNFKHLAVDIRMV--NPRLLKVEKWFGS 220
V +++P+G+ V V VTV G G +F L IR V LL V + S
Sbjct: 4 VGAMPIEVPEGVKVDVCDGNSVTVIGKDGT-SSSFS-LCHGIRAVLDGSTLLLVNERQSS 61
Query: 221 KKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYI 400
+ + S + N IKG++KGF ++ + + C GN + + F+G +
Sbjct: 62 PRAKVMWGSYRSGISNAIKGLSKGFSVELEVNGVGYRVVC----GNKYLSM--FVGFSHG 115
Query: 401 RRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAA 508
R + G+ + PK +L+I+G+ V AA
Sbjct: 116 VRYVIPEGIE-IKCPK-PTQLVIKGSDKVKVHMVAA 149
>UniRef50_O21255 Cluster: Mitochondrial 60S ribosomal protein L6;
n=1; Reclinomonas americana|Rep: Mitochondrial 60S
ribosomal protein L6 - Reclinomonas americana
Length = 185
Score = 33.9 bits (74), Expect = 2.5
Identities = 22/95 (23%), Positives = 51/95 (53%), Gaps = 6/95 (6%)
Frame = +2
Query: 50 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV-NPRLLKVEKW-FGSK 223
+ ++++KIP +++ + + V+G G L+ ++ + ++ + N + L ++ G+K
Sbjct: 4 IGSKQIKIPKNVSIDLSMNKIYVRGDLGKLELPLNNINIHLKNIENDQFLILDPINTGTK 63
Query: 224 KELAAV----RTVCSHVENMIKGVTKGFQYKMRAV 316
K+ A T + +ENM+ GV+KG+ + V
Sbjct: 64 KQKTASYIMWGTYRTLIENMLIGVSKGYSKTIELV 98
>UniRef50_Q7NEG7 Cluster: 50S ribosomal protein L6; n=19;
Bacteria|Rep: 50S ribosomal protein L6 - Gloeobacter
violaceus
Length = 191
Score = 33.9 bits (74), Expect = 2.5
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Frame = +2
Query: 65 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG--SKKELAA 238
+ IP + V + R V VKGP+G L +V++ + RLL + ++++
Sbjct: 9 IAIPPKVEVTLDGRRVVVKGPKGTLDLTLPD-SVEVVREDGRLLVTRRGESRRAREQHGL 67
Query: 239 VRTVCSHVENMIKGVTKGFQYKMR 310
RT+ V NM+ GVT GF M+
Sbjct: 68 GRTL---VANMVTGVTTGFTKPMQ 88
>UniRef50_A6DRC5 Cluster: 50S ribosomal protein L6; n=1;
Lentisphaera araneosa HTCC2155|Rep: 50S ribosomal
protein L6 - Lentisphaera araneosa HTCC2155
Length = 181
Score = 33.5 bits (73), Expect = 3.3
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Frame = +2
Query: 50 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFK---HLAVDIRMVNPRLLKVEKWFGS 220
+ N+ + I G+ V + + V+VKGP+G LK +VD + + + S
Sbjct: 4 IGNKAISITAGVEVKISGKEVSVKGPKGELKHTLTPRVEASVDADSNEVVVTRQDDSRFS 63
Query: 221 KKELAAVRTVCSHVENMIKGVTKGFQYKM 307
K E R++ + NMI GV+ G++ ++
Sbjct: 64 KAEHGLNRSL---ISNMIVGVSTGWKKEL 89
>UniRef50_Q1MPQ0 Cluster: 50S ribosomal protein L6; n=1; Lawsonia
intracellularis PHE/MN1-00|Rep: 50S ribosomal protein L6
- Lawsonia intracellularis (strain PHE/MN1-00)
Length = 181
Score = 33.5 bits (73), Expect = 3.3
Identities = 35/152 (23%), Positives = 70/152 (46%)
Frame = +2
Query: 65 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 244
+ IP G+ + + +++KGP+ L L + +L F +++ LA
Sbjct: 9 IMIPAGVEITFGEKNISIKGPKATLVTPKCELLSYEHKEDKIILTCN--FDTRESLAQYG 66
Query: 245 TVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPG 424
+ + N I+GVTKGF + + + V+ +GN I+E+ +G + +++ G
Sbjct: 67 LRRTLLANCIEGVTKGFSKTLEVIGVGYR---VSVKGN-IVELS--VGYSHPVHIELPDG 120
Query: 425 VTVVNSPKQKDELIIEGNSLEDVSSSAALIQQ 520
+T + + +L I G+ V AA I++
Sbjct: 121 IT---AKAEGQKLTIMGSDKVLVGEMAARIRR 149
>UniRef50_P47412 Cluster: 50S ribosomal protein L6; n=6;
Mycoplasmataceae|Rep: 50S ribosomal protein L6 -
Mycoplasma genitalium
Length = 184
Score = 33.1 bits (72), Expect = 4.4
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Frame = +2
Query: 50 VANQKVKI-PDGLTVHVKSRLVTVKGPRGVLKRNF-KHLAVDIRMVNPRLLKVEKWFGSK 223
+ N+ +KI P +++ + L+T+KGP G K+L + + N + KV K
Sbjct: 4 IGNRSIKIDPSKVSLMQTTTLLTIKGPLGENTIKLPKNLPLKFVVENDTI-KVTNNNNLK 62
Query: 224 KELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPIN 337
+ T + V N + GVTKGF+ K+ V + N
Sbjct: 63 QTKILHGTFNALVNNAVIGVTKGFEKKLILVGVGYRAN 100
>UniRef50_Q74L75 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Lactobacillus
johnsonii
Length = 176
Score = 33.1 bits (72), Expect = 4.4
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +2
Query: 65 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV-NPRLLKVEKWFGSKKELAAV 241
+++P+ +TV +TVKGP+G L R F D R+ + ++ S+ + A
Sbjct: 9 IEVPEKVTVTKNGDDITVKGPKGELTRYF-----DPRITFEQKDGEIHFSRSSEADKALH 63
Query: 242 RTVCSHVENMIKGVTKGFQYKMRAV 316
T +++ +MI+GVT G+ K+ V
Sbjct: 64 GTERANLASMIEGVTDGYVKKLTLV 88
>UniRef50_Q2IJ73 Cluster: 50S ribosomal protein L6; n=6;
Bacteria|Rep: 50S ribosomal protein L6 -
Anaeromyxobacter dehalogenans (strain 2CP-C)
Length = 180
Score = 33.1 bits (72), Expect = 4.4
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +2
Query: 50 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHL-AVDIRMVNPRLLKVEKWFGSKK 226
V VKIP+ + V V +V V+GP+G + L +V + ++ + ++ +K
Sbjct: 4 VGKMPVKIPEKVKVSVDGNVVKVEGPKGKMHFPTNPLVSVQVDKGEVKVARQDESHVAKG 63
Query: 227 ELAAVRTVCSHVENMIKGVTKGFQ 298
RT+ V+N ++GV KG++
Sbjct: 64 LHGLTRTL---VKNALEGVVKGYE 84
>UniRef50_UPI000049A156 Cluster: ankyrin; n=9; Entamoeba histolytica
HM-1:IMSS|Rep: ankyrin - Entamoeba histolytica HM-1:IMSS
Length = 866
Score = 32.7 bits (71), Expect = 5.8
Identities = 20/75 (26%), Positives = 35/75 (46%)
Frame = +2
Query: 146 NFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAH 325
+F LAVD ++N +L+K + ++K + T+ HV +K + G Y Y
Sbjct: 683 DFPELAVDDEILNKKLIKYNNEWNAQKRMEIFSTIVGHVGEHVKMI--GPFYCNFGRYIS 740
Query: 326 FPINCVTTEGNSIIE 370
NC+ +I+E
Sbjct: 741 IGDNCIINFNCTILE 755
>UniRef50_Q8TMD2 Cluster: Putative uncharacterized protein; n=3;
Euryarchaeota|Rep: Putative uncharacterized protein -
Methanosarcina acetivorans
Length = 255
Score = 32.7 bits (71), Expect = 5.8
Identities = 21/61 (34%), Positives = 31/61 (50%)
Frame = +2
Query: 356 NSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVX 535
+SI + NF +K+ R V + PGV V +S + KDE G DV + +Q T+
Sbjct: 51 SSIGQAENFSRKKFFRGVVLPPGVPVTSSGRIKDETGFPG----DVVIKDGIWKQGKTIF 106
Query: 536 N 538
N
Sbjct: 107 N 107
>UniRef50_Q1RK02 Cluster: Ankyrin repeat; n=2; Rickettsia
bellii|Rep: Ankyrin repeat - Rickettsia bellii (strain
RML369-C)
Length = 629
Score = 32.3 bits (70), Expect = 7.6
Identities = 17/90 (18%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = +2
Query: 167 DIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPI-NCV 343
D R L+K + KK++ A + CS ++N + + + K+R + +PI
Sbjct: 508 DRRKAVESLVKYDNDLNKKKDITATLSYCSAIDNSFRAIDRNNLSKLRVLLDVYPILQEK 567
Query: 344 TTEGNSIIEIRNFLGEKYIRRVKMAPGVTV 433
+G++++ + Y+ + + G+ +
Sbjct: 568 NNKGDTLLTAAVYKDNYYLAKYLVIRGIKI 597
>UniRef50_Q4UCX9 Cluster: Glutamate-cysteine ligase, putative; n=1;
Theileria annulata|Rep: Glutamate-cysteine ligase,
putative - Theileria annulata
Length = 795
Score = 32.3 bits (70), Expect = 7.6
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 428 TVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXNKDI 547
TVV P + ++ G+S+ED + + +++TT KDI
Sbjct: 76 TVVTGPTTTNSTVVPGSSMEDSTVPNTVTEENTTTTTKDI 115
>UniRef50_Q2S3P9 Cluster: 50S ribosomal protein L6; n=1;
Salinibacter ruber DSM 13855|Rep: 50S ribosomal protein
L6 - Salinibacter ruber (strain DSM 13855)
Length = 184
Score = 32.3 bits (70), Expect = 7.6
Identities = 35/158 (22%), Positives = 68/158 (43%), Gaps = 2/158 (1%)
Frame = +2
Query: 50 VANQKVKIPDGLTVHVKSR-LVTVKGPRGVLKRNFK-HLAVDIRMVNPRLLKVEKWFGSK 223
+ + + D +TV V +VT++GP+G L + +DI + + V + K
Sbjct: 4 IGDNPIPFGDEVTVSVDDHNVVTIEGPKGTLTEQIDPEMTLDIADDH---VVVRRPTNQK 60
Query: 224 KELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIR 403
+ + S + NM++GVT+G++ +++ + + + +EI
Sbjct: 61 RHRSLHGLSRSLIVNMVEGVTEGYKKELKIIGVGYRAQM----SDETLEIALGYSHPIYF 116
Query: 404 RVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQ 517
V+V + Q D +I+EG E V AA I+
Sbjct: 117 LPPSDVAVSVDSDRGQDDIIIVEGIDKELVGQVAAKIR 154
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 554,071,301
Number of Sequences: 1657284
Number of extensions: 11240808
Number of successful extensions: 28579
Number of sequences better than 10.0: 90
Number of HSP's better than 10.0 without gapping: 27781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28515
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35822246242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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