Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_G06
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1445 - 33658355-33658417,33658536-33658669,33659056-336591... 67 7e-12
02_05_0661 - 30693701-30693853,30694037-30694196,30694290-306943... 65 3e-11
03_02_0210 - 6425708-6425863,6425955-6426114,6426204-6426295,642... 61 5e-10
03_05_0899 - 28619081-28619208,28619309-28619369,28619936-286200... 42 4e-04
01_05_0006 + 17008799-17009417,17010035-17010162,17010425-170106... 29 2.3
01_01_0307 + 2513678-2513772,2514064-2514682 29 2.3
09_06_0151 - 21237677-21237704,21237759-21237829,21238101-212382... 28 4.0
06_01_0370 - 2660569-2661591,2661685-2662260 28 5.2
01_05_0714 + 24555494-24555637,24555884-24556071,24556195-245562... 28 5.2
09_02_0469 - 9610883-9611338,9611749-9611871,9612199-9612375,961... 27 6.9
05_01_0015 + 117238-117996 27 6.9
04_01_0505 + 6599181-6599249,6599537-6599632,6599931-6599962,660... 27 6.9
04_04_0781 - 28034978-28036615 27 9.1
01_06_0393 + 28968873-28968918,28969048-28969084,28969165-289693... 27 9.1
>04_04_1445 - 33658355-33658417,33658536-33658669,33659056-33659116,
33659197-33659356,33660032-33660081,33662237-33662290,
33662630-33662704,33662821-33662949,33663065-33663152,
33663266-33663372,33663513-33663561,33663657-33663760,
33663941-33663980,33664409-33664659,33664674-33664686,
33665846-33666355,33666437-33667657,33667973-33668221,
33668305-33668531
Length = 1194
Score = 67.3 bits (157), Expect = 7e-12
Identities = 34/81 (41%), Positives = 46/81 (56%)
Frame = +3
Query: 201 VLTNSPNAVLSKTLLSRYNDLPLPADKILATYIWIDGSGEHLRCKDRTLNFIPKAPKDLP 380
V T + V L + P DKI+A YIW+ G+G LR K RT++ + P +LP
Sbjct: 792 VSTETTGVVTRMEQLLNMDTTPF-TDKIIAEYIWVGGTGIDLRSKSRTISKPVEDPSELP 850
Query: 381 IWNFDGSSTNQADGHNSDTYL 443
WN+DGSST QA G +S+ L
Sbjct: 851 KWNYDGSSTGQAPGEDSEVIL 871
Score = 34.3 bits (75), Expect = 0.060
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = +1
Query: 361 KLPKICLYGTSMAAQPTKLMGTILIPTSXPRAIYKDPFRRGNHILV 498
+LPK G+S P + IL P +AI+KDPFR GN+ILV
Sbjct: 848 ELPKWNYDGSSTGQAPGEDSEVILYP----QAIFKDPFRGGNNILV 889
>02_05_0661 -
30693701-30693853,30694037-30694196,30694290-30694381,
30694469-30694543,30694671-30694799,30694916-30695003,
30695118-30695224,30695645-30695693,30695802-30695905,
30696108-30696147,30696838-30696911
Length = 356
Score = 65.3 bits (152), Expect = 3e-11
Identities = 31/56 (55%), Positives = 37/56 (66%)
Frame = +3
Query: 276 DKILATYIWIDGSGEHLRCKDRTLNFIPKAPKDLPIWNFDGSSTNQADGHNSDTYL 443
+KI+A YIWI GSG LR K RTL+ P LP WN+DGSST QA G +S+ L
Sbjct: 17 EKIIAEYIWIGGSGMDLRSKARTLSGPVTDPSKLPKWNYDGSSTGQAPGEDSEVIL 72
Score = 37.5 bits (83), Expect = 0.006
Identities = 22/46 (47%), Positives = 28/46 (60%)
Frame = +1
Query: 361 KLPKICLYGTSMAAQPTKLMGTILIPTSXPRAIYKDPFRRGNHILV 498
KLPK G+S P + IL P +AI+KDPFR+GN+ILV
Sbjct: 49 KLPKWNYDGSSTGQAPGEDSEVILYP----QAIFKDPFRKGNNILV 90
>03_02_0210 -
6425708-6425863,6425955-6426114,6426204-6426295,
6426490-6426564,6426701-6426829,6427312-6427375,
6427761-6427867,6428795-6428843,6428955-6429058,
6429166-6429205,6429492-6429565
Length = 349
Score = 61.3 bits (142), Expect = 5e-10
Identities = 29/57 (50%), Positives = 36/57 (63%)
Frame = +3
Query: 273 ADKILATYIWIDGSGEHLRCKDRTLNFIPKAPKDLPIWNFDGSSTNQADGHNSDTYL 443
+DKI+A YIW+ GSG LR K RT+ LP WN+DGSST QA G +S+ L
Sbjct: 16 SDKIIAEYIWVGGSGIDLRSKARTVKGPITDVSQLPKWNYDGSSTGQAPGEDSEVIL 72
Score = 35.1 bits (77), Expect = 0.034
Identities = 21/46 (45%), Positives = 28/46 (60%)
Frame = +1
Query: 361 KLPKICLYGTSMAAQPTKLMGTILIPTSXPRAIYKDPFRRGNHILV 498
+LPK G+S P + IL P +AI+KDPFRRG++ILV
Sbjct: 49 QLPKWNYDGSSTGQAPGEDSEVILYP----QAIFKDPFRRGDNILV 90
>03_05_0899 -
28619081-28619208,28619309-28619369,28619936-28620095,
28620200-28620237,28620341-28620394,28620562-28620636,
28620744-28620872,28621172-28621259,28621340-28621446,
28621547-28621595,28621683-28621786,28622019-28622133,
28622517-28622596
Length = 395
Score = 41.5 bits (93), Expect = 4e-04
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = +3
Query: 321 HLRCKDRTLNFIPKAPKDLPIWNFDGSSTNQADGHNSDTYL 443
HL+ + TL+ P LP WNFDGSST QA G +S+ L
Sbjct: 59 HLKEVNHTLSGPVDDPSKLPKWNFDGSSTGQATGDDSEVIL 99
Score = 31.5 bits (68), Expect = 0.42
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +1
Query: 361 KLPKICLYGTSMAAQPTKLMGTILIPTSXPRAIYKDPFRRGNHILV 498
KLPK G+S Q T +++ P+AI++DPFR+G +ILV
Sbjct: 76 KLPKWNFDGSS-TGQATGDDSEVIL---HPQAIFRDPFRKGKNILV 117
>01_05_0006 +
17008799-17009417,17010035-17010162,17010425-17010650,
17010792-17010925,17010988-17011161,17011234-17012238
Length = 761
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -2
Query: 289 ARILSAGSGRSLYRLSSVLDSTAFGELVKTGPDR 188
AR L +LY SS+LD + GEL++ PDR
Sbjct: 553 ARDLDPSQTSTLYCQSSLLDKSENGELIEMYPDR 586
>01_01_0307 + 2513678-2513772,2514064-2514682
Length = 237
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = -1
Query: 170 YFGMRCISHFETGKAR--LCLEMFPRCEC*ILRENV 69
Y CISHF KAR LC E +P C I+ + V
Sbjct: 195 YRTQNCISHFLANKARAKLCTEFWPDETCNIISQFV 230
>09_06_0151 -
21237677-21237704,21237759-21237829,21238101-21238281,
21238369-21238441,21239033-21239072,21239818-21239890,
21240075-21240151,21241033-21241138,21241256-21241278,
21241369-21241440
Length = 247
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 391 SMAAQPTKLMGTILIPTSXPRAIYKD 468
S A+ PT + I IP S P A+Y+D
Sbjct: 174 SYASYPTNQVSRISIPNSAPSAVYED 199
>06_01_0370 - 2660569-2661591,2661685-2662260
Length = 532
Score = 27.9 bits (59), Expect = 5.2
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = -2
Query: 289 ARILSAGSGRSLYRLSSVLDS--TAFGELVKTGPDRIFGLSSILVCAVSAILKQVRHDYV 116
A + GS S+Y+ + D A LVKT PD G L+ + AIL ++RHD++
Sbjct: 219 ANEIGRGSSGSVYK-GRLRDGREVAIKSLVKTSPDH--GREESLMRGL-AILSRLRHDHI 274
Query: 115 LK 110
++
Sbjct: 275 VR 276
>01_05_0714 +
24555494-24555637,24555884-24556071,24556195-24556280,
24556359-24556461,24556798-24557000,24557077-24557681,
24557784-24557918,24558040-24558067,24559517-24559596,
24559873-24559975,24560553-24560635,24560915-24561017,
24561596-24561720,24562001-24562103,24562647-24562726,
24563322-24563429,24563521-24563565
Length = 773
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 16 PPREAIETFYAPTKPFVNTFSRNIQHSHRGNISR 117
PP + T + P P +T+ +N HRGN +
Sbjct: 630 PPEDTDNTVHTPEIPPEDTYPQNQSEIHRGNTEK 663
>09_02_0469 -
9610883-9611338,9611749-9611871,9612199-9612375,
9614416-9614501,9615519-9615678,9616122-9617438,
9619463-9620428,9621452-9621766
Length = 1199
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -3
Query: 510 VSHINEDVISSTEWILVNSTRXRGRYQNC-AHQLGWLSCHRSS 385
+SH+NED I E ++ S+ RG Q +QL S H SS
Sbjct: 850 ISHLNEDRIEEPE-VVTESSATRGMVQQIPGNQLSSPSSHLSS 891
>05_01_0015 + 117238-117996
Length = 252
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -1
Query: 170 YFGMRCISHFETGKARLCLEMFPRCEC*ILRENVFTKGFV 51
YFG+ SH AR+ LE+ RC +L E+ G +
Sbjct: 146 YFGIGKQSHRSLDDARMNLEVLKRCATLLLLESTLPPGML 185
>04_01_0505 +
6599181-6599249,6599537-6599632,6599931-6599962,
6601191-6601428,6601852-6601905,6601923-6602130,
6602353-6602590,6602788-6602962,6603074-6603442
Length = 492
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +3
Query: 30 DRNILRSDKTFRKYVFAQYSTLASREHFKT*SCLTCFKMADTAHTKIEDN 179
D + R+ K+ R + +Y +LAS + + SC+ F ++D + EDN
Sbjct: 61 DNDTTRNFKSIRLWKCNKYQSLASASYVPSHSCVYIFFLSDNTGNE-EDN 109
>04_04_0781 - 28034978-28036615
Length = 545
Score = 27.1 bits (57), Expect = 9.1
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 474 EWILVNSTRXRGRYQNC 424
EWI N R RG YQ C
Sbjct: 51 EWIAANLRRTRGTYQTC 67
>01_06_0393 +
28968873-28968918,28969048-28969084,28969165-28969384,
28969557-28969715,28969831-28969950,28972154-28972240,
28972329-28972418,28972516-28972602,28972761-28972877,
28972945-28973028,28973585-28975324,28975670-28975816,
28975998-28976431,28976523-28976667
Length = 1170
Score = 27.1 bits (57), Expect = 9.1
Identities = 18/53 (33%), Positives = 22/53 (41%)
Frame = +3
Query: 294 YIWIDGSGEHLRCKDRTLNFIPKAPKDLPIWNFDGSSTNQADGHNSDTYLXTS 452
Y W DG L D+ +PK + L +NF A GHN L TS
Sbjct: 663 YTWGDGDKNRLGHGDKEPRLVPKCVQALLEYNFH----QLACGHNMTVALATS 711
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,359,715
Number of Sequences: 37544
Number of extensions: 339031
Number of successful extensions: 868
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 868
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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