Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_G08
         (510 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    30   0.010
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    30   0.010
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.52 
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   2.1  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 30.3 bits (65), Expect = 0.010
 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = +2

Query: 188 LKLMSFLRKRCNVNPARGPFHFRAP--SKILWKTVRGMI 298
           ++ +SF  K CN+     P+ F  P   K LWK ++G++
Sbjct: 11  IRSLSFFYKICNIFGIVPPYSFEKPDSQKSLWKKIQGVV 49


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 30.3 bits (65), Expect = 0.010
 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = +2

Query: 188 LKLMSFLRKRCNVNPARGPFHFRAP--SKILWKTVRGMI 298
           ++ +SF  K CN+     P+ F  P   K LWK ++G++
Sbjct: 11  IRSLSFFYKICNIFGIVPPYSFEKPDSQKSLWKKIQGVV 49


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 24.6 bits (51), Expect = 0.52
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 121 LREGPWR*LPPDGPADDHRPSITM 50
           LR+   +  PPD P DD+ PS  +
Sbjct: 82  LRDAVEKRPPPDEPIDDYEPSFDL 105


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = -1

Query: 354 PSYVRSLLRAFLPRSVLCGIMPLTVFH 274
           PS+  S +R+FL  +    ++P  ++H
Sbjct: 34  PSFKLSKIRSFLNITASAVLLPFAIYH 60


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,022
Number of Sequences: 336
Number of extensions: 2719
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12154132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)