Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_G01
(657 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK090863-1|BAC03533.1| 160|Homo sapiens protein ( Homo sapiens ... 34 0.51
Z99716-7|CAI41694.1| 309|Homo sapiens protein ( ry element bind... 31 3.6
CR456400-1|CAG30286.1| 309|Homo sapiens bK250D10.6 protein. 31 3.6
BC065297-1|AAH65297.1| 747|Homo sapiens mediator complex subuni... 31 3.6
BC022546-1|AAH22546.1| 309|Homo sapiens WBP2 N-terminal like pr... 31 3.6
AY533507-1|AAS45401.1| 796|Homo sapiens ARC/mediator transcript... 31 3.6
AJ617479-1|CAE84581.1| 754|Homo sapiens activator interaction d... 31 3.6
AF393575-1|AAQ02873.1| 235|Homo sapiens PAWP protein. 31 3.6
AF283769-1|AAG15589.1| 574|Homo sapiens protein ( Homo sapiens ... 31 3.6
AF261072-1|AAM20739.1| 747|Homo sapiens p78 protein. 31 3.6
Y08262-1|CAA69589.1| 914|Homo sapiens SCA2 protein. 30 6.3
U70323-1|AAB19200.1| 1312|Homo sapiens ataxin-2 protein. 30 6.3
BC114546-1|AAI14547.1| 1006|Homo sapiens ATXN2 protein protein. 30 6.3
BC111757-1|AAI11758.1| 1127|Homo sapiens ATXN2 protein protein. 30 6.3
BC063284-1|AAH63284.1| 797|Homo sapiens CAS1 domain containing ... 30 8.3
AK024866-1|BAB15028.1| 268|Homo sapiens protein ( Homo sapiens ... 30 8.3
AF397424-1|AAK97479.2| 797|Homo sapiens C7ORF12 protein. 30 8.3
AF355594-1|AAL33538.1| 797|Homo sapiens O-acetyltransferase pro... 30 8.3
AB073397-1|BAE45726.1| 463|Homo sapiens putative protein produc... 30 8.3
>AK090863-1|BAC03533.1| 160|Homo sapiens protein ( Homo sapiens
cDNA FLJ33544 fis, clone BRAMY2008333. ).
Length = 160
Score = 33.9 bits (74), Expect = 0.51
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Frame = +2
Query: 371 LKTDKRSPLNLLNRSMLQQFHHLGNLRCTPTIQQAMQPXNPGVCPPAN---QNPAPILTQ 541
L+ KR P R +L Q +L RC + + V PP++ Q+P P+L+
Sbjct: 23 LRASKRHPNLGCARQLLSQGENLQEARCKSQWRPHPEVSPLQVAPPSHATPQSPQPLLSV 82
Query: 542 NPNMGYGFPP-LNTP 583
P +G PP L++P
Sbjct: 83 GPRIGSPTPPRLSSP 97
>Z99716-7|CAI41694.1| 309|Homo sapiens protein ( ry element binding
transcription factosterol regulatory element binding
transcription factor 2).).
Length = 309
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +2
Query: 503 PPANQNPAPILTQNPNMGYGFPPLNTPNMPYYMSNQNPYTGYGTQP 640
PP +P+ P +GYG PP P + P GYGT P
Sbjct: 206 PPVGYRASPVRYGAPPLGYGAPPAGYGAPP--LGYGAPPLGYGTPP 249
Score = 31.1 bits (67), Expect = 3.6
Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 5/69 (7%)
Frame = +2
Query: 449 RCTPTIQQAMQPXNPGVCPPANQNPAPILTQNPNMGYGFPPL--NTPNMPY---YMSNQN 613
R +P ++ P G PPA P+ P +GYG PPL P + Y N+
Sbjct: 211 RASP-VRYGAPPLGYGA-PPAGYGAPPLGYGAPPLGYGTPPLGYGAPPLGYGAPPAGNEG 268
Query: 614 PYTGYGTQP 640
P GY P
Sbjct: 269 PPAGYRASP 277
>CR456400-1|CAG30286.1| 309|Homo sapiens bK250D10.6 protein.
Length = 309
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +2
Query: 503 PPANQNPAPILTQNPNMGYGFPPLNTPNMPYYMSNQNPYTGYGTQP 640
PP +P+ P +GYG PP P + P GYGT P
Sbjct: 206 PPVGYRASPVRYGAPPLGYGAPPAGYGAPP--LGYGAPPLGYGTPP 249
Score = 31.1 bits (67), Expect = 3.6
Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 5/69 (7%)
Frame = +2
Query: 449 RCTPTIQQAMQPXNPGVCPPANQNPAPILTQNPNMGYGFPPL--NTPNMPY---YMSNQN 613
R +P ++ P G PPA P+ P +GYG PPL P + Y N+
Sbjct: 211 RASP-VRYGAPPLGYGA-PPAGYGAPPLGYGAPPLGYGTPPLGYGAPPLGYGAPPAGNEG 268
Query: 614 PYTGYGTQP 640
P GY P
Sbjct: 269 PPAGYRASP 277
>BC065297-1|AAH65297.1| 747|Homo sapiens mediator complex subunit
25 protein.
Length = 747
Score = 31.1 bits (67), Expect = 3.6
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 476 MQPXNPGVCPPANQNPAPILTQNPNMGYGFPPLNTPNM 589
+Q PGV PP +Q PAP L P PP + P++
Sbjct: 309 LQQAAPGVGPPFSQAPAPQLPPGPPGAPKPPPASQPSL 346
>BC022546-1|AAH22546.1| 309|Homo sapiens WBP2 N-terminal like
protein.
Length = 309
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +2
Query: 503 PPANQNPAPILTQNPNMGYGFPPLNTPNMPYYMSNQNPYTGYGTQP 640
PP +P+ P +GYG PP P + P GYGT P
Sbjct: 206 PPVGYRASPVRYGAPPLGYGAPPAGYGAPP--LGYGAPPLGYGTPP 249
Score = 31.1 bits (67), Expect = 3.6
Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 5/69 (7%)
Frame = +2
Query: 449 RCTPTIQQAMQPXNPGVCPPANQNPAPILTQNPNMGYGFPPL--NTPNMPY---YMSNQN 613
R +P ++ P G PPA P+ P +GYG PPL P + Y N+
Sbjct: 211 RASP-VRYGAPPLGYGA-PPAGYGAPPLGYGAPPLGYGTPPLGYGAPPLGYGAPPAGNEG 268
Query: 614 PYTGYGTQP 640
P GY P
Sbjct: 269 PPAGYRASP 277
>AY533507-1|AAS45401.1| 796|Homo sapiens ARC/mediator
transcriptional coactivator subunit protein.
Length = 796
Score = 31.1 bits (67), Expect = 3.6
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 476 MQPXNPGVCPPANQNPAPILTQNPNMGYGFPPLNTPNM 589
+Q PGV PP +Q PAP L P PP + P++
Sbjct: 309 LQQAAPGVGPPFSQAPAPQLPPGPPGAPKPPPASQPSL 346
>AJ617479-1|CAE84581.1| 754|Homo sapiens activator interaction
domain 1 protein protein.
Length = 754
Score = 31.1 bits (67), Expect = 3.6
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 476 MQPXNPGVCPPANQNPAPILTQNPNMGYGFPPLNTPNM 589
+Q PGV PP +Q PAP L P PP + P++
Sbjct: 309 LQQAAPGVGPPFSQAPAPQLPPGPPGAPKPPPASQPSL 346
>AF393575-1|AAQ02873.1| 235|Homo sapiens PAWP protein.
Length = 235
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +2
Query: 503 PPANQNPAPILTQNPNMGYGFPPLNTPNMPYYMSNQNPYTGYGTQP 640
PP +P+ P +GYG PP P + P GYGT P
Sbjct: 132 PPVGYRASPVRYGAPPLGYGAPPAGYGAPP--LGYGAPPLGYGTPP 175
Score = 31.1 bits (67), Expect = 3.6
Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 5/69 (7%)
Frame = +2
Query: 449 RCTPTIQQAMQPXNPGVCPPANQNPAPILTQNPNMGYGFPPL--NTPNMPY---YMSNQN 613
R +P ++ P G PPA P+ P +GYG PPL P + Y N+
Sbjct: 137 RASP-VRYGAPPLGYGA-PPAGYGAPPLGYGAPPLGYGTPPLGYGAPPLGYGAPPAGNEG 194
Query: 614 PYTGYGTQP 640
P GY P
Sbjct: 195 PPAGYRASP 203
>AF283769-1|AAG15589.1| 574|Homo sapiens protein ( Homo sapiens
clone TCBAP0758 mRNA sequence. ).
Length = 574
Score = 31.1 bits (67), Expect = 3.6
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 476 MQPXNPGVCPPANQNPAPILTQNPNMGYGFPPLNTPNM 589
+Q PGV PP +Q PAP L P PP + P++
Sbjct: 90 LQQAAPGVGPPFSQAPAPQLPPGPPGAPKPPPASQPSL 127
>AF261072-1|AAM20739.1| 747|Homo sapiens p78 protein.
Length = 747
Score = 31.1 bits (67), Expect = 3.6
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 476 MQPXNPGVCPPANQNPAPILTQNPNMGYGFPPLNTPNM 589
+Q PGV PP +Q PAP L P PP + P++
Sbjct: 309 LQQAAPGVGPPFSQAPAPQLPPGPPGAPKPPPASQPSL 346
>Y08262-1|CAA69589.1| 914|Homo sapiens SCA2 protein.
Length = 914
Score = 30.3 bits (65), Expect = 6.3
Identities = 16/59 (27%), Positives = 24/59 (40%)
Frame = +2
Query: 458 PTIQQAMQPXNPGVCPPANQNPAPILTQNPNMGYGFPPLNTPNMPYYMSNQNPYTGYGT 634
P + +P P P A+ +PAP+ T M PP +P + N G G+
Sbjct: 503 PPSRPPSRPSRPPSHPSAHGSPAPVSTMPKRMSSEGPPRMSPKAQRHPRNHRVSAGRGS 561
>U70323-1|AAB19200.1| 1312|Homo sapiens ataxin-2 protein.
Length = 1312
Score = 30.3 bits (65), Expect = 6.3
Identities = 16/59 (27%), Positives = 24/59 (40%)
Frame = +2
Query: 458 PTIQQAMQPXNPGVCPPANQNPAPILTQNPNMGYGFPPLNTPNMPYYMSNQNPYTGYGT 634
P + +P P P A+ +PAP+ T M PP +P + N G G+
Sbjct: 583 PPSRPPSRPSRPPSHPSAHGSPAPVSTMPKRMSSEGPPRMSPKAQRHPRNHRVSAGRGS 641
>BC114546-1|AAI14547.1| 1006|Homo sapiens ATXN2 protein protein.
Length = 1006
Score = 30.3 bits (65), Expect = 6.3
Identities = 16/59 (27%), Positives = 24/59 (40%)
Frame = +2
Query: 458 PTIQQAMQPXNPGVCPPANQNPAPILTQNPNMGYGFPPLNTPNMPYYMSNQNPYTGYGT 634
P + +P P P A+ +PAP+ T M PP +P + N G G+
Sbjct: 295 PPSRPPSRPSRPPSHPSAHGSPAPVSTMPKRMSSEGPPRMSPKAQRHPRNHRVSAGRGS 353
>BC111757-1|AAI11758.1| 1127|Homo sapiens ATXN2 protein protein.
Length = 1127
Score = 30.3 bits (65), Expect = 6.3
Identities = 16/59 (27%), Positives = 24/59 (40%)
Frame = +2
Query: 458 PTIQQAMQPXNPGVCPPANQNPAPILTQNPNMGYGFPPLNTPNMPYYMSNQNPYTGYGT 634
P + +P P P A+ +PAP+ T M PP +P + N G G+
Sbjct: 373 PPSRPPSRPSRPPSHPSAHGSPAPVSTMPKRMSSEGPPRMSPKAQRHPRNHRVSAGRGS 431
>BC063284-1|AAH63284.1| 797|Homo sapiens CAS1 domain containing 1
protein.
Length = 797
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Frame = -1
Query: 438 KWWNCWSIERFNRFNGLL-----LSVFNDQLMSIDEDTVDFSNNYSSVMFISNTNCYLLT 274
+WW W ++R+ F+G+L L++ Q++S + FSN S+ + + +L
Sbjct: 595 EWWFRWRLDRYVVFHGMLFAFIYLALQKRQILSEGKGEPLFSNKISNFLLFISVVSFLTY 654
Query: 273 SI 268
SI
Sbjct: 655 SI 656
>AK024866-1|BAB15028.1| 268|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21213 fis, clone COL00517. ).
Length = 268
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Frame = -1
Query: 438 KWWNCWSIERFNRFNGLL-----LSVFNDQLMSIDEDTVDFSNNYSSVMFISNTNCYLLT 274
+WW W ++R+ F+G+L L++ Q++S + FSN S+ + + +L
Sbjct: 70 EWWFRWRLDRYVVFHGMLFAFIYLALQERQILSEGKGEPLFSNKISNFLLFISVVSFLTY 129
Query: 273 SI 268
SI
Sbjct: 130 SI 131
>AF397424-1|AAK97479.2| 797|Homo sapiens C7ORF12 protein.
Length = 797
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Frame = -1
Query: 438 KWWNCWSIERFNRFNGLL-----LSVFNDQLMSIDEDTVDFSNNYSSVMFISNTNCYLLT 274
+WW W ++R+ F+G+L L++ Q++S + FSN S+ + + +L
Sbjct: 595 EWWFRWRLDRYVVFHGMLFAFIYLALQKRQILSEGKGEPLFSNKISNFLLFISVVSFLTY 654
Query: 273 SI 268
SI
Sbjct: 655 SI 656
>AF355594-1|AAL33538.1| 797|Homo sapiens O-acetyltransferase
protein.
Length = 797
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Frame = -1
Query: 438 KWWNCWSIERFNRFNGLL-----LSVFNDQLMSIDEDTVDFSNNYSSVMFISNTNCYLLT 274
+WW W ++R+ F+G+L L++ Q++S + FSN S+ + + +L
Sbjct: 595 EWWFRWRLDRYVFFHGMLFAFIYLALQKRQILSEGKGEPLFSNKISNFLLFISVVSFLTY 654
Query: 273 SI 268
SI
Sbjct: 655 SI 656
>AB073397-1|BAE45726.1| 463|Homo sapiens putative protein product
of Nbla04196 protein.
Length = 463
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Frame = -1
Query: 438 KWWNCWSIERFNRFNGLL-----LSVFNDQLMSIDEDTVDFSNNYSSVMFISNTNCYLLT 274
+WW W ++R+ F+G+L L++ Q++S + FSN S+ + + +L
Sbjct: 261 EWWFRWRLDRYVVFHGMLFAFIYLALQKRQILSEGKGEPLFSNKISNFLLFISVVSFLTY 320
Query: 273 SI 268
SI
Sbjct: 321 SI 322
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,236,682
Number of Sequences: 237096
Number of extensions: 2174999
Number of successful extensions: 5442
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5391
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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