Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_F20
         (497 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011027-1|AAR30187.1|  156|Drosophila melanogaster RE45833p pro...    69   5e-12
AE014134-1797|AAF52886.1|  156|Drosophila melanogaster CG5676-PA...    69   5e-12
AE014296-2445|AAF49690.1|  744|Drosophila melanogaster CG3349-PA...    28   8.1  

>BT011027-1|AAR30187.1|  156|Drosophila melanogaster RE45833p
           protein.
          Length = 156

 Score = 68.5 bits (160), Expect = 5e-12
 Identities = 31/94 (32%), Positives = 52/94 (55%)
 Frame = +2

Query: 173 ERAIADIGKTSATKQLILGTASGWITGFISMXXXXXXXXXXXXXXXXXXXXSQKGYIDIN 352
           ++   DIG+ SA  Q+++G +SGW+TG+ +M                     Q+G I IN
Sbjct: 9   KKVFNDIGQRSAYSQMLIGVSSGWVTGYTTMKIGKFAAFAVGGSIILLEIAHQEGLIKIN 68

Query: 353 WDKINKKVDKISDKIEKEATGKSPDWFEKVFVFV 454
           W K++K VDK++DK+E  + G+  +W +K   +V
Sbjct: 69  WSKLDKSVDKLADKVE-ASLGREKNWKDKTERYV 101


>AE014134-1797|AAF52886.1|  156|Drosophila melanogaster CG5676-PA
           protein.
          Length = 156

 Score = 68.5 bits (160), Expect = 5e-12
 Identities = 31/94 (32%), Positives = 52/94 (55%)
 Frame = +2

Query: 173 ERAIADIGKTSATKQLILGTASGWITGFISMXXXXXXXXXXXXXXXXXXXXSQKGYIDIN 352
           ++   DIG+ SA  Q+++G +SGW+TG+ +M                     Q+G I IN
Sbjct: 9   KKVFNDIGQRSAYSQMLIGVSSGWVTGYTTMKIGKFAAFAVGGSIILLEIAHQEGLIKIN 68

Query: 353 WDKINKKVDKISDKIEKEATGKSPDWFEKVFVFV 454
           W K++K VDK++DK+E  + G+  +W +K   +V
Sbjct: 69  WSKLDKSVDKLADKVE-ASLGREKNWKDKTERYV 101


>AE014296-2445|AAF49690.1|  744|Drosophila melanogaster CG3349-PA
           protein.
          Length = 744

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +2

Query: 344 DINWDKINKKVDKISDKIEKEATGKSPDWFEKVFVFVKSN 463
           D+NW K+ K VD ++   E      SP +F  + V    N
Sbjct: 451 DVNWPKLRKSVDDVNKMFE-----NSPSFFANITVISMKN 485


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,478,745
Number of Sequences: 53049
Number of extensions: 263899
Number of successful extensions: 684
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 682
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)