Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_F22
         (332 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69665-1|CAA93520.5| 1396|Caenorhabditis elegans Hypothetical pr...    28   1.9  
Z81529-5|CAB04296.1|  288|Caenorhabditis elegans Hypothetical pr...    27   4.3  
AF099002-3|AAO91691.1|  570|Caenorhabditis elegans Hypothetical ...    27   4.3  
AF099002-2|AAC68740.2|  556|Caenorhabditis elegans Hypothetical ...    27   4.3  
AF099002-1|AAK68587.1|  559|Caenorhabditis elegans Hypothetical ...    27   4.3  
AF067622-2|AAK68367.1|  651|Caenorhabditis elegans Hypothetical ...    27   4.3  
Z81545-9|CAB04445.1|  173|Caenorhabditis elegans Hypothetical pr...    26   5.7  
U21323-10|AAW30670.1|  805|Caenorhabditis elegans Hypothetical p...    26   7.5  
U21323-9|AAA62553.1|  971|Caenorhabditis elegans Hypothetical pr...    26   7.5  
Z77662-14|CAI79239.1|  245|Caenorhabditis elegans Hypothetical p...    25   10.0 
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p...    25   10.0 
AC024817-24|AAF59584.3|  237|Caenorhabditis elegans C-type lecti...    25   10.0 
AC006611-4|AAK85456.2|  328|Caenorhabditis elegans Hypothetical ...    25   10.0 

>Z69665-1|CAA93520.5| 1396|Caenorhabditis elegans Hypothetical protein
            ZK897.1 protein.
          Length = 1396

 Score = 27.9 bits (59), Expect = 1.9
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = +3

Query: 150  TLAGDSTGSKTDSARQPGPARIASGR 227
            T+AGD++   T +ARQP  A+ +SG+
Sbjct: 1261 TMAGDTSAQATTTARQPLTAQQSSGQ 1286


>Z81529-5|CAB04296.1|  288|Caenorhabditis elegans Hypothetical
           protein F35E8.7 protein.
          Length = 288

 Score = 26.6 bits (56), Expect = 4.3
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = +3

Query: 177 KTDSARQPGPARIASGRTPVPPXATLGPALITQTS 281
           KT      GP    S   P  P  T+ PA++T T+
Sbjct: 185 KTCKRCTSGPTATTSTAAPAAPTTTVAPAVVTTTA 219


>AF099002-3|AAO91691.1|  570|Caenorhabditis elegans Hypothetical
           protein Y71H10B.1c protein.
          Length = 570

 Score = 26.6 bits (56), Expect = 4.3
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 221 GADASPPXGDAGSRPHHSDITT 286
           G+DAS   GD  + P H D+ T
Sbjct: 539 GSDASSNAGDISTEPPHQDVVT 560


>AF099002-2|AAC68740.2|  556|Caenorhabditis elegans Hypothetical
           protein Y71H10B.1a protein.
          Length = 556

 Score = 26.6 bits (56), Expect = 4.3
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 221 GADASPPXGDAGSRPHHSDITT 286
           G+DAS   GD  + P H D+ T
Sbjct: 525 GSDASSNAGDISTEPPHQDVVT 546


>AF099002-1|AAK68587.1|  559|Caenorhabditis elegans Hypothetical
           protein Y71H10B.1b protein.
          Length = 559

 Score = 26.6 bits (56), Expect = 4.3
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 221 GADASPPXGDAGSRPHHSDITT 286
           G+DAS   GD  + P H D+ T
Sbjct: 528 GSDASSNAGDISTEPPHQDVVT 549


>AF067622-2|AAK68367.1|  651|Caenorhabditis elegans Hypothetical
           protein F33E11.3 protein.
          Length = 651

 Score = 26.6 bits (56), Expect = 4.3
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +2

Query: 236 PPXGDAGSRPHHSDITTCPTEMPSTTSYSAR 328
           PP   A S+ H S  +T PT+  S  + +AR
Sbjct: 86  PPTTPAASKSHSSKKSTTPTQSDSAAAAAAR 116


>Z81545-9|CAB04445.1|  173|Caenorhabditis elegans Hypothetical
           protein F49H6.12 protein.
          Length = 173

 Score = 26.2 bits (55), Expect = 5.7
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = +3

Query: 135 GGDSGTLAGDSTGSKTDSARQPGPARIASGRTPVPPXATLGPALI 269
           G D   L+GD  GS  +  +     +IA+   P  P +  GP ++
Sbjct: 50  GPDVRILSGDRGGSVGERLKTTESPKIATTAEPAAPKSAAGPIVL 94


>U21323-10|AAW30670.1|  805|Caenorhabditis elegans Hypothetical
           protein C45G9.10b protein.
          Length = 805

 Score = 25.8 bits (54), Expect = 7.5
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +2

Query: 254 GSRPHHSDITTCPTEMPSTTSY 319
           GSR      TT PT +P TTSY
Sbjct: 619 GSRTFERPQTTSPTYIPVTTSY 640


>U21323-9|AAA62553.1|  971|Caenorhabditis elegans Hypothetical
           protein C45G9.10a protein.
          Length = 971

 Score = 25.8 bits (54), Expect = 7.5
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +2

Query: 254 GSRPHHSDITTCPTEMPSTTSY 319
           GSR      TT PT +P TTSY
Sbjct: 785 GSRTFERPQTTSPTYIPVTTSY 806


>Z77662-14|CAI79239.1|  245|Caenorhabditis elegans Hypothetical
           protein F47B8.13 protein.
          Length = 245

 Score = 25.4 bits (53), Expect = 10.0
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = +3

Query: 135 GGDSGTLAGDSTGSKTDSARQPGPARIASGRTPVPPXA 248
           GG  G  AG S G+  ++   P PA  A    P P  A
Sbjct: 20  GGGGGGEAGYSGGAGVEAPPPPPPADAAPAPAPEPAPA 57


>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
            protein T19D12.1 protein.
          Length = 1844

 Score = 25.4 bits (53), Expect = 10.0
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +3

Query: 135  GGDSGTLAGDSTGSKTDSARQPGPARIASGRTPVPPXAT 251
            GG+SG+   +   S   S      A I S  TP+P  A+
Sbjct: 1625 GGNSGSTTVNFQSSSVASTVASSTANIESSTTPIPTCAS 1663


>AC024817-24|AAF59584.3|  237|Caenorhabditis elegans C-type lectin
           protein 83 protein.
          Length = 237

 Score = 25.4 bits (53), Expect = 10.0
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +2

Query: 224 ADASPPXGDAGSRPHHSDITTCPTEMPSTTSY 319
           + ASP   D+ +  + +D +T P    STTSY
Sbjct: 204 SSASPYPTDSSTSSYPTDSSTSPYSTGSTTSY 235


>AC006611-4|AAK85456.2|  328|Caenorhabditis elegans Hypothetical
           protein C30F8.3 protein.
          Length = 328

 Score = 25.4 bits (53), Expect = 10.0
 Identities = 12/39 (30%), Positives = 15/39 (38%)
 Frame = +3

Query: 159 GDSTGSKTDSARQPGPARIASGRTPVPPXATLGPALITQ 275
           G   GS+        PA + S   P PP     P + TQ
Sbjct: 34  GGGCGSRPGGCVAAAPAALYSAPVPPPPAYPFAPQVFTQ 72


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,801,521
Number of Sequences: 27780
Number of extensions: 57648
Number of successful extensions: 251
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 251
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 408121444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)