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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_G01
         (657 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81122-3|CAB54313.1| 1076|Caenorhabditis elegans Hypothetical pr...    31   0.54 
Z81122-2|CAB03354.1| 1074|Caenorhabditis elegans Hypothetical pr...    31   0.54 
L16685-3|AAA28169.3|  321|Caenorhabditis elegans Hypothetical pr...    31   0.72 
Z70781-7|CAJ55254.1|  380|Caenorhabditis elegans Hypothetical pr...    31   0.95 
Z70781-6|CAA94831.2|  349|Caenorhabditis elegans Hypothetical pr...    31   0.95 
Z67756-2|CAA91763.1|  295|Caenorhabditis elegans Hypothetical pr...    31   0.95 
AL110477-13|CAB54337.2|  789|Caenorhabditis elegans Hypothetical...    31   0.95 
AF230279-1|AAG16654.1|  789|Caenorhabditis elegans SWI3-like pro...    31   0.95 
Z83223-4|CAB05716.2|  534|Caenorhabditis elegans Hypothetical pr...    30   1.3  
AL132864-1|CAB63392.1|  613|Caenorhabditis elegans Hypothetical ...    30   1.3  
AL023838-2|CAA19505.1|  452|Caenorhabditis elegans Hypothetical ...    30   1.7  
Z68753-3|CAA92988.3|  984|Caenorhabditis elegans Hypothetical pr...    29   2.2  
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr...    29   2.9  
AF016427-8|AAB65355.1|  513|Caenorhabditis elegans Hypothetical ...    29   2.9  
AC084156-4|AAK68488.2|  251|Caenorhabditis elegans Transforming ...    29   2.9  
Z75527-2|CAA99775.2|  636|Caenorhabditis elegans Hypothetical pr...    29   3.8  
U51997-1|AAG24067.1|  572|Caenorhabditis elegans Activated in bl...    29   3.8  
L23648-9|AAK95877.1|  466|Caenorhabditis elegans Prion-like-(q/n...    29   3.8  
AF370361-1|AAK52514.1|  636|Caenorhabditis elegans putative tran...    29   3.8  
AB096001-1|BAE53417.1|  676|Caenorhabditis elegans bHLH-PAS fact...    29   3.8  
AF000196-8|AAL11096.1|  624|Caenorhabditis elegans Hypothetical ...    25   5.7  
Z98866-26|CAM33505.1|  559|Caenorhabditis elegans Hypothetical p...    28   6.7  
Z67880-2|CAA91792.2|  505|Caenorhabditis elegans Hypothetical pr...    27   8.9  
U58751-7|AAB00658.2|  729|Caenorhabditis elegans Hepatocyte grow...    27   8.9  
U50197-7|AAM54189.1|  796|Caenorhabditis elegans Abnormal dauer ...    27   8.9  
U50197-6|AAK68348.1|  892|Caenorhabditis elegans Abnormal dauer ...    27   8.9  
U50197-5|AAM54188.1|  864|Caenorhabditis elegans Abnormal dauer ...    27   8.9  
AF005205-1|AAB61748.1|  796|Caenorhabditis elegans DAF-3 protein.      27   8.9  

>Z81122-3|CAB54313.1| 1076|Caenorhabditis elegans Hypothetical
           protein T13F2.3b protein.
          Length = 1076

 Score = 31.5 bits (68), Expect = 0.54
 Identities = 24/62 (38%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
 Frame = +2

Query: 473 AMQPXNPGVCPPAN--QNPAPILTQNPNMGYGFPPLNTPNMPYYMSNQNPYTGYGTQPQQ 646
           A  P  PG   P    Q PA   T   + G G  P  TP  P Y    NP      QPQQ
Sbjct: 270 AYPPGMPGPMTPGYPAQAPAAPRTTPGSAGPGTGPPGTPQRPQYPQGTNP------QPQQ 323

Query: 647 AQ 652
           AQ
Sbjct: 324 AQ 325


>Z81122-2|CAB03354.1| 1074|Caenorhabditis elegans Hypothetical
           protein T13F2.3a protein.
          Length = 1074

 Score = 31.5 bits (68), Expect = 0.54
 Identities = 24/62 (38%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
 Frame = +2

Query: 473 AMQPXNPGVCPPAN--QNPAPILTQNPNMGYGFPPLNTPNMPYYMSNQNPYTGYGTQPQQ 646
           A  P  PG   P    Q PA   T   + G G  P  TP  P Y    NP      QPQQ
Sbjct: 268 AYPPGMPGPMTPGYPAQAPAAPRTTPGSAGPGTGPPGTPQRPQYPQGTNP------QPQQ 321

Query: 647 AQ 652
           AQ
Sbjct: 322 AQ 323


>L16685-3|AAA28169.3|  321|Caenorhabditis elegans Hypothetical
           protein ZC21.3 protein.
          Length = 321

 Score = 31.1 bits (67), Expect = 0.72
 Identities = 19/57 (33%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
 Frame = +2

Query: 491 PGVCPPANQNPAPILTQNPNMGYGFPPLNTPNMPYYMSN--QNPYTGYGTQPQQAQS 655
           P    P   N AP  T +P   YG+   N        SN  +NP T YG   Q  Q+
Sbjct: 73  PSSSSPQYSNGAPSTTYSPTSTYGYSSQNYNPSSASSSNVYRNPSTSYGNTQQSNQN 129


>Z70781-7|CAJ55254.1|  380|Caenorhabditis elegans Hypothetical
           protein F57A8.2b protein.
          Length = 380

 Score = 30.7 bits (66), Expect = 0.95
 Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
 Frame = +2

Query: 479 QPXNPGVCPPANQNPAPILTQNPNMGYGFPPLNTPNMPY-----YMSNQNPYTGYGTQPQ 643
           QP  P   PPA    AP   Q+ + G G+    + N  +         QN Y GYG Q Q
Sbjct: 20  QPQQPSA-PPAAPAAAP---QDQSYGGGYYSQQSSNQGFDGYGQQSPTQNQYGGYGQQQQ 75

Query: 644 QAQS 655
           Q QS
Sbjct: 76  QQQS 79


>Z70781-6|CAA94831.2|  349|Caenorhabditis elegans Hypothetical
           protein F57A8.2a protein.
          Length = 349

 Score = 30.7 bits (66), Expect = 0.95
 Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
 Frame = +2

Query: 479 QPXNPGVCPPANQNPAPILTQNPNMGYGFPPLNTPNMPY-----YMSNQNPYTGYGTQPQ 643
           QP  P   PPA    AP   Q+ + G G+    + N  +         QN Y GYG Q Q
Sbjct: 20  QPQQPSA-PPAAPAAAP---QDQSYGGGYYSQQSSNQGFDGYGQQSPTQNQYGGYGQQQQ 75

Query: 644 QAQS 655
           Q QS
Sbjct: 76  QQQS 79


>Z67756-2|CAA91763.1|  295|Caenorhabditis elegans Hypothetical
           protein R07A4.3 protein.
          Length = 295

 Score = 30.7 bits (66), Expect = 0.95
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = +2

Query: 503 PPANQNPAPILTQNPNMGYGFPPLNTPNMPYYMS 604
           P   Q P P     P  G+ FPP   P MPY +S
Sbjct: 144 PHNTQFPFPNYPHLPGYGWPFPPFVNPFMPYVLS 177


>AL110477-13|CAB54337.2|  789|Caenorhabditis elegans Hypothetical
           protein Y113G7B.23 protein.
          Length = 789

 Score = 30.7 bits (66), Expect = 0.95
 Identities = 23/63 (36%), Positives = 25/63 (39%), Gaps = 9/63 (14%)
 Frame = +2

Query: 491 PGVCPPANQNPAPILTQNPN-------MGYGFPPLNTPNMPYYMS-NQNPYTGYGT-QPQ 643
           PG  PP  Q P       P         GYG+PP   P  PY     Q P   +G  QPQ
Sbjct: 703 PGGYPPQQQRPPYQAQPYPGPPPPQQQRGYGYPPPPQPGHPYQQPYGQMPPPPHGQYQPQ 762

Query: 644 QAQ 652
           Q Q
Sbjct: 763 QQQ 765


>AF230279-1|AAG16654.1|  789|Caenorhabditis elegans SWI3-like
           protein protein.
          Length = 789

 Score = 30.7 bits (66), Expect = 0.95
 Identities = 23/63 (36%), Positives = 25/63 (39%), Gaps = 9/63 (14%)
 Frame = +2

Query: 491 PGVCPPANQNPAPILTQNPN-------MGYGFPPLNTPNMPYYMS-NQNPYTGYGT-QPQ 643
           PG  PP  Q P       P         GYG+PP   P  PY     Q P   +G  QPQ
Sbjct: 703 PGGYPPQQQRPPYQAQPYPGPPPPQQQRGYGYPPPPQPGHPYQQPYGQMPPPPHGQYQPQ 762

Query: 644 QAQ 652
           Q Q
Sbjct: 763 QQQ 765


>Z83223-4|CAB05716.2|  534|Caenorhabditis elegans Hypothetical
           protein E01G4.4 protein.
          Length = 534

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 19/50 (38%), Positives = 20/50 (40%)
 Frame = +2

Query: 503 PPANQNPAPILTQNPNMGYGFPPLNTPNMPYYMSNQNPYTGYGTQPQQAQ 652
           PPA QN    L QNP  GYG+                 Y GY  Q QQ Q
Sbjct: 17  PPAQQNQDD-LYQNPQAGYGY----NNQQQQQQGRPQQYAGYPPQRQQQQ 61


>AL132864-1|CAB63392.1|  613|Caenorhabditis elegans Hypothetical
           protein Y53H1A.1 protein.
          Length = 613

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 19/56 (33%), Positives = 24/56 (42%)
 Frame = +2

Query: 479 QPXNPGVCPPANQNPAPILTQNPNMGYGFPPLNTPNMPYYMSNQNPYTGYGTQPQQ 646
           QP +PG  PPA+Q+             G P  + P+ P    NQ P  GY   P Q
Sbjct: 52  QPRHPG--PPAHQDWGDWSANRDEQWRGPPGPSGPSGPPVYHNQGPPRGYPPPPPQ 105


>AL023838-2|CAA19505.1|  452|Caenorhabditis elegans Hypothetical
           protein Y43C5A.2 protein.
          Length = 452

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 15/45 (33%), Positives = 17/45 (37%)
 Frame = +2

Query: 503 PPANQNPAPILTQNPNMGYGFPPLNTPNMPYYMSNQNPYTGYGTQ 637
           P     P P  T+ P  G   PP  TP  P   S  +  T  G Q
Sbjct: 166 PSTTSTPEPTTTEVPFTGSTLPPTTTPKPPMDCSEISNLTSSGVQ 210


>Z68753-3|CAA92988.3|  984|Caenorhabditis elegans Hypothetical
           protein ZC518.2 protein.
          Length = 984

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
 Frame = +2

Query: 455 TPTIQQAM--QPXNPGVCPPANQNPAPILTQNPNMGYGFPPLNTPNM 589
           TP+ QQ M  +P  P   PPA+Q          N  YG P +  P M
Sbjct: 176 TPSYQQQMAPRPQAPAAYPPASQQQGYPPQPQQNSQYGQPQVPQPQM 222


>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
           protein C01G8.9a protein.
          Length = 1724

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
 Frame = +2

Query: 482 PXNPGVCPPANQNPAPILTQNPNMGYGFPPLNTPNMPYYMSN-QNP 616
           P  PG  PP    P       P   YG+PP   P   ++ S+ Q+P
Sbjct: 731 PGYPGYGPPGAMRPPAGFAPPPGAPYGYPPGAPPPAGFHPSHPQHP 776


>AF016427-8|AAB65355.1|  513|Caenorhabditis elegans Hypothetical
           protein F32D1.9 protein.
          Length = 513

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 8/62 (12%)
 Frame = +2

Query: 491 PGVCPPANQNPAPILTQNPNMGYGFPPLN-TPNMP-------YYMSNQNPYTGYGTQPQQ 646
           PGV      + AP+L    ++  G PPL   PNMP         MS   P  G+   P Q
Sbjct: 294 PGVESAPGASVAPLLPGGLDLNLGLPPLGFNPNMPPPGMPPMGMMSTSLPPPGFAMPPPQ 353

Query: 647 AQ 652
            Q
Sbjct: 354 FQ 355


>AC084156-4|AAK68488.2|  251|Caenorhabditis elegans Transforming
           growth factor betafamily protein 3 protein.
          Length = 251

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = -1

Query: 498 TPGXQGCIACCIVGVHLRLPK-WWNCWSIERFNRFNGLLLSVFNDQLMSIDEDTV 337
           T G   C+ CC++  ++   +  WN W +       G   +V +D + S + D V
Sbjct: 150 TAGTSDCVGCCVIPFYVNFTEIGWNDWILSP----PGFYANVCSDTVCSTESDEV 200


>Z75527-2|CAA99775.2|  636|Caenorhabditis elegans Hypothetical
           protein C15C8.2 protein.
          Length = 636

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 16/61 (26%), Positives = 29/61 (47%)
 Frame = +2

Query: 413 SMLQQFHHLGNLRCTPTIQQAMQPXNPGVCPPANQNPAPILTQNPNMGYGFPPLNTPNMP 592
           SM   +  + + + +P   +  QP +P   PP  + P  ++ Q P +G G  P   P++ 
Sbjct: 427 SMRHTYPTVFSCQDSPPPSEEQQPSSPQT-PPFTEQPPMLVEQKPLIGAGIAP-GFPSLD 484

Query: 593 Y 595
           Y
Sbjct: 485 Y 485


>U51997-1|AAG24067.1|  572|Caenorhabditis elegans Activated in
           blocked unfolded proteinresponse protein 2 protein.
          Length = 572

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = +2

Query: 419 LQQFHHLGNLRCTPTIQQAMQPXNPGVCPPANQNPAP 529
           +QQ +   NL C PT QQA+        P   Q  AP
Sbjct: 197 VQQCNQHCNLECQPTCQQAVSQCQQQCAPQCQQPSAP 233


>L23648-9|AAK95877.1|  466|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 38
           protein.
          Length = 466

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +2

Query: 470 QAMQPXNPGVCPPANQ-NPAPILTQNPNMGYGFPPLNTPNMPYYMS 604
           QA     PG+ P ++     P+    P M  G PP+  PNMP + S
Sbjct: 76  QAGPSGMPGMPPSSHPYGYPPMHGMPPGMPQGMPPMMDPNMPDFSS 121


>AF370361-1|AAK52514.1|  636|Caenorhabditis elegans putative
           transcription factor C15C8.2protein.
          Length = 636

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 16/61 (26%), Positives = 29/61 (47%)
 Frame = +2

Query: 413 SMLQQFHHLGNLRCTPTIQQAMQPXNPGVCPPANQNPAPILTQNPNMGYGFPPLNTPNMP 592
           SM   +  + + + +P   +  QP +P   PP  + P  ++ Q P +G G  P   P++ 
Sbjct: 427 SMRHTYPTVFSCQDSPPPSEEQQPSSPQT-PPFTEQPPMLVEQKPLIGAGIAP-GFPSLD 484

Query: 593 Y 595
           Y
Sbjct: 485 Y 485


>AB096001-1|BAE53417.1|  676|Caenorhabditis elegans bHLH-PAS factor
           protein.
          Length = 676

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 16/61 (26%), Positives = 29/61 (47%)
 Frame = +2

Query: 413 SMLQQFHHLGNLRCTPTIQQAMQPXNPGVCPPANQNPAPILTQNPNMGYGFPPLNTPNMP 592
           SM   +  + + + +P   +  QP +P   PP  + P  ++ Q P +G G  P   P++ 
Sbjct: 427 SMRHTYPTVFSCQDSPPPSEEQQPSSPQT-PPFTEQPPMLVEQKPLIGAGIAP-GFPSLD 484

Query: 593 Y 595
           Y
Sbjct: 485 Y 485


>AF000196-8|AAL11096.1|  624|Caenorhabditis elegans Hypothetical
           protein B0041.2b protein.
          Length = 624

 Score = 25.0 bits (52), Expect(2) = 5.7
 Identities = 10/26 (38%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
 Frame = +2

Query: 539 QNPNMGYGFPPLNTP--NMPYYMSNQ 610
           Q P  G+  PP+  P    P+Y  NQ
Sbjct: 98  QQPQQGFNMPPMMVPPGQPPFYGGNQ 123



 Score = 21.4 bits (43), Expect(2) = 5.7
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = +2

Query: 407 NRSMLQQFHHLGNLRCTPTIQQAMQPXNPGVCPPANQ 517
           N+ + Q  HH G  R  P   +  Q  +P   PP  Q
Sbjct: 33  NQRIQQNPHHGGMNRMMPHGFRPQQGHHPSHMPPYGQ 69


>Z98866-26|CAM33505.1|  559|Caenorhabditis elegans Hypothetical
           protein Y49E10.29 protein.
          Length = 559

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 21/70 (30%), Positives = 26/70 (37%), Gaps = 5/70 (7%)
 Frame = +2

Query: 458 PTIQQAMQPXNPGVCPPANQN-PAPILTQNPN--MGYGFPPLNTPNM--PYYMSNQNPYT 622
           P +QQA     P   PP  QN P P + Q P+       PP   P    P   +   P  
Sbjct: 360 PPVQQAPPKPTPQQAPPVRQNPPMPAVQQAPSSQQATQAPPKPAPQQAPPVQQNPPKPTP 419

Query: 623 GYGTQPQQAQ 652
                 Q+AQ
Sbjct: 420 SPAPPAQKAQ 429


>Z67880-2|CAA91792.2|  505|Caenorhabditis elegans Hypothetical
           protein C34E7.1 protein.
          Length = 505

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 18/63 (28%), Positives = 24/63 (38%)
 Frame = +2

Query: 458 PTIQQAMQPXNPGVCPPANQNPAPILTQNPNMGYGFPPLNTPNMPYYMSNQNPYTGYGTQ 637
           P  +Q+ Q   P   PPA   P     Q   MG+G  P++T  +     N     G    
Sbjct: 10  PQPKQSRQQQYPSQQPPAYNYPHQGYGQMGQMGHGSLPMDTRGIQQQPQNMGTMMGRQVP 69

Query: 638 PQQ 646
            QQ
Sbjct: 70  LQQ 72


>U58751-7|AAB00658.2|  729|Caenorhabditis elegans Hepatocyte growth
           factor-regulatedtk substrate (hrs) family protein 1
           protein.
          Length = 729

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = +2

Query: 542 NPN-MGYGFPPLNTPNMPYYMSNQNPYTGYGTQPQ 643
           NP  MGYG PP + P  P     Q  Y GY   PQ
Sbjct: 551 NPQQMGYGAPPPSGPQQP----PQQSYYGYQQGPQ 581


>U50197-7|AAM54189.1|  796|Caenorhabditis elegans Abnormal dauer
           formation protein3, isoform c protein.
          Length = 796

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 33/92 (35%), Positives = 39/92 (42%), Gaps = 16/92 (17%)
 Frame = +2

Query: 392 PLNLLNRS--MLQQFHHLGNLRCTPTIQQAMQPXNPGV------CP----PANQNPAPIL 535
           P+N+  R   M QQ   +G     P   QA  P NPGV       P    P N NP P +
Sbjct: 293 PMNMHTRPQPMPQQLPSVGATFAHPLPHQA--PHNPGVSHPYSIAPQTHYPLNMNPIPQM 350

Query: 536 TQNPNMGYGFPPLNT---PNMPYYMS-NQNPY 619
            Q P M    PPL+     N P   S N NP+
Sbjct: 351 PQMPQMP---PPLHQGYGMNGPSCSSENNNPF 379


>U50197-6|AAK68348.1|  892|Caenorhabditis elegans Abnormal dauer
           formation protein3, isoform a protein.
          Length = 892

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 33/92 (35%), Positives = 39/92 (42%), Gaps = 16/92 (17%)
 Frame = +2

Query: 392 PLNLLNRS--MLQQFHHLGNLRCTPTIQQAMQPXNPGV------CP----PANQNPAPIL 535
           P+N+  R   M QQ   +G     P   QA  P NPGV       P    P N NP P +
Sbjct: 389 PMNMHTRPQPMPQQLPSVGATFAHPLPHQA--PHNPGVSHPYSIAPQTHYPLNMNPIPQM 446

Query: 536 TQNPNMGYGFPPLNT---PNMPYYMS-NQNPY 619
            Q P M    PPL+     N P   S N NP+
Sbjct: 447 PQMPQMP---PPLHQGYGMNGPSCSSENNNPF 475


>U50197-5|AAM54188.1|  864|Caenorhabditis elegans Abnormal dauer
           formation protein3, isoform b protein.
          Length = 864

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 33/92 (35%), Positives = 39/92 (42%), Gaps = 16/92 (17%)
 Frame = +2

Query: 392 PLNLLNRS--MLQQFHHLGNLRCTPTIQQAMQPXNPGV------CP----PANQNPAPIL 535
           P+N+  R   M QQ   +G     P   QA  P NPGV       P    P N NP P +
Sbjct: 361 PMNMHTRPQPMPQQLPSVGATFAHPLPHQA--PHNPGVSHPYSIAPQTHYPLNMNPIPQM 418

Query: 536 TQNPNMGYGFPPLNT---PNMPYYMS-NQNPY 619
            Q P M    PPL+     N P   S N NP+
Sbjct: 419 PQMPQMP---PPLHQGYGMNGPSCSSENNNPF 447


>AF005205-1|AAB61748.1|  796|Caenorhabditis elegans DAF-3 protein.
          Length = 796

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 33/92 (35%), Positives = 39/92 (42%), Gaps = 16/92 (17%)
 Frame = +2

Query: 392 PLNLLNRS--MLQQFHHLGNLRCTPTIQQAMQPXNPGV------CP----PANQNPAPIL 535
           P+N+  R   M QQ   +G     P   QA  P NPGV       P    P N NP P +
Sbjct: 293 PMNMHTRPQPMPQQLPSVGATFAHPLPHQA--PHNPGVSHPYSIAPQTHYPLNMNPIPQM 350

Query: 536 TQNPNMGYGFPPLNT---PNMPYYMS-NQNPY 619
            Q P M    PPL+     N P   S N NP+
Sbjct: 351 PQMPQMP---PPLHQGYGMNGPSCSSENNNPF 379


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,507,245
Number of Sequences: 27780
Number of extensions: 340168
Number of successful extensions: 1151
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1149
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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