Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_G01
         (657 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   1.7  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   1.7  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   2.2  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   2.2  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    23   2.2  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   3.9  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   6.7  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    21   6.7  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   6.7  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +2

Query: 575 NTPNMPYYMSNQNPYTGYGTQP 640
           +TP +P++  N NP T   ++P
Sbjct: 92  STPIVPHFAYNHNPLTPPNSEP 113


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/40 (27%), Positives = 16/40 (40%)
 Frame = +2

Query: 512 NQNPAPILTQNPNMGYGFPPLNTPNMPYYMSNQNPYTGYG 631
           N   +P   Q P      PP +  N P ++    PY+  G
Sbjct: 262 NNRASPYPMQRPKSASLSPPPHVYNPPDHIQQATPYSAPG 301


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 11/37 (29%), Positives = 15/37 (40%)
 Frame = +2

Query: 488 NPGVCPPANQNPAPILTQNPNMGYGFPPLNTPNMPYY 598
           +PG    +  +P      N N     P  N+P  PYY
Sbjct: 411 SPGSDQRSTPSPRVYGNVNENQDCSTPTENSPTKPYY 447


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
 Frame = +2

Query: 542 NPNMGYGFPPLNTPNMPYYMSNQNPYTGY-GTQP 640
           NP   Y +   N PN   Y+++QN   GY G  P
Sbjct: 354 NPQQQYYYNK-NHPNSENYINHQNYVQGYQGEHP 386


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
 Frame = +2

Query: 542 NPNMGYGFPPLNTPNMPYYMSNQNPYTGY-GTQP 640
           NP   Y +   N PN   Y+++QN   GY G  P
Sbjct: 302 NPQQQYYYNK-NHPNSENYINHQNYVQGYQGEHP 334


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = +2

Query: 503 PPANQNPAPILTQNPNMGYGFPPLNTPNMPYYMSNQNPYTGY 628
           P  N +  P  T   + G+  P       P+   +QN YTGY
Sbjct: 48  PAGNAHTGP--TGTHDAGFPSPRGALGAYPFRPMHQNSYTGY 87


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +1

Query: 370 VENRQKKPVEPVESFNAPTVPPLRQPKM 453
           V NR +KP + +   N+P    +R P++
Sbjct: 497 VLNRVRKPTKKLHLKNSPISKKVRPPQV 524


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 590 PYYMSNQNPYTGYGTQ 637
           PY  ++QNPY   G +
Sbjct: 13  PYPSTDQNPYPSIGVE 28


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/18 (33%), Positives = 10/18 (55%)
 Frame = -3

Query: 586 VWCVQRREAIAHIWILSK 533
           +W     + + H+W LSK
Sbjct: 1   MWSENITDVLKHVWFLSK 18


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,657
Number of Sequences: 336
Number of extensions: 3954
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)