Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_G13
         (548 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    25   1.6  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           25   2.2  
AY176051-1|AAO19582.1|  522|Anopheles gambiae cytochrome P450 CY...    24   2.9  
AY146732-1|AAO12092.1|  327|Anopheles gambiae odorant-binding pr...    23   8.8  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    23   8.8  

>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 19/98 (19%), Positives = 40/98 (40%)
 Frame = +2

Query: 221  KKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYI 400
            + EL    T    +  M++ + K     +  +  H  +  V  +  +I++IRN+LG+  +
Sbjct: 947  RDELIRYSTALRDLTQMMRDIRKSRFSHLHKLTTHMALR-VKHKFTNIMQIRNYLGKLRV 1005

Query: 401  RRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALI 514
             + +    ++VV         +    SL     S A +
Sbjct: 1006 NQEECRLSLSVVPRDANVQNAVSTTKSLSGGERSYATV 1043


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 270 MFSTCEQTVLTAASSFLDPN 211
           M S CE+T+    SSF DP+
Sbjct: 327 MISACEKTMQRMTSSFPDPH 346


>AY176051-1|AAO19582.1|  522|Anopheles gambiae cytochrome P450
           CYP12F1 protein.
          Length = 522

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 16/59 (27%), Positives = 27/59 (45%)
 Frame = -3

Query: 501 ELETSSKELPSMINSSFCLGELTTVTPGAIFTLLMYFSPKKLRISIIELPSVVTQLMGK 325
           E  T +K + S++   F L       P   + L  YF    L++ + EL ++   +MGK
Sbjct: 226 EQTTGAKAIISLVQKIFDLMYRLEFEPE--YVLWKYFQTPSLKLLMQELDNLTNLVMGK 282


>AY146732-1|AAO12092.1|  327|Anopheles gambiae odorant-binding
           protein AgamOBP44 protein.
          Length = 327

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -3

Query: 288 LVTPLIMFSTCEQTVLTAASSFLDPNHFST 199
           LVTP ++ + C+   L    SFL   H  T
Sbjct: 12  LVTPNLIVAECDTKGLIVEKSFLQSVHDCT 41


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -3

Query: 273 IMFSTCEQTVLTAASSFLDPN 211
           IM +TC++T+    +S  DP+
Sbjct: 263 IMLATCDKTMQRVTTSHSDPH 283


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 579,845
Number of Sequences: 2352
Number of extensions: 12348
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)