Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_G05
         (655 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   6.0  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   6.0  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   7.9  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    21   7.9  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   7.9  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/57 (19%), Positives = 28/57 (49%)
 Frame = +2

Query: 479 LFDNYHKNVIRPEFVTPNEETEQTTYINTILATGPIRSLITFLVNKGITQLNEYPEQ 649
           +FD+  +  +RP +++P     Q      ++A   + +L+  ++    T+   YP++
Sbjct: 608 IFDSASRTAVRPRYISP---ASQVCIAAALIALQIVLTLVWMIIEPPGTRF-FYPDR 660


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/57 (19%), Positives = 28/57 (49%)
 Frame = +2

Query: 479 LFDNYHKNVIRPEFVTPNEETEQTTYINTILATGPIRSLITFLVNKGITQLNEYPEQ 649
           +FD+  +  +RP +++P     Q      ++A   + +L+  ++    T+   YP++
Sbjct: 698 IFDSASRTAVRPRYISP---ASQVCIAAALIALQIVLTLVWMIIEPPGTRF-FYPDR 750


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +2

Query: 80  GVCHADD 100
           GVCHADD
Sbjct: 461 GVCHADD 467


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = +2

Query: 236 YAKKKSY-EDLLRQAQDSTTDDDLLRVSEEMFNADINNA 349
           +A  + Y +D    A    T +DLL    +M+   +NNA
Sbjct: 436 FANNQPYTKDSYTVAGMGETIEDLLHFCRQMYAMKVNNA 474


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +2

Query: 80  GVCHADD 100
           GVCHADD
Sbjct: 461 GVCHADD 467


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,581
Number of Sequences: 438
Number of extensions: 3749
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)