Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_G08
(510 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protei... 142 5e-34
BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a ... 142 5e-34
BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a ... 142 5e-34
BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a ... 142 5e-34
BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a ... 142 5e-34
BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein. 142 5e-34
BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a ... 142 5e-34
BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a ... 142 5e-34
BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a ... 142 5e-34
AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a ... 142 5e-34
AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a ... 140 2e-33
AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA seq... 136 4e-32
BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein. 124 2e-28
AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a ... 124 2e-28
BC067891-1|AAH67891.1| 102|Homo sapiens Unknown (protein for MG... 59 1e-08
BC130622-1|AAI30623.1| 756|Homo sapiens deoxynucleotidyltransfe... 30 4.1
BC047688-1|AAH47688.1| 523|Homo sapiens DNTTIP2 protein protein. 30 4.1
AY336729-1|AAR02407.1| 756|Homo sapiens LPTS-RP2 protein. 30 4.1
AL049796-1|CAI21812.1| 810|Homo sapiens acidic 82 kDa protein m... 30 4.1
AK222722-1|BAD96442.1| 756|Homo sapiens estrogen receptor bindi... 30 4.1
AB046574-1|BAD08331.1| 756|Homo sapiens TdT interacting factor ... 30 4.1
U36619-1|AAC16921.1| 176|Homo sapiens Y-chromosome RNA recognit... 29 9.4
AF026564-1|AAC16916.1| 318|Homo sapiens RNA binding protein pro... 29 9.4
>X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protein
protein.
Length = 203
Score = 142 bits (345), Expect = 5e-34
Identities = 60/108 (55%), Positives = 78/108 (72%)
Frame = +2
Query: 182 NKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCP 361
NKLK ++FLRKR N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG P
Sbjct: 50 NKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIP 109
Query: 362 PPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLE 505
PP+D LKP R + ++GRL+HE+GWKY+ V LE
Sbjct: 110 PPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLE 157
Score = 61.7 bits (143), Expect = 1e-09
Identities = 28/36 (77%), Positives = 32/36 (88%)
Frame = +1
Query: 70 GHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFF 177
GHLLGRLAA++AK +L G KVVVVRCE INISGNF+
Sbjct: 13 GHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFY 48
>BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 142 bits (345), Expect = 5e-34
Identities = 60/108 (55%), Positives = 78/108 (72%)
Frame = +2
Query: 182 NKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCP 361
NKLK ++FLRKR N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG P
Sbjct: 50 NKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIP 109
Query: 362 PPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLE 505
PP+D LKP R + ++GRL+HE+GWKY+ V LE
Sbjct: 110 PPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLE 157
Score = 61.7 bits (143), Expect = 1e-09
Identities = 28/36 (77%), Positives = 32/36 (88%)
Frame = +1
Query: 70 GHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFF 177
GHLLGRLAA++AK +L G KVVVVRCE INISGNF+
Sbjct: 13 GHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFY 48
>BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 142 bits (345), Expect = 5e-34
Identities = 60/108 (55%), Positives = 78/108 (72%)
Frame = +2
Query: 182 NKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCP 361
NKLK ++FLRKR N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG P
Sbjct: 50 NKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIP 109
Query: 362 PPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLE 505
PP+D LKP R + ++GRL+HE+GWKY+ V LE
Sbjct: 110 PPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLE 157
Score = 61.7 bits (143), Expect = 1e-09
Identities = 28/36 (77%), Positives = 32/36 (88%)
Frame = +1
Query: 70 GHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFF 177
GHLLGRLAA++AK +L G KVVVVRCE INISGNF+
Sbjct: 13 GHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFY 48
>BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 142 bits (345), Expect = 5e-34
Identities = 60/108 (55%), Positives = 78/108 (72%)
Frame = +2
Query: 182 NKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCP 361
NKLK ++FLRKR N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG P
Sbjct: 50 NKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIP 109
Query: 362 PPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLE 505
PP+D LKP R + ++GRL+HE+GWKY+ V LE
Sbjct: 110 PPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLE 157
Score = 61.7 bits (143), Expect = 1e-09
Identities = 28/36 (77%), Positives = 32/36 (88%)
Frame = +1
Query: 70 GHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFF 177
GHLLGRLAA++AK +L G KVVVVRCE INISGNF+
Sbjct: 13 GHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFY 48
>BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 142 bits (345), Expect = 5e-34
Identities = 60/108 (55%), Positives = 78/108 (72%)
Frame = +2
Query: 182 NKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCP 361
NKLK ++FLRKR N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG P
Sbjct: 50 NKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIP 109
Query: 362 PPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLE 505
PP+D LKP R + ++GRL+HE+GWKY+ V LE
Sbjct: 110 PPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLE 157
Score = 61.7 bits (143), Expect = 1e-09
Identities = 28/36 (77%), Positives = 32/36 (88%)
Frame = +1
Query: 70 GHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFF 177
GHLLGRLAA++AK +L G KVVVVRCE INISGNF+
Sbjct: 13 GHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFY 48
>BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein.
Length = 201
Score = 142 bits (345), Expect = 5e-34
Identities = 60/108 (55%), Positives = 78/108 (72%)
Frame = +2
Query: 182 NKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCP 361
NKLK ++FLRKR N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG P
Sbjct: 48 NKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIP 107
Query: 362 PPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLE 505
PP+D LKP R + ++GRL+HE+GWKY+ V LE
Sbjct: 108 PPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLE 155
Score = 61.7 bits (143), Expect = 1e-09
Identities = 28/36 (77%), Positives = 32/36 (88%)
Frame = +1
Query: 70 GHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFF 177
GHLLGRLAA++AK +L G KVVVVRCE INISGNF+
Sbjct: 11 GHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFY 46
>BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 142 bits (345), Expect = 5e-34
Identities = 60/108 (55%), Positives = 78/108 (72%)
Frame = +2
Query: 182 NKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCP 361
NKLK ++FLRKR N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG P
Sbjct: 50 NKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIP 109
Query: 362 PPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLE 505
PP+D LKP R + ++GRL+HE+GWKY+ V LE
Sbjct: 110 PPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLE 157
Score = 61.7 bits (143), Expect = 1e-09
Identities = 28/36 (77%), Positives = 32/36 (88%)
Frame = +1
Query: 70 GHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFF 177
GHLLGRLAA++AK +L G KVVVVRCE INISGNF+
Sbjct: 13 GHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFY 48
>BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 142 bits (345), Expect = 5e-34
Identities = 60/108 (55%), Positives = 78/108 (72%)
Frame = +2
Query: 182 NKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCP 361
NKLK ++FLRKR N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG P
Sbjct: 50 NKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIP 109
Query: 362 PPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLE 505
PP+D LKP R + ++GRL+HE+GWKY+ V LE
Sbjct: 110 PPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLE 157
Score = 61.7 bits (143), Expect = 1e-09
Identities = 28/36 (77%), Positives = 32/36 (88%)
Frame = +1
Query: 70 GHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFF 177
GHLLGRLAA++AK +L G KVVVVRCE INISGNF+
Sbjct: 13 GHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFY 48
>BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 142 bits (345), Expect = 5e-34
Identities = 60/108 (55%), Positives = 78/108 (72%)
Frame = +2
Query: 182 NKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCP 361
NKLK ++FLRKR N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG P
Sbjct: 50 NKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIP 109
Query: 362 PPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLE 505
PP+D LKP R + ++GRL+HE+GWKY+ V LE
Sbjct: 110 PPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLE 157
Score = 61.7 bits (143), Expect = 1e-09
Identities = 28/36 (77%), Positives = 32/36 (88%)
Frame = +1
Query: 70 GHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFF 177
GHLLGRLAA++AK +L G KVVVVRCE INISGNF+
Sbjct: 13 GHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFY 48
>AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 142 bits (345), Expect = 5e-34
Identities = 60/108 (55%), Positives = 78/108 (72%)
Frame = +2
Query: 182 NKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCP 361
NKLK ++FLRKR N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG P
Sbjct: 50 NKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIP 109
Query: 362 PPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLE 505
PP+D LKP R + ++GRL+HE+GWKY+ V LE
Sbjct: 110 PPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLE 157
Score = 61.7 bits (143), Expect = 1e-09
Identities = 28/36 (77%), Positives = 32/36 (88%)
Frame = +1
Query: 70 GHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFF 177
GHLLGRLAA++AK +L G KVVVVRCE INISGNF+
Sbjct: 13 GHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFY 48
>AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a
variant protein.
Length = 203
Score = 140 bits (340), Expect = 2e-33
Identities = 59/108 (54%), Positives = 77/108 (71%)
Frame = +2
Query: 182 NKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCP 361
NKLK ++FLRKR N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL L+ +DG P
Sbjct: 50 NKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDHLKVFDGIP 109
Query: 362 PPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLE 505
PP+D LKP R + ++GRL+HE+GWKY+ V LE
Sbjct: 110 PPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLE 157
Score = 61.7 bits (143), Expect = 1e-09
Identities = 28/36 (77%), Positives = 32/36 (88%)
Frame = +1
Query: 70 GHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFF 177
GHLLGRLAA++AK +L G KVVVVRCE INISGNF+
Sbjct: 13 GHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFY 48
>AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA
sequence from clone RP11-365K22 on chromosome 13
Contains a novel gene similar to ribosomal protein L13a
(RPL13A). ).
Length = 203
Score = 136 bits (329), Expect = 4e-32
Identities = 57/108 (52%), Positives = 76/108 (70%)
Frame = +2
Query: 182 NKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCP 361
NKL ++FLRKR N +P+RGP+HFRAPS++ W+TVRGM+PHKT+RG+ AL RL+ DG P
Sbjct: 50 NKLNYLAFLRKRMNTSPSRGPYHFRAPSRVFWRTVRGMLPHKTKRGQAALDRLKVSDGIP 109
Query: 362 PPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLE 505
PP+D LKP R + ++GRL+HE+GWKY+ V LE
Sbjct: 110 PPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLE 157
Score = 58.4 bits (135), Expect = 1e-08
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = +1
Query: 70 GHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFF 177
GHLLGRLAA++AK +L G KVVVV CE INISGNF+
Sbjct: 13 GHLLGRLAAIVAKQVLLGRKVVVVCCEGINISGNFY 48
>BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein.
Length = 142
Score = 124 bits (299), Expect = 2e-28
Identities = 51/95 (53%), Positives = 67/95 (70%)
Frame = +2
Query: 221 NVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXX 400
N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 2 NTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPA 61
Query: 401 XXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLE 505
LKP R + ++GRL+HE+GWKY+ V LE
Sbjct: 62 ALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLE 96
>AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a
protein.
Length = 142
Score = 124 bits (299), Expect = 2e-28
Identities = 51/95 (53%), Positives = 67/95 (70%)
Frame = +2
Query: 221 NVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXX 400
N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 2 NTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPA 61
Query: 401 XXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLE 505
LKP R + ++GRL+HE+GWKY+ V LE
Sbjct: 62 ALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLE 96
>BC067891-1|AAH67891.1| 102|Homo sapiens Unknown (protein for
MGC:87657) protein.
Length = 102
Score = 58.8 bits (136), Expect = 1e-08
Identities = 27/71 (38%), Positives = 38/71 (53%)
Frame = +2
Query: 293 MIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIG 472
M+ HKT+RG +L L+ +DG PPP+D LKP R + +GR + E+
Sbjct: 1 MLRHKTKRGHASLDCLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFALLGRQAQEVR 60
Query: 473 WKYRDVVRKLE 505
WKY+ V LE
Sbjct: 61 WKYQAVTATLE 71
>BC130622-1|AAI30623.1| 756|Homo sapiens
deoxynucleotidyltransferase, terminal, interacting
protein 2 protein.
Length = 756
Score = 30.3 bits (65), Expect = 4.1
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = -1
Query: 150 FAANHNNFVPFEKDLGDDCRQTAQQMTTGHRSLWP 46
FAAN P E G D R TA+ TTG +SL P
Sbjct: 26 FAANGIQAHP-ESSTGSDARTTAESQTTGKQSLIP 59
>BC047688-1|AAH47688.1| 523|Homo sapiens DNTTIP2 protein protein.
Length = 523
Score = 30.3 bits (65), Expect = 4.1
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = -1
Query: 150 FAANHNNFVPFEKDLGDDCRQTAQQMTTGHRSLWP 46
FAAN P E G D R TA+ TTG +SL P
Sbjct: 26 FAANGIQAHP-ESSTGSDARTTAESQTTGKQSLIP 59
>AY336729-1|AAR02407.1| 756|Homo sapiens LPTS-RP2 protein.
Length = 756
Score = 30.3 bits (65), Expect = 4.1
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = -1
Query: 150 FAANHNNFVPFEKDLGDDCRQTAQQMTTGHRSLWP 46
FAAN P E G D R TA+ TTG +SL P
Sbjct: 26 FAANGIQAHP-ESSTGSDARTTAESQTTGKQSLIP 59
>AL049796-1|CAI21812.1| 810|Homo sapiens acidic 82 kDa protein mRNA
(HSU15552) protein.
Length = 810
Score = 30.3 bits (65), Expect = 4.1
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = -1
Query: 150 FAANHNNFVPFEKDLGDDCRQTAQQMTTGHRSLWP 46
FAAN P E G D R TA+ TTG +SL P
Sbjct: 26 FAANGIQAHP-ESSTGSDARTTAESQTTGKQSLIP 59
>AK222722-1|BAD96442.1| 756|Homo sapiens estrogen receptor binding
protein variant protein.
Length = 756
Score = 30.3 bits (65), Expect = 4.1
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = -1
Query: 150 FAANHNNFVPFEKDLGDDCRQTAQQMTTGHRSLWP 46
FAAN P E G D R TA+ TTG +SL P
Sbjct: 26 FAANGIQAHP-ESSTGSDARTTAESQTTGKQSLIP 59
>AB046574-1|BAD08331.1| 756|Homo sapiens TdT interacting factor 2
protein.
Length = 756
Score = 30.3 bits (65), Expect = 4.1
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = -1
Query: 150 FAANHNNFVPFEKDLGDDCRQTAQQMTTGHRSLWP 46
FAAN P E G D R TA+ TTG +SL P
Sbjct: 26 FAANGIQAHP-ESSTGSDARTTAESQTTGKQSLIP 59
>U36619-1|AAC16921.1| 176|Homo sapiens Y-chromosome RNA recognition
motif protein protein.
Length = 176
Score = 29.1 bits (62), Expect = 9.4
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 45 KAIVIDGLWSSAGPSGGSHRQGPSRREQSCCGSLRT 152
K I ++ + PSGG R PS R +S GSLR+
Sbjct: 71 KEIKVEQAKKPSFPSGGRRRPPPSSRNRSPSGSLRS 106
>AF026564-1|AAC16916.1| 318|Homo sapiens RNA binding protein
protein.
Length = 318
Score = 29.1 bits (62), Expect = 9.4
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 45 KAIVIDGLWSSAGPSGGSHRQGPSRREQSCCGSLRT 152
K I ++ + PSGG R PS R +S GSLR+
Sbjct: 76 KEIKVEQAKKPSFPSGGRRRPPPSSRNRSPSGSLRS 111
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,890,909
Number of Sequences: 237096
Number of extensions: 1767256
Number of successful extensions: 10893
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 10835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10893
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4763295768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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