Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_G06
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82259-3|CAB05127.1|  368|Caenorhabditis elegans Hypothetical pr...    89   2e-18
Z80223-3|CAB02317.1|  369|Caenorhabditis elegans Hypothetical pr...    84   5e-17
Z29560-1|CAA82655.1|  367|Caenorhabditis elegans Hypothetical pr...    82   2e-16
AL110479-26|CAB54376.1|  385|Caenorhabditis elegans Hypothetical...    82   3e-16
AL110479-25|CAB60321.1|  388|Caenorhabditis elegans Hypothetical...    82   3e-16
AC006618-2|AAK68249.1|  340|Caenorhabditis elegans Glutamine syn...    72   3e-13
U70844-4|AAB09095.2| 1105|Caenorhabditis elegans Hypothetical pr...    28   4.7  

>Z82259-3|CAB05127.1|  368|Caenorhabditis elegans Hypothetical
           protein C28D4.3 protein.
          Length = 368

 Score = 88.6 bits (210), Expect = 2e-18
 Identities = 39/72 (54%), Positives = 48/72 (66%)
 Frame = +3

Query: 228 LSKTLLSRYNDLPLPADKILATYIWIDGSGEHLRCKDRTLNFIPKAPKDLPIWNFDGSST 407
           L +  +  +  LP    K  ATY+WIDG+GEHLR K RT+N  P+   + PIWN+DGSST
Sbjct: 12  LGQATIDHFMGLPAHPTKCQATYVWIDGTGEHLRAKTRTINTKPQYLSEYPIWNYDGSST 71

Query: 408 NQADGHNSDTYL 443
            QADG NSD YL
Sbjct: 72  GQADGLNSDRYL 83


>Z80223-3|CAB02317.1|  369|Caenorhabditis elegans Hypothetical
           protein F26D10.10 protein.
          Length = 369

 Score = 84.2 bits (199), Expect = 5e-17
 Identities = 37/72 (51%), Positives = 46/72 (63%)
 Frame = +3

Query: 228 LSKTLLSRYNDLPLPADKILATYIWIDGSGEHLRCKDRTLNFIPKAPKDLPIWNFDGSST 407
           L +  +  +  LP    K  ATY+WIDG+GE LR K RT N  P+   + PIWN+DGSST
Sbjct: 12  LGQATIDHFMGLPAHPSKCQATYVWIDGTGEQLRAKTRTFNLKPQYLSEYPIWNYDGSST 71

Query: 408 NQADGHNSDTYL 443
            QA+G NSD YL
Sbjct: 72  GQAEGLNSDRYL 83


>Z29560-1|CAA82655.1|  367|Caenorhabditis elegans Hypothetical
           protein K03H1.1 protein.
          Length = 367

 Score = 82.2 bits (194), Expect = 2e-16
 Identities = 37/72 (51%), Positives = 49/72 (68%)
 Frame = +3

Query: 228 LSKTLLSRYNDLPLPADKILATYIWIDGSGEHLRCKDRTLNFIPKAPKDLPIWNFDGSST 407
           L   ++ ++  L     KI ATY+WIDG+GE+LR K RT + +PK  +D PIWN+DGSST
Sbjct: 12  LGTAVIDQFLGLRPHPTKIQATYVWIDGTGENLRSKTRTFDKLPKRIEDYPIWNYDGSST 71

Query: 408 NQADGHNSDTYL 443
            QA G +SD YL
Sbjct: 72  GQAKGRDSDRYL 83


>AL110479-26|CAB54376.1|  385|Caenorhabditis elegans Hypothetical
           protein Y105C5B.28b protein.
          Length = 385

 Score = 81.8 bits (193), Expect = 3e-16
 Identities = 35/52 (67%), Positives = 41/52 (78%)
 Frame = +3

Query: 288 ATYIWIDGSGEHLRCKDRTLNFIPKAPKDLPIWNFDGSSTNQADGHNSDTYL 443
           A YIWIDGSGE++R K RT +F P  P+ LPIWNFDGSST QA+G +SD YL
Sbjct: 30  ALYIWIDGSGENIRAKTRTFDFEPTDPEKLPIWNFDGSSTGQAEGADSDVYL 81


>AL110479-25|CAB60321.1|  388|Caenorhabditis elegans Hypothetical
           protein Y105C5B.28a protein.
          Length = 388

 Score = 81.8 bits (193), Expect = 3e-16
 Identities = 35/52 (67%), Positives = 41/52 (78%)
 Frame = +3

Query: 288 ATYIWIDGSGEHLRCKDRTLNFIPKAPKDLPIWNFDGSSTNQADGHNSDTYL 443
           A YIWIDGSGE++R K RT +F P  P+ LPIWNFDGSST QA+G +SD YL
Sbjct: 33  ALYIWIDGSGENIRAKTRTFDFEPTDPEKLPIWNFDGSSTGQAEGADSDVYL 84


>AC006618-2|AAK68249.1|  340|Caenorhabditis elegans Glutamine
           synthetase (glutamate-ammonia ligase) protein 1 protein.
          Length = 340

 Score = 71.7 bits (168), Expect = 3e-13
 Identities = 29/50 (58%), Positives = 37/50 (74%)
 Frame = +3

Query: 294 YIWIDGSGEHLRCKDRTLNFIPKAPKDLPIWNFDGSSTNQADGHNSDTYL 443
           YIWID + E++R K +T +F PK P DLPIWNFDG+ST Q+ G  SD Y+
Sbjct: 35  YIWIDATQENMRGKTKTFDFEPKTPSDLPIWNFDGTSTGQSLGEGSDVYI 84


>U70844-4|AAB09095.2| 1105|Caenorhabditis elegans Hypothetical
           protein ZK154.5 protein.
          Length = 1105

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 12/44 (27%), Positives = 21/44 (47%)
 Frame = +3

Query: 141 KMADTAHTKIEDNPKILSGPVLTNSPNAVLSKTLLSRYNDLPLP 272
           K  +  HT  E  P+IL  P++ + P  +      + +N+L  P
Sbjct: 375 KQEEQEHTNGEKKPEILDEPIIQDEPRTMRPHEHCAIFNNLSTP 418


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,908,872
Number of Sequences: 27780
Number of extensions: 280905
Number of successful extensions: 720
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 720
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)