Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_G03
         (478 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0CYS2 Cluster: Chromosome undetermined scaffold_31, wh...    34   1.4  
UniRef50_Q5KQJ2 Cluster: Unknow protein; n=3; Oryza sativa|Rep: ...    32   7.5  

>UniRef50_A0CYS2 Cluster: Chromosome undetermined scaffold_31, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_31,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 2220

 Score = 34.3 bits (75), Expect = 1.4
 Identities = 17/47 (36%), Positives = 29/47 (61%)
 Frame = -2

Query: 204 MRYFRYGRHVSITCDIRYFVYYYFNEALLKVIYLSLISCARFKTITS 64
           + YF +G H+ I  + +YFVY  + + LL +I +S  +C +  +ITS
Sbjct: 73  LTYFLFGYHI-IYVEKQYFVYALYKQFLLIIIKISNKNCDQLLSITS 118


>UniRef50_Q5KQJ2 Cluster: Unknow protein; n=3; Oryza sativa|Rep:
           Unknow protein - Oryza sativa subsp. japonica (Rice)
          Length = 396

 Score = 31.9 bits (69), Expect = 7.5
 Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = -3

Query: 395 LRLPHRLTPRLEIPP-PHRIH*KSHKFHYLLRMHLIESMLSFKISISHT 252
           LR PHRL+P    PP PHR+  ++H      R      +LS  IS S T
Sbjct: 38  LRPPHRLSPFSAPPPEPHRLTYRTHSTSSSSRTPTAAGLLSPVISTSRT 86


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 404,273,965
Number of Sequences: 1657284
Number of extensions: 7460216
Number of successful extensions: 15588
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15581
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26870548160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)