Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_G08
(510 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q1HR63 Cluster: 60S ribosomal protein L13a; n=2; Aedes ... 165 7e-40
UniRef50_Q9VNE9 Cluster: 60S ribosomal protein L13A; n=127; Euka... 151 9e-36
UniRef50_P93099 Cluster: 60S ribosomal protein L13a; n=4; Eukary... 140 1e-32
UniRef50_Q6RH10 Cluster: 60S ribosomal protein L13a; n=5; Magnol... 133 3e-30
UniRef50_Q75J15 Cluster: Putative ribosomal protein L13a; n=1; O... 114 1e-24
UniRef50_Q7R0D6 Cluster: GLP_608_8346_8939; n=1; Giardia lamblia... 108 6e-23
UniRef50_Q245E7 Cluster: Ribosomal protein L13 containing protei... 102 4e-21
UniRef50_A4S5V9 Cluster: Ribosomal protein L13a, component of cy... 102 5e-21
UniRef50_Q4Q3B9 Cluster: 60S ribosomal protein L13a, putative; n... 94 1e-18
UniRef50_Q98RZ9 Cluster: 60s ribosomal protein L13A; n=1; Guilla... 90 2e-17
UniRef50_UPI0000EB39CE Cluster: UPI0000EB39CE related cluster; n... 68 7e-17
UniRef50_A2DZ26 Cluster: Ribosomal protein L13, putative; n=7; T... 83 3e-15
UniRef50_Q8SS16 Cluster: 60S RIBOSOMAL PROTEIN L13A; n=1; Enceph... 82 8e-15
UniRef50_Q4GXI8 Cluster: Ribomsomal protein L13Ae; n=2; Neoptera... 62 7e-09
UniRef50_O59300 Cluster: 50S ribosomal protein L13P; n=45; root|... 62 7e-09
UniRef50_Q8TVB6 Cluster: 50S ribosomal protein L13P; n=1; Methan... 59 7e-08
UniRef50_A7DRR6 Cluster: Ribosomal protein L13; n=1; Candidatus ... 55 8e-07
UniRef50_A0RXP5 Cluster: Ribosomal protein L13; n=1; Cenarchaeum... 55 8e-07
UniRef50_Q8PW45 Cluster: 50S ribosomal protein L13P; n=11; Eurya... 54 2e-06
UniRef50_O29137 Cluster: 50S ribosomal protein L13P; n=1; Archae... 50 3e-05
UniRef50_Q74ND7 Cluster: 50S ribosomal protein L13P; n=1; Nanoar... 49 7e-05
UniRef50_A7D2Q7 Cluster: Ribosomal protein L13; n=1; Halorubrum ... 48 9e-05
UniRef50_UPI0000EBD60B Cluster: PREDICTED: similar to ribosomal ... 48 1e-04
UniRef50_Q53K43 Cluster: Retrotransposon protein, putative, uncl... 48 1e-04
UniRef50_P29198 Cluster: 50S ribosomal protein L13P; n=4; Haloba... 47 2e-04
UniRef50_O18718 Cluster: Ribosomal protein L13A; n=4; Entamoeba|... 47 3e-04
UniRef50_Q8ZYQ1 Cluster: 50S ribosomal protein L13P; n=5; Thermo... 46 4e-04
UniRef50_Q2Q0G5 Cluster: Ribosomal protein L13P; n=1; uncultured... 45 9e-04
UniRef50_Q9YB50 Cluster: 50S ribosomal protein L13P; n=1; Aeropy... 45 0.001
UniRef50_A1RWV8 Cluster: Ribosomal protein L13; n=1; Thermofilum... 44 0.002
UniRef50_Q6LXM6 Cluster: 50S ribosomal protein L13P; n=6; Methan... 40 0.043
UniRef50_P95991 Cluster: 50S ribosomal protein L13P; n=3; Sulfol... 38 0.10
UniRef50_Q3LWM1 Cluster: Ribosomal protein L13A; n=1; Bigelowiel... 37 0.23
UniRef50_Q6L294 Cluster: 50S ribosomal protein L13P; n=4; Thermo... 36 0.71
UniRef50_Q9AVH9 Cluster: Putative senescence-associated protein;... 35 1.2
UniRef50_P39473 Cluster: 50S ribosomal protein L13P; n=4; Thermo... 35 1.2
UniRef50_Q8IL67 Cluster: Metalloendopeptidase, putative; n=2; Pl... 34 1.6
UniRef50_Q3AW67 Cluster: 50S ribosomal protein L13; n=12; Bacter... 34 2.2
UniRef50_Q7V521 Cluster: 50S ribosomal protein L13; n=32; Bacter... 33 3.8
UniRef50_A6SZB5 Cluster: Uncharacterized giant conserved protein... 33 5.0
UniRef50_A7NQ44 Cluster: Putative uncharacterized protein; n=1; ... 32 6.6
UniRef50_A6T0L1 Cluster: Uncharacterized giant conserved protein... 32 8.7
UniRef50_Q1AU63 Cluster: 50S ribosomal protein L13; n=3; Bacteri... 32 8.7
>UniRef50_Q1HR63 Cluster: 60S ribosomal protein L13a; n=2; Aedes
aegypti|Rep: 60S ribosomal protein L13a - Aedes aegypti
(Yellowfever mosquito)
Length = 236
Score = 165 bits (400), Expect = 7e-40
Identities = 67/108 (62%), Positives = 83/108 (76%)
Frame = +2
Query: 182 NKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCP 361
NK+K +++LRKRCNVNPARGPFHFRAPS++LWK VRGM+PHKT+RG NAL+RL+ Y+G P
Sbjct: 52 NKIKFLAYLRKRCNVNPARGPFHFRAPSRMLWKAVRGMVPHKTKRGHNALKRLKVYEGIP 111
Query: 362 PPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLE 505
PFD CL+P R +C VGR++HE+GWKYRDVV LE
Sbjct: 112 SPFDRQKRLCVPTAMRQLCLRPDRKFCDVGRVAHEVGWKYRDVVNNLE 159
Score = 58.8 bits (136), Expect = 7e-08
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +1
Query: 70 GHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFF 177
GHLLGRLA+VIAK +L G KVVVVRCE + +SG+FF
Sbjct: 15 GHLLGRLASVIAKQILNGRKVVVVRCEDLQLSGHFF 50
>UniRef50_Q9VNE9 Cluster: 60S ribosomal protein L13A; n=127;
Eukaryota|Rep: 60S ribosomal protein L13A - Drosophila
melanogaster (Fruit fly)
Length = 205
Score = 151 bits (366), Expect = 9e-36
Identities = 64/108 (59%), Positives = 79/108 (73%)
Frame = +2
Query: 182 NKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCP 361
NK+K +++LRKRCNVNPARGPFHFRAPS+I +K VRGMIPHKT+RG+ AL RLR +DG P
Sbjct: 52 NKIKFLAYLRKRCNVNPARGPFHFRAPSRIFYKAVRGMIPHKTKRGQAALARLRVFDGIP 111
Query: 362 PPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLE 505
P+D L+ R YC VGRLSHE+GW Y+DV++ LE
Sbjct: 112 SPYDKRRRVVVPIAMRVLTLRSDRKYCQVGRLSHEVGWHYQDVIKSLE 159
Score = 60.9 bits (141), Expect = 2e-08
Identities = 25/36 (69%), Positives = 33/36 (91%)
Frame = +1
Query: 70 GHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFF 177
GHLLGRLA+V+AK LL+G KV VVRCE++N+SG+F+
Sbjct: 15 GHLLGRLASVVAKYLLQGGKVAVVRCEELNLSGHFY 50
>UniRef50_P93099 Cluster: 60S ribosomal protein L13a; n=4;
Eukaryota|Rep: 60S ribosomal protein L13a - Cyanophora
paradoxa
Length = 200
Score = 140 bits (340), Expect = 1e-32
Identities = 61/119 (51%), Positives = 84/119 (70%), Gaps = 1/119 (0%)
Frame = +2
Query: 152 KSISLATSLV-NKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNA 328
+ I+++ SL NKLK +FL+KR N NP RGPFHFR+P++ILW+T+RGMIPHKT RG A
Sbjct: 38 EEINISGSLFRNKLKFHAFLKKRMNTNPRRGPFHFRSPARILWRTIRGMIPHKTPRGAAA 97
Query: 329 LRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLE 505
L RL+ ++G PPP+D LKPGR +C +GRL+ E+GW++ D+V +LE
Sbjct: 98 LERLKAFEGVPPPYDKMKRMVIPQALRVLRLKPGRKFCVLGRLATEVGWRHSDLVTRLE 156
Score = 54.0 bits (124), Expect = 2e-06
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +1
Query: 70 GHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFF 177
GHLLGRLAA +AK LL G +VV VR E+INISG+ F
Sbjct: 12 GHLLGRLAATLAKELLNGQRVVAVRTEEINISGSLF 47
>UniRef50_Q6RH10 Cluster: 60S ribosomal protein L13a; n=5;
Magnoliophyta|Rep: 60S ribosomal protein L13a - Capsicum
annuum (Bell pepper)
Length = 220
Score = 133 bits (321), Expect = 3e-30
Identities = 59/119 (49%), Positives = 78/119 (65%), Gaps = 1/119 (0%)
Frame = +2
Query: 152 KSISLATSLVN-KLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNA 328
+ I L+ LV K+K + FLRKR N P+ GP HFRAPSKILW+T+RGMIPHKT+RG A
Sbjct: 44 EEICLSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKILWRTIRGMIPHKTKRGAAA 103
Query: 329 LRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLE 505
L RL+ Y+G PPP+D L+ G YC +G+LS E+GW + D +++LE
Sbjct: 104 LARLKVYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGKLSSEVGWNHYDTIKELE 162
Score = 48.4 bits (110), Expect = 9e-05
Identities = 20/38 (52%), Positives = 30/38 (78%)
Frame = +1
Query: 73 HLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFSEQ 186
H+LGRL++++AK LL G +VVVVRCE+I +SG ++
Sbjct: 19 HMLGRLSSILAKELLNGQRVVVVRCEEICLSGGLVRQK 56
>UniRef50_Q75J15 Cluster: Putative ribosomal protein L13a; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
ribosomal protein L13a - Oryza sativa subsp. japonica
(Rice)
Length = 172
Score = 114 bits (275), Expect = 1e-24
Identities = 52/118 (44%), Positives = 70/118 (59%)
Frame = +2
Query: 143 AANKSISLATSLVNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGK 322
A + +S S++ K L R N P+ GP HFR+P+KILW+TVRGMIPHKT+RG+
Sbjct: 16 ARHHMLSRLASIIAKELLNGKRVVRMNTKPSHGPIHFRSPAKILWRTVRGMIPHKTKRGE 75
Query: 323 NALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVR 496
AL RL+ Y+ PP+D L+PG YC +G+LS E+GW Y D +R
Sbjct: 76 AALARLKAYEVVTPPYDRTKRMVIPDALKVLRLQPGHKYCLLGQLSKEVGWNYYDTIR 133
>UniRef50_Q7R0D6 Cluster: GLP_608_8346_8939; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_608_8346_8939 - Giardia lamblia ATCC
50803
Length = 197
Score = 108 bits (260), Expect = 6e-23
Identities = 49/107 (45%), Positives = 65/107 (60%)
Frame = +2
Query: 185 KLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPP 364
K + + KR N N RGPFHFRAP++I+ +T+RGMIP+KT RG +A+ RLR YDG PP
Sbjct: 48 KAHYLKKMHKRTNFNHLRGPFHFRAPAEIVRRTIRGMIPYKTVRGSDAMSRLRVYDGIPP 107
Query: 365 PFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLE 505
CL+P R C VGR++HEIGW++ V + E
Sbjct: 108 CCARYKRVVCPSAMAYLCLRPERRRCEVGRVAHEIGWQHAADVERYE 154
Score = 49.2 bits (112), Expect = 5e-05
Identities = 21/35 (60%), Positives = 29/35 (82%)
Frame = +1
Query: 70 GHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNF 174
GH+LGRL+A++AK LL G++V +VRCE+ ISG F
Sbjct: 10 GHILGRLSAIVAKELLHGHEVALVRCEKAIISGAF 44
>UniRef50_Q245E7 Cluster: Ribosomal protein L13 containing protein;
n=16; Alveolata|Rep: Ribosomal protein L13 containing
protein - Tetrahymena thermophila SB210
Length = 270
Score = 102 bits (245), Expect = 4e-21
Identities = 49/119 (41%), Positives = 70/119 (58%), Gaps = 1/119 (0%)
Frame = +2
Query: 152 KSISLATSLV-NKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNA 328
++I+++ SL N++K FL K N NP RG HFRAPS+I W+ VRGM+PHKT +G A
Sbjct: 110 EAINISGSLFRNRVKFSEFLNKWMNHNPRRGVQHFRAPSRIFWRAVRGMLPHKTPKGAAA 169
Query: 329 LRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLE 505
L RL+ ++G P P+D L+ R C +G LS +GW + ++ KLE
Sbjct: 170 LERLKIFEGIPTPYDRVKKQVVVDALKVQRLRNSRPVCKLGDLSASVGWGKQTLIEKLE 228
Score = 53.6 bits (123), Expect = 2e-06
Identities = 25/43 (58%), Positives = 32/43 (74%)
Frame = +1
Query: 64 ACGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFSEQTQ 192
A GHLLGRLA+ +AK LL G ++VVVR E INISG+ F + +
Sbjct: 82 AKGHLLGRLASYVAKELLSGQRIVVVRTEAINISGSLFRNRVK 124
>UniRef50_A4S5V9 Cluster: Ribosomal protein L13a, component of
cytosolic 80S ribosome and 60S large subunit; n=2;
Ostreococcus|Rep: Ribosomal protein L13a, component of
cytosolic 80S ribosome and 60S large subunit -
Ostreococcus lucimarinus CCE9901
Length = 199
Score = 102 bits (244), Expect = 5e-21
Identities = 41/101 (40%), Positives = 59/101 (58%)
Frame = +2
Query: 203 FLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXX 382
+ KR N NP +GP+H+ +PS++ WKTVRGM+PHKT RG A R + Y+G P P+D
Sbjct: 55 YKNKRMNTNPKKGPYHYTSPSRLFWKTVRGMLPHKTVRGAAAFERFKAYEGIPAPYDKVK 114
Query: 383 XXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLE 505
L G +C +G +IGWK+ +V++LE
Sbjct: 115 RAVVPEALKVLRLGEGHRFCVLGDFCEQIGWKHGAIVKELE 155
Score = 44.0 bits (99), Expect = 0.002
Identities = 21/35 (60%), Positives = 27/35 (77%)
Frame = +1
Query: 64 ACGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISG 168
A GHL GRLA++++K LL+G VVVVR E I +SG
Sbjct: 9 AKGHLFGRLASIVSKQLLQGQHVVVVRTEGICMSG 43
>UniRef50_Q4Q3B9 Cluster: 60S ribosomal protein L13a, putative;
n=10; Trypanosomatidae|Rep: 60S ribosomal protein L13a,
putative - Leishmania major
Length = 222
Score = 94.3 bits (224), Expect = 1e-18
Identities = 46/113 (40%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
Frame = +2
Query: 170 TSLVNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTY 349
T + NK+K + +LRKR NP +GPFH RAPS + +TVR M+P T+RG AL L Y
Sbjct: 64 TEIRNKIKYLQYLRKRKLTNPTKGPFHHRAPSDVFVRTVRSMLPRYTKRGMKALNSLVAY 123
Query: 350 DGCPPPFDNXXXXXXX-XXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLE 505
+G PP C + R Y +G + +GWKY DVV LE
Sbjct: 124 EGIPPNVVRTGGRVVIPRAQRHVCYRSERPYTVLGNMCKHVGWKYSDVVANLE 176
Score = 50.4 bits (115), Expect = 2e-05
Identities = 22/32 (68%), Positives = 27/32 (84%)
Frame = +1
Query: 73 HLLGRLAAVIAKVLLEGNKVVVVRCEQINISG 168
H+LGR AAV+AK LL G K+ VVRCEQ+NI+G
Sbjct: 32 HVLGRAAAVVAKQLLLGKKITVVRCEQLNIAG 63
>UniRef50_Q98RZ9 Cluster: 60s ribosomal protein L13A; n=1;
Guillardia theta|Rep: 60s ribosomal protein L13A -
Guillardia theta (Cryptomonas phi)
Length = 194
Score = 90.2 bits (214), Expect = 2e-17
Identities = 42/107 (39%), Positives = 62/107 (57%)
Frame = +2
Query: 179 VNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGC 358
VNK K S +K+ N NP RGPFHF++PSKIL++T++ MIPHKT RG AL+ L+ ++G
Sbjct: 48 VNKYK--SIFKKKTNTNPRRGPFHFKSPSKILYQTIKRMIPHKTMRGSKALKNLKIFEGL 105
Query: 359 PPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRK 499
P F +K R ++G++ +GWK R + +
Sbjct: 106 PRIFSKIKKEKFFEAFRYKVIKNYRKTVNLGKVCEVLGWKNRKFIEQ 152
Score = 41.9 bits (94), Expect = 0.008
Identities = 16/35 (45%), Positives = 28/35 (80%)
Frame = +1
Query: 64 ACGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISG 168
A HLLGR+A++ AK +L+G+K++++R E +I+G
Sbjct: 8 AKNHLLGRMASICAKKILQGDKIIIIRSELTSITG 42
>UniRef50_UPI0000EB39CE Cluster: UPI0000EB39CE related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB39CE UniRef100
entry - Canis familiaris
Length = 172
Score = 68.1 bits (159), Expect(2) = 7e-17
Identities = 27/43 (62%), Positives = 35/43 (81%)
Frame = +2
Query: 182 NKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKT 310
NKLK ++FL K+ N NP+RGP+ F+APS+I W T RGM+PHKT
Sbjct: 49 NKLKYLAFLCKQMNTNPSRGPYRFQAPSRIFWWTARGMLPHKT 91
Score = 46.4 bits (105), Expect = 4e-04
Identities = 25/36 (69%), Positives = 28/36 (77%)
Frame = +1
Query: 70 GHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFF 177
GHLLG LAA +AK +L G KVVVV E INISGNF+
Sbjct: 13 GHLLGCLAATVAKQVL-GCKVVVVHYEGINISGNFY 47
Score = 41.1 bits (92), Expect(2) = 7e-17
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = +2
Query: 419 LKPGRNYCHVGRLSHEIGWKYRDVVRKLE 505
LKP R + ++GRL+H++GWKY+ V LE
Sbjct: 98 LKPTRKFAYLGRLAHKVGWKYQAVTATLE 126
>UniRef50_A2DZ26 Cluster: Ribosomal protein L13, putative; n=7;
Trichomonas vaginalis G3|Rep: Ribosomal protein L13,
putative - Trichomonas vaginalis G3
Length = 200
Score = 83.4 bits (197), Expect = 3e-15
Identities = 42/101 (41%), Positives = 55/101 (54%)
Frame = +2
Query: 203 FLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXX 382
FL K N NP GPFH RAP +I + VRGMIP+KT RG +A L+ Y+G P + +
Sbjct: 55 FLNKTTNSNPRDGPFHQRAPHEIFARAVRGMIPYKTHRGADAFANLQCYEGIPAKYVSYK 114
Query: 383 XXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLE 505
+ R +GRLS +GWKY +VV +LE
Sbjct: 115 RLVIPHALRCVSIHTDRPTTKLGRLSTTMGWKYGNVVAQLE 155
Score = 51.6 bits (118), Expect = 1e-05
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = +1
Query: 64 ACGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISG 168
A GH+ GRLAA +AK LL+G KVVVVRCE+I ++G
Sbjct: 9 AKGHIQGRLAAAVAKQLLKGRKVVVVRCEEIELNG 43
>UniRef50_Q8SS16 Cluster: 60S RIBOSOMAL PROTEIN L13A; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L13A
- Encephalitozoon cuniculi
Length = 198
Score = 81.8 bits (193), Expect = 8e-15
Identities = 41/104 (39%), Positives = 53/104 (50%)
Frame = +2
Query: 191 KLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPF 370
K +L KRC VNP RGPFHFR P L K +R MI +K RGK A+ RL TY+G P
Sbjct: 53 KFKQYLNKRCLVNPRRGPFHFREPRMHLAKIIRRMISYKKPRGKAAMSRLATYEGIPREL 112
Query: 371 DNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKL 502
+ + P R Y +G+L GWK+ + + L
Sbjct: 113 EGQPRYKVTCAFVKYTGNPNR-YVTLGKLLSMFGWKHAEAAKSL 155
Score = 34.3 bits (75), Expect = 1.6
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +1
Query: 64 ACGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGN 171
A G + G+LAA +AK+LLEG +V VV E+ G+
Sbjct: 11 ATGQVAGKLAAKVAKLLLEGVRVTVVCAEEAVFVGS 46
>UniRef50_Q4GXI8 Cluster: Ribomsomal protein L13Ae; n=2;
Neoptera|Rep: Ribomsomal protein L13Ae - Cicindela
campestris (Green tiger beetle)
Length = 78
Score = 62.1 bits (144), Expect = 7e-09
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = +2
Query: 416 CLKPGRNYCHVGRLSHEIGWKYRDVVRKLE 505
CLKPGR YCHVGRLSHE+GWKY+ V+ LE
Sbjct: 4 CLKPGRKYCHVGRLSHEVGWKYQKVIESLE 33
>UniRef50_O59300 Cluster: 50S ribosomal protein L13P; n=45;
root|Rep: 50S ribosomal protein L13P - Pyrococcus
horikoshii
Length = 142
Score = 62.1 bits (144), Expect = 7e-09
Identities = 31/89 (34%), Positives = 47/89 (52%)
Frame = +2
Query: 215 RCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXX 394
R NP RGPF+ + +I+ +T+RGM+P KT+RG+ A RRL+ Y G P F +
Sbjct: 56 RTLTNPRRGPFYPKRSDEIVRRTIRGMLPWKTDRGRKAFRRLKVYVGIPKEFQDKQLETI 115
Query: 395 XXXXXXFCLKPGRNYCHVGRLSHEIGWKY 481
+P Y VG ++ +G K+
Sbjct: 116 VEAHVSRLSRP--KYVTVGEVAKFLGGKF 142
Score = 41.9 bits (94), Expect = 0.008
Identities = 20/36 (55%), Positives = 28/36 (77%)
Frame = +1
Query: 64 ACGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGN 171
A G +LGRLA+ +AK+LLEG +VV+V E+ I+GN
Sbjct: 6 ADGLILGRLASRVAKMLLEGEEVVIVNAEKAVITGN 41
>UniRef50_Q8TVB6 Cluster: 50S ribosomal protein L13P; n=1;
Methanopyrus kandleri|Rep: 50S ribosomal protein L13P -
Methanopyrus kandleri
Length = 159
Score = 58.8 bits (136), Expect = 7e-08
Identities = 35/110 (31%), Positives = 53/110 (48%)
Frame = +2
Query: 149 NKSISLATSLVNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNA 328
N ++ T N +K +L+K +P +GPF+ R P I + VRGM+P KT+RG+ A
Sbjct: 46 NTEKAIITGKKNTIK-EEWLQKIQRGDPKKGPFYPRRPDLIFRRVVRGMLPWKTKRGREA 104
Query: 329 LRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWK 478
+RLR Y G P + Y +G LS E+G++
Sbjct: 105 FKRLRAYIGTPRWVEEANIEPERVAEADMSRLGHLWYVTLGELSEELGYQ 154
Score = 34.3 bits (75), Expect = 1.6
Identities = 14/31 (45%), Positives = 24/31 (77%)
Frame = +1
Query: 76 LLGRLAAVIAKVLLEGNKVVVVRCEQINISG 168
+LGRLA+V+AK +L+G ++ V+ E+ I+G
Sbjct: 24 VLGRLASVVAKRILKGERIAVINTEKAIITG 54
>UniRef50_A7DRR6 Cluster: Ribosomal protein L13; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L13
- Candidatus Nitrosopumilus maritimus SCM1
Length = 154
Score = 55.2 bits (127), Expect = 8e-07
Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +2
Query: 203 FLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPH-KTERGKNALRRLRTYDGCPPPFDNX 379
FL +NP GP H+R P I+ K +R M+P+ + GK +++RLR Y G P +
Sbjct: 64 FLEINSIINPKHGPVHYRRPDTIITKMIRQMLPYDRKPSGKESIKRLRAYIGSPKELKSL 123
Query: 380 XXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGW 475
K NY +G L IGW
Sbjct: 124 EKIQFEKAKIK---KSPSNYTTMGELCRVIGW 152
Score = 39.1 bits (87), Expect = 0.057
Identities = 16/35 (45%), Positives = 26/35 (74%)
Frame = +1
Query: 64 ACGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISG 168
A H+ GRL++ +AK+L +G++V +V CE+I SG
Sbjct: 18 ATNHIAGRLSSNVAKLLKQGHRVSIVNCEKIMYSG 52
>UniRef50_A0RXP5 Cluster: Ribosomal protein L13; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L13 - Cenarchaeum
symbiosum
Length = 139
Score = 55.2 bits (127), Expect = 8e-07
Identities = 29/91 (31%), Positives = 41/91 (45%)
Frame = +2
Query: 203 FLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXX 382
FL+ ++P GP+H R P I+ + +RGM+P K GK A RLR Y G P +
Sbjct: 50 FLKIASIIHPEHGPYHPRRPDTIMTRMIRGMLPRKKPSGKAAHSRLRAYIGSPGHLKSFE 109
Query: 383 XXXXXXXXXXFCLKPGRNYCHVGRLSHEIGW 475
+P NY + L +GW
Sbjct: 110 KRKLKGAEIT---RPTANYTTMADLGETVGW 137
Score = 46.8 bits (106), Expect = 3e-04
Identities = 19/35 (54%), Positives = 28/35 (80%)
Frame = +1
Query: 64 ACGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISG 168
A H+ GRLA+ +AK+LLEGN+V ++ CE++ ISG
Sbjct: 4 ATDHIAGRLASNVAKMLLEGNRVSIINCEKVMISG 38
>UniRef50_Q8PW45 Cluster: 50S ribosomal protein L13P; n=11;
Euryarchaeota|Rep: 50S ribosomal protein L13P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 140
Score = 54.0 bits (124), Expect = 2e-06
Identities = 25/81 (30%), Positives = 43/81 (53%)
Frame = +2
Query: 239 GPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFC 418
GP+ + P +IL +T+RGM+P+K RG++A+ RL+ Y G P++
Sbjct: 62 GPYFPKRPDRILKRTIRGMLPYKRARGRDAMSRLKVYVGV--PYELKGAETTTIADADMR 119
Query: 419 LKPGRNYCHVGRLSHEIGWKY 481
L Y +G +S ++G K+
Sbjct: 120 LLSSNKYVELGEVSQKMGSKF 140
Score = 33.5 bits (73), Expect = 2.8
Identities = 18/37 (48%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = +1
Query: 64 ACGHLLGRLAAVIAKVLLEGN-KVVVVRCEQINISGN 171
A G +LGRLA+ +AK LL G+ KV ++ E+ ISG+
Sbjct: 6 AKGLILGRLASSVAKQLLSGDEKVYIINAEKAIISGS 42
>UniRef50_O29137 Cluster: 50S ribosomal protein L13P; n=1;
Archaeoglobus fulgidus|Rep: 50S ribosomal protein L13P -
Archaeoglobus fulgidus
Length = 156
Score = 50.0 bits (114), Expect = 3e-05
Identities = 21/42 (50%), Positives = 30/42 (71%)
Frame = +2
Query: 236 RGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCP 361
+GP+ R P +I +TVRGM+P K+ RG++A RRLR + G P
Sbjct: 75 KGPYFPRHPERIFKRTVRGMLPWKSSRGRDAYRRLRVFMGVP 116
Score = 41.5 bits (93), Expect = 0.011
Identities = 19/36 (52%), Positives = 27/36 (75%)
Frame = +1
Query: 64 ACGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGN 171
A GH+LGRL++ IAK LL G ++VVV E+ I+G+
Sbjct: 21 ASGHILGRLSSKIAKRLLNGERIVVVNAEKAVITGD 56
>UniRef50_Q74ND7 Cluster: 50S ribosomal protein L13P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L13P -
Nanoarchaeum equitans
Length = 162
Score = 48.8 bits (111), Expect = 7e-05
Identities = 28/85 (32%), Positives = 47/85 (55%)
Frame = +2
Query: 107 RSFSKGTKLLWFAANKSISLATSLVNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTV 286
R+ +G ++ A K+I T N +K +L+K + +GPF+ + P IL + +
Sbjct: 25 RNLKRGYRVKIVNAEKAI--ITGDPNMVK-KEWLQKVKRGDYYKGPFYPKRPDNILKRVI 81
Query: 287 RGMIPHKTERGKNALRRLRTYDGCP 361
RGM+P KT RG+ L+ ++ Y G P
Sbjct: 82 RGMLPRKTARGRELLKNVKVYIGVP 106
>UniRef50_A7D2Q7 Cluster: Ribosomal protein L13; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein L13 -
Halorubrum lacusprofundi ATCC 49239
Length = 149
Score = 48.4 bits (110), Expect = 9e-05
Identities = 21/60 (35%), Positives = 33/60 (55%)
Frame = +2
Query: 182 NKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCP 361
N+ M R + GP++ + P +I + +RGM+P+KTE G+ AL +R Y G P
Sbjct: 49 NEEATMETYHTRAELGSDSGPYYPKRPDRIFKRAIRGMLPYKTEDGREALSNVRVYVGNP 108
>UniRef50_UPI0000EBD60B Cluster: PREDICTED: similar to ribosomal
protein L13a; n=2; Bos taurus|Rep: PREDICTED: similar to
ribosomal protein L13a - Bos taurus
Length = 112
Score = 48.0 bits (109), Expect = 1e-04
Identities = 27/103 (26%), Positives = 43/103 (41%)
Frame = +2
Query: 197 MSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDN 376
+ + + NP+ GPF F P I TV+ ++P+K + + L L+ +D +
Sbjct: 6 LDLFHRPLDTNPSNGPFQFWVPKHIFRHTVQDLLPYKIKHDQETLEHLKVFDKTKQMIIS 65
Query: 377 XXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLE 505
CL G L++E GWKY+ V LE
Sbjct: 66 VQICVSEATSRFACL---------GYLTYESGWKYQVVTNTLE 99
>UniRef50_Q53K43 Cluster: Retrotransposon protein, putative,
unclassified; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Retrotransposon protein, putative,
unclassified - Oryza sativa subsp. japonica (Rice)
Length = 512
Score = 48.0 bits (109), Expect = 1e-04
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = +2
Query: 314 RGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHE 466
RG+ AL RL+ Y+G PPP+D L+PG YC +G+LS E
Sbjct: 9 RGEAALARLKAYEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLLGQLSKE 59
>UniRef50_P29198 Cluster: 50S ribosomal protein L13P; n=4;
Halobacteriaceae|Rep: 50S ribosomal protein L13P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 145
Score = 47.2 bits (107), Expect = 2e-04
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = +2
Query: 212 KRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCP 361
KR ++ G F+ + P I +T+RGM+PHK +RG+ A +R Y G P
Sbjct: 59 KRVDIGNDNGYFYPKRPDGIFKRTIRGMLPHKKQRGREAFESVRVYLGNP 108
>UniRef50_O18718 Cluster: Ribosomal protein L13A; n=4;
Entamoeba|Rep: Ribosomal protein L13A - Entamoeba dispar
Length = 87
Score = 46.8 bits (106), Expect = 3e-04
Identities = 19/33 (57%), Positives = 27/33 (81%)
Frame = +1
Query: 70 GHLLGRLAAVIAKVLLEGNKVVVVRCEQINISG 168
GH+LGR+A+V+AK LL G K+V+VRCE + + G
Sbjct: 18 GHVLGRVASVVAKHLLLGQKIVLVRCEDLQVCG 50
Score = 34.7 bits (76), Expect = 1.2
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 203 FLRKRCNVNPARGPFHFRAPSKILWK 280
+ RKR N NP RG FH R+P++++ K
Sbjct: 62 YQRKRVNTNPTRGAFHHRSPAEMVRK 87
>UniRef50_Q8ZYQ1 Cluster: 50S ribosomal protein L13P; n=5;
Thermoproteaceae|Rep: 50S ribosomal protein L13P -
Pyrobaculum aerophilum
Length = 187
Score = 46.4 bits (105), Expect = 4e-04
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = +2
Query: 215 RCNVNPAR-GPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCP 361
R + NP + GP R P ++ + VRGM+P K+E G++AL+RLR Y P
Sbjct: 76 RTHYNPEKAGPKVPRRPDRVFKRIVRGMLPKKSETGRSALKRLRVYMSIP 125
Score = 34.7 bits (76), Expect = 1.2
Identities = 18/36 (50%), Positives = 25/36 (69%), Gaps = 2/36 (5%)
Frame = +1
Query: 70 GHLLGRLAAVIAKVLLE--GNKVVVVRCEQINISGN 171
GH+ GRLA IAK LLE ++VVV E++ I+G+
Sbjct: 25 GHVAGRLATYIAKALLERPNLRIVVVNAEKLVITGD 60
>UniRef50_Q2Q0G5 Cluster: Ribosomal protein L13P; n=1; uncultured
organism HF70_19B12|Rep: Ribosomal protein L13P -
uncultured organism HF70_19B12
Length = 161
Score = 45.2 bits (102), Expect = 9e-04
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +2
Query: 149 NKSISLATSLVNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPH-KTERGKN 325
N +++ T +++ L + RK +P +GPF R P IL +TVRGM+P+ K G+
Sbjct: 43 NAEMAIVTGPKDRI-LADYDRKYKLNHPRKGPFFPRMPDMILKRTVRGMLPYQKKSSGRQ 101
Query: 326 ALRRLRTYDGCP 361
A++ LR G P
Sbjct: 102 AVKDLRVMIGTP 113
>UniRef50_Q9YB50 Cluster: 50S ribosomal protein L13P; n=1; Aeropyrum
pernix|Rep: 50S ribosomal protein L13P - Aeropyrum
pernix
Length = 155
Score = 44.8 bits (101), Expect = 0.001
Identities = 23/75 (30%), Positives = 34/75 (45%)
Frame = +2
Query: 254 RAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGR 433
R P ++ VRGM+P RG+ AL RLR Y G P D +
Sbjct: 79 RTPQRLFKHAVRGMLPKNKARGRRALARLRVYVGVP---DELKGREFVRFPEADASRLSS 135
Query: 434 NYCHVGRLSHEIGWK 478
+Y +G ++ ++GWK
Sbjct: 136 HYIELGAVARQLGWK 150
Score = 38.3 bits (85), Expect = 0.10
Identities = 18/34 (52%), Positives = 27/34 (79%)
Frame = +1
Query: 70 GHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGN 171
G ++GRLA+V+AK+LL G +V VV E+I +SG+
Sbjct: 17 GMIMGRLASVVAKLLLAGWRVNVVNAEKIVLSGD 50
>UniRef50_A1RWV8 Cluster: Ribosomal protein L13; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L13 - Thermofilum
pendens (strain Hrk 5)
Length = 154
Score = 44.4 bits (100), Expect = 0.002
Identities = 20/33 (60%), Positives = 28/33 (84%)
Frame = +1
Query: 70 GHLLGRLAAVIAKVLLEGNKVVVVRCEQINISG 168
GH+ GRLA+V+AK LL+G++VVVV E+I I+G
Sbjct: 14 GHIAGRLASVVAKRLLKGDRVVVVNAEKIVITG 46
Score = 41.5 bits (93), Expect = 0.011
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +2
Query: 227 NPA-RGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDN 376
NP RGP + + P ++ + VRGM+P + G+++L+RL Y G P + N
Sbjct: 67 NPELRGPKYPKTPDRLFKRMVRGMLPMEKTIGRDSLKRLTVYVGLPDEYRN 117
>UniRef50_Q6LXM6 Cluster: 50S ribosomal protein L13P; n=6;
Methanococcales|Rep: 50S ribosomal protein L13P -
Methanococcus maripaludis
Length = 137
Score = 39.5 bits (88), Expect = 0.043
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +2
Query: 206 LRKRCNV-NPAR-GPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCP 361
LR R ++ NP + GP + R P I+ + +RGM+P+K RG A ++++ G P
Sbjct: 52 LRTRKSISNPKKMGPKYPRRPDDIVRRVIRGMLPYKKPRGVEAFKKIKIEVGVP 105
Score = 32.7 bits (71), Expect = 5.0
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +1
Query: 76 LLGRLAAVIAKVLLEGNKVVVVRCEQINISGN 171
++GRLA+ +AK+ L G ++ VV E+ ++GN
Sbjct: 10 VVGRLASYVAKLALSGEEITVVNAEKAIMTGN 41
>UniRef50_P95991 Cluster: 50S ribosomal protein L13P; n=3;
Sulfolobaceae|Rep: 50S ribosomal protein L13P -
Sulfolobus solfataricus
Length = 149
Score = 38.3 bits (85), Expect = 0.10
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 3/126 (2%)
Frame = +2
Query: 107 RSFSKGTKLLWFAANKSISLATS--LVNKLKLMSFLRKRCNVNPAR-GPFHFRAPSKILW 277
R +G K++ K++ ++ KL+ L + NP R G R+P I+
Sbjct: 28 RLLKEGKKVIIVNGEKAVISGEKNRVIESYKLL--LTVKTLFNPYRNGIRRPRSPINIVK 85
Query: 278 KTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRL 457
+T+RGM+P K+ +G+ L+ ++ Y G P F+ LK G+ Y V +
Sbjct: 86 RTIRGMLP-KSSKGRRMLKNVKIYVGVPKEFEGRQFIKFPDSDVS-RLK-GK-YVTVEVV 141
Query: 458 SHEIGW 475
S E+GW
Sbjct: 142 SKELGW 147
Score = 35.5 bits (78), Expect = 0.71
Identities = 15/33 (45%), Positives = 24/33 (72%)
Frame = +1
Query: 70 GHLLGRLAAVIAKVLLEGNKVVVVRCEQINISG 168
G +LGR+A+ + ++L EG KV++V E+ ISG
Sbjct: 16 GQILGRMASNVVRLLKEGKKVIIVNGEKAVISG 48
>UniRef50_Q3LWM1 Cluster: Ribosomal protein L13A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L13A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 181
Score = 37.1 bits (82), Expect = 0.23
Identities = 19/90 (21%), Positives = 37/90 (41%)
Frame = +2
Query: 215 RCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXX 394
+ NP +GP+ F PS +L K V+GM+ + + + ++ P +
Sbjct: 59 KTRTNPNKGPYFFSNPSSLLKKIVKGMLNKLNKSHTLLFKSVECFNDTPNRYIYNYKLFL 118
Query: 395 XXXXXXFCLKPGRNYCHVGRLSHEIGWKYR 484
+ LKP + + + + GW+ R
Sbjct: 119 KNSHKNYKLKPDSKFTKLYEILPKFGWQDR 148
>UniRef50_Q6L294 Cluster: 50S ribosomal protein L13P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L13P -
Picrophilus torridus
Length = 138
Score = 35.5 bits (78), Expect = 0.71
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +2
Query: 236 RGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDN 376
+GP++ + +IL +++ M+P K G AL+R Y P +N
Sbjct: 60 KGPYYPKTADRILKRSIGDMLPKKKTHGMEALKRCMVYANVPKSLEN 106
Score = 33.9 bits (74), Expect = 2.2
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 64 ACGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISG 168
A H+ GRL++ +AK LL G + +V ++ I+G
Sbjct: 6 ASNHIYGRLSSYVAKKLLNGESITIVNASKVVITG 40
>UniRef50_Q9AVH9 Cluster: Putative senescence-associated protein;
n=1; Pisum sativum|Rep: Putative senescence-associated
protein - Pisum sativum (Garden pea)
Length = 255
Score = 34.7 bits (76), Expect = 1.2
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = +1
Query: 76 LLGRLAAVIAKVLLEGNKVVVVRCEQINISG 168
+LGRLA+++AK L + +VRCE+I ISG
Sbjct: 1 MLGRLASIVAKELSMVRRSFLVRCEEICISG 31
>UniRef50_P39473 Cluster: 50S ribosomal protein L13P; n=4;
Thermoprotei|Rep: 50S ribosomal protein L13P -
Sulfolobus acidocaldarius
Length = 148
Score = 34.7 bits (76), Expect = 1.2
Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +2
Query: 227 NPAR-GPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCP 361
NP R G R P I+ +TVRGM+P K + GK R L+ Y G P
Sbjct: 66 NPYRQGIRRPRNPINIVKRTVRGMLP-KNKLGKQIYRNLKAYIGIP 110
Score = 33.9 bits (74), Expect = 2.2
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +1
Query: 64 ACGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISG 168
A +LGR++ IAK+L G KV VV E+ ISG
Sbjct: 12 ATNQILGRMSTHIAKLLKSGKKVYVVNAEKAIISG 46
>UniRef50_Q8IL67 Cluster: Metalloendopeptidase, putative; n=2;
Plasmodium falciparum|Rep: Metalloendopeptidase, putative
- Plasmodium falciparum (isolate 3D7)
Length = 1523
Score = 34.3 bits (75), Expect = 1.6
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = -1
Query: 234 AGFTLHLLRRNDISLSLFTKEVARDIDLFAANHNNF 127
AGF L++ N L L KEV I+LF N+NNF
Sbjct: 1391 AGFFTILVQTNPRDLELIKKEVLSCIELFTTNYNNF 1426
>UniRef50_Q3AW67 Cluster: 50S ribosomal protein L13; n=12;
Bacteria|Rep: 50S ribosomal protein L13 - Synechococcus
sp. (strain CC9902)
Length = 150
Score = 33.9 bits (74), Expect = 2.2
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 254 RAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPP 367
R P +I+ K ++GM+PH G+ R+L+ Y G P
Sbjct: 96 RIPERIVEKAIKGMLPHNA-LGRQMYRKLKVYKGTEHP 132
>UniRef50_Q7V521 Cluster: 50S ribosomal protein L13; n=32;
Bacteria|Rep: 50S ribosomal protein L13 -
Prochlorococcus marinus (strain MIT 9313)
Length = 150
Score = 33.1 bits (72), Expect = 3.8
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 254 RAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPP 367
R P +I+ K ++GM+PH G+ R+L+ Y G P
Sbjct: 96 RLPERIVEKAIKGMLPHNA-LGRQLFRKLKVYRGPEHP 132
>UniRef50_A6SZB5 Cluster: Uncharacterized giant conserved protein;
n=1; Janthinobacterium sp. Marseille|Rep:
Uncharacterized giant conserved protein -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 4130
Score = 32.7 bits (71), Expect = 5.0
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 70 GHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFSEQT 189
GH +G AA + L GN+V+ + IN+SG F+ QT
Sbjct: 590 GHSIGEWAAQGGTLTLGGNEVITQQGSAINLSGGSFNVQT 629
>UniRef50_A7NQ44 Cluster: Putative uncharacterized protein; n=1;
Roseiflexus castenholzii DSM 13941|Rep: Putative
uncharacterized protein - Roseiflexus castenholzii DSM
13941
Length = 758
Score = 32.3 bits (70), Expect = 6.6
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = -1
Query: 192 LSLFTKEVARDIDLFAANHNNFVPFEKDLGDDCRQTAQ--QMTTGHRSLW 49
L FT+E A + L++ NH+N+V +GDD Q HRS+W
Sbjct: 88 LEHFTRENAEKLLLWSVNHSNYVIVNIPIGDDWDQGEMYGNPYEQHRSVW 137
>UniRef50_A6T0L1 Cluster: Uncharacterized giant conserved protein;
n=1; Janthinobacterium sp. Marseille|Rep:
Uncharacterized giant conserved protein -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 4196
Score = 31.9 bits (69), Expect = 8.7
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 70 GHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFSEQT 189
GH +G AA V L G++V+ + IN+SG F+ QT
Sbjct: 594 GHSIGEWAAQGGTVTLGGSEVITQQGSAINLSGGSFNVQT 633
>UniRef50_Q1AU63 Cluster: 50S ribosomal protein L13; n=3;
Bacteria|Rep: 50S ribosomal protein L13 - Rubrobacter
xylanophilus (strain DSM 9941 / NBRC 16129)
Length = 143
Score = 31.9 bits (69), Expect = 8.7
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2
Query: 254 RAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPP 367
+ P +IL + VRGM+P KT + L++LR Y G P
Sbjct: 95 KRPEEILRQAVRGMMP-KTRLARRQLKKLRIYAGPEHP 131
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 542,647,878
Number of Sequences: 1657284
Number of extensions: 10857837
Number of successful extensions: 27302
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 26509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27288
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30946432294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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