Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_F20
         (497 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   1.5  
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    22   3.5  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    22   3.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.1  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.1  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.1  
AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    21   8.1  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -2

Query: 412 SSFFFNFITDLINFFVYFIPINI 344
           +++F N    L NFF + +P+ I
Sbjct: 347 TTYFLNTYPHLFNFFEFSVPLAI 369


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +2

Query: 344 DINWDKINKKVDKISDKIEKEATGKS 421
           DIN D   K +D +   ++    GKS
Sbjct: 132 DINMDYFKKCIDPVDKVLQDAKIGKS 157


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +2

Query: 344 DINWDKINKKVDKISDKIEKEATGKS 421
           DIN D   K +D +   ++    GKS
Sbjct: 132 DINMDYFKKCIDPVDKVLQDAKIGKS 157


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -3

Query: 264 IDIKPVIHPDAVPKISCLV 208
           ++IKPV+   A+P IS ++
Sbjct: 344 LEIKPVLGGTALPDISEII 362


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -3

Query: 264 IDIKPVIHPDAVPKISCLV 208
           ++IKPV+   A+P IS ++
Sbjct: 344 LEIKPVLGGTALPDISEII 362


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -3

Query: 264 IDIKPVIHPDAVPKISCLV 208
           ++IKPV+   A+P IS ++
Sbjct: 344 LEIKPVLGGTALPDISEII 362


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -3

Query: 264 IDIKPVIHPDAVPKISCLV 208
           ++IKPV+   A+P IS ++
Sbjct: 344 LEIKPVLGGTALPDISEII 362


>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -2

Query: 307 DSTSKSNSCYFSNLHRYKTSYPS*C 233
           D+T   N CY  +L R K +    C
Sbjct: 30  DATKPGNVCYQRDLFRQKITGSENC 54


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,814
Number of Sequences: 336
Number of extensions: 1746
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)