Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_G05
(655 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g49040.2 68414.m05499 stomatal cytokinesis defective / SCD1 p... 32 0.38
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 32 0.38
At1g62950.1 68414.m07108 leucine-rich repeat transmembrane prote... 30 1.2
At5g17000.1 68418.m01991 NADP-dependent oxidoreductase, putative... 29 2.0
At4g28480.1 68417.m04074 DNAJ heat shock family protein contains... 29 2.0
At5g61480.1 68418.m07714 leucine-rich repeat transmembrane prote... 29 2.7
At4g31560.1 68417.m04482 expressed protein 29 2.7
At4g14160.2 68417.m02186 transport protein, putative similar to ... 29 3.6
At1g12460.1 68414.m01440 leucine-rich repeat transmembrane prote... 29 3.6
At1g12970.1 68414.m01506 leucine-rich repeat family protein 28 4.7
At5g43935.1 68418.m05375 flavonol synthase, putative similar to ... 28 6.2
At5g60090.1 68418.m07534 protein kinase family protein contains ... 27 8.2
At2g16140.1 68415.m01850 expressed protein contains similarity t... 27 8.2
At1g69780.1 68414.m08029 homeobox-leucine zipper protein 13 (HB-... 27 8.2
At1g68400.1 68414.m07814 leucine-rich repeat transmembrane prote... 27 8.2
>At1g49040.2 68414.m05499 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 909
Score = 31.9 bits (69), Expect = 0.38
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2
Query: 281 DSTTDDDLLRVSEEMFNADINNAFNYIQVNL 373
D +T D L VS EMF D NN +Y+Q +L
Sbjct: 633 DLSTVRDALEVSAEMFKKDANNVSDYVQRHL 663
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 31.9 bits (69), Expect = 0.38
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2
Query: 281 DSTTDDDLLRVSEEMFNADINNAFNYIQVNL 373
D +T D L VS EMF D NN +Y+Q +L
Sbjct: 633 DLSTVRDALEVSAEMFKKDANNVSDYVQRHL 663
>At1g62950.1 68414.m07108 leucine-rich repeat transmembrane protein
kinase, putative contains protein kinase domains
Length = 890
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +2
Query: 260 DLLRQAQDSTTDDDLLRVSEEMFNADINNAFNYIQVNLQG 379
++L Q +D+ DD ++ + NAD+ N+FN + N +G
Sbjct: 34 EILLQFKDNINDDPYNSLASWVSNADLCNSFNGVSCNQEG 73
>At5g17000.1 68418.m01991 NADP-dependent oxidoreductase, putative
strong similarity to probable NADP-dependent
oxidoreductase (zeta-crystallin homolog) P1
[SP|Q39172][gi:886428] and P2 [SP|Q39173][gi:886430],
Arabidopsis thaliana
Length = 345
Score = 29.5 bits (63), Expect = 2.0
Identities = 32/154 (20%), Positives = 65/154 (42%), Gaps = 1/154 (0%)
Frame = +2
Query: 110 AAGQIFNNILPNLISNHVTGQQGNTAQNTFQQIGTVVGGVVDYAKKKSYEDLLRQAQDST 289
A GQ+ ++ +V G G+T + + +Y ++ L++ +
Sbjct: 167 AVGQLVGQFA-KMMGCYVVGSAGSTEKVDLLKTKFGFDDAFNYKEEPDLSAALKRCFPTG 225
Query: 290 TDDDLLRVSEEMFNADINNAFNYIQVNLQGKTTPMS-RNDEAQSNLLNVPENVWSGPTIR 466
D V +M +A + N + ++ + G + + N E NL N+ ++ I+
Sbjct: 226 IDIYFENVGGKMLDAVLLNMNPHGRIAVCGMISQYNLENQEGVHNLSNI---IYKRIRIQ 282
Query: 467 PFVALFDNYHKNVIRPEFVTPNEETEQTTYINTI 568
F A+FD Y K +FV P+ + + TY+ +
Sbjct: 283 GF-AVFDFYEKYSKFLDFVLPHIKEGKITYVEDV 315
>At4g28480.1 68417.m04074 DNAJ heat shock family protein contains
Pfam profile PF00226: DnaJ domain; ; similar to DnaJ
homolog subfamily B member 1 (Heat shock 40 kDa protein
1) (Heat shock protein 40) (HSP40) (DnaJ protein homolog
1) (HDJ-1) (Swiss-Prot:P25685) [Homo sapiens] and
(Swiss-Prot:Q9QYJ3) [Mus musculus]
Length = 348
Score = 29.5 bits (63), Expect = 2.0
Identities = 20/89 (22%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = +2
Query: 302 LLRVSEEMFNADINNAFNYIQVNLQGKTTPMSRND-EAQSNLLNVPENVWSGPTIRPFVA 478
+L+V + D+ A+ + + P ++ D EA+ ++ +V S P R A
Sbjct: 8 VLQVDRSANDDDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR---A 64
Query: 479 LFDNYHKNVIRPEFVTPNEETEQTTYINT 565
++D Y + ++ PN T +Y +T
Sbjct: 65 VYDQYGEEGLKGNVPPPNAATSGASYFST 93
>At5g61480.1 68418.m07714 leucine-rich repeat transmembrane protein
kinase, putative
Length = 1041
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 341 NNAFNYIQVNLQGKTTPMSRNDEAQSNLLN--VPENVWSGPTIRPFVALFDN 490
NN F Q+ T P+ + +N + +PEN+W P ++ F A F N
Sbjct: 450 NNRFTD-QIPADFATAPVLQYLNLSTNFFHRKLPENIWKAPNLQIFSASFSN 500
>At4g31560.1 68417.m04482 expressed protein
Length = 137
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/57 (28%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = -1
Query: 280 LCLAQQIFVALLLRIVNDTTNN--CAYLLESVLSCVALLTSHMIADQVGKDVVEDLA 116
LCL ++I + ++ +T++ A+ + + L + TS IAD++ +D +ED+A
Sbjct: 41 LCLTRRIRDSSVVTRAGPSTSSYLLAFAIPATLIAATVFTSIKIADKLDEDFLEDIA 97
>At4g14160.2 68417.m02186 transport protein, putative similar to
Swiss-Prot:Q15436 protein transport protein Sec23A [Homo
sapiens]
Length = 772
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 458 TIRPFVALFDNYHKNVIRPEFVTP-NEETEQTTYINTILATGPIRSLITFL 607
T++P++ LF + N+ R +FV N ++T Y +L I + I +
Sbjct: 579 TLKPYLTLFPQFMFNLRRSQFVQVFNNSPDETAYFRMLLNRENISNAIVMI 629
>At1g12460.1 68414.m01440 leucine-rich repeat transmembrane protein
kinase, putative
Length = 882
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +2
Query: 251 SYEDLLRQAQDSTTDDDLLRVSEEMFNADINNAFNYIQVNLQG 379
S D+L Q + S +DD ++ + + D+ N+FN I N QG
Sbjct: 25 SERDILLQFKGSISDDPYNSLASWVSDGDLCNSFNGITCNPQG 67
>At1g12970.1 68414.m01506 leucine-rich repeat family protein
Length = 464
Score = 28.3 bits (60), Expect = 4.7
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -1
Query: 319 LANSEEV-IVGRRILCLAQQIFVALLLRIVNDTTNNCAYLLESVLSCVALL 170
L EE+ + R++ L I + L LRI+N T N L ES+ C +L+
Sbjct: 206 LEKLEELDLSSNRLVFLPDSIGLLLNLRILNVTGNKLTLLPESIAQCRSLV 256
>At5g43935.1 68418.m05375 flavonol synthase, putative similar to
flavonol synthase from Arabidopsis thaliana [SP|Q96330],
Matthiola incana [SP|O04395]; contains Pfam profile
PF03171 2OG-Fe(II) oxygenase superfamily
Length = 293
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = -1
Query: 637 LIQLSNAFVD*ESNEAPDGSRSKNSVDVSGLFRFFIRRNKLWSDHIL 497
L ++ F + ++E +R +S D+ G F ++ K W DH++
Sbjct: 61 LQEVGRQFFELPASEKESVTRPADSQDIEGFFSKDPKKLKAWDDHLI 107
>At5g60090.1 68418.m07534 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 398
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -1
Query: 601 SNEAPDGSRSKNSVDVSGLFRFFIRRNKLWSDHI 500
S+ A G+ + VDV LF R N LW +H+
Sbjct: 13 SSNAAQGNDENDEVDVERLFGNNERLNHLWRNHL 46
>At2g16140.1 68415.m01850 expressed protein contains similarity to
hypothetical proteins
Length = 311
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/67 (25%), Positives = 29/67 (43%)
Frame = +2
Query: 152 SNHVTGQQGNTAQNTFQQIGTVVGGVVDYAKKKSYEDLLRQAQDSTTDDDLLRVSEEMFN 331
S + G + N Q+ + GV + SYE R+ D+D++ ++ E+FN
Sbjct: 101 SPQLNGLRKRMQGNIKQRWAKINDGVCKFVG--SYEAASREKSSGQNDNDVISLAHEIFN 158
Query: 332 ADINNAF 352
D F
Sbjct: 159 NDYGYKF 165
>At1g69780.1 68414.m08029 homeobox-leucine zipper protein 13 (HB-13)
/ HD-ZIP transcription factor 13 identical to homeobox
gene 13 protein (GP:12325190) [Arabidopsis thaliana]
Length = 294
Score = 27.5 bits (58), Expect = 8.2
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Frame = +2
Query: 245 KKSYEDLLRQAQDSTTDDDLLRVSEEMFNADINNAFNYIQ---VNLQGKT--TPMSRNDE 409
+K Y+ L RQ ++DLL+ + A+I N Q +NL +T + +R+D
Sbjct: 143 EKDYDTLKRQFDTLKAENDLLQTHNQKLQAEIMGLKNREQTESINLNKETEGSCSNRSDN 202
Query: 410 AQSNL 424
+ NL
Sbjct: 203 SSDNL 207
>At1g68400.1 68414.m07814 leucine-rich repeat transmembrane protein
kinase, putative similar to receptor kinase GB:AAA33715
from [Petunia integrifolia]
Length = 670
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 371 LQGKTTPMSRNDEAQSNLLNVPENVWSGPT 460
L T R DEA+++ LN PE V S PT
Sbjct: 229 LSSDPTKPGRPDEAKASPLNKPETVPSSPT 258
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,388,218
Number of Sequences: 28952
Number of extensions: 266605
Number of successful extensions: 701
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 701
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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