Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_F20
         (497 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49130-5|CAA88970.1|  138|Caenorhabditis elegans Hypothetical pr...    40   0.001
AF067613-9|AAN73863.2|  326|Caenorhabditis elegans Serpentine re...    28   4.3  
AF106575-16|AAC78161.2|  334|Caenorhabditis elegans Serpentine r...    27   5.7  
Z71259-2|CAA95790.1|  336|Caenorhabditis elegans Hypothetical pr...    27   7.6  

>Z49130-5|CAA88970.1|  138|Caenorhabditis elegans Hypothetical
           protein T06D8.7 protein.
          Length = 138

 Score = 39.9 bits (89), Expect = 0.001
 Identities = 25/102 (24%), Positives = 41/102 (40%)
 Frame = +2

Query: 113 KNEDASEEAKKIVDDAKNFIERAIADIGKTSATKQLILGTASGWITGFISMXXXXXXXXX 292
           KN+  S +A K V DA + +   + D+ K     QL +G   G +TG+            
Sbjct: 6   KNDGGSGKAGKGVSDAIDTVLYYVVDLKKQQPMVQLGVGAGFGTVTGYFVTKGGRLVAAT 65

Query: 293 XXXXXXXXXXXSQKGYIDINWDKINKKVDKISDKIEKEATGK 418
                        KGYI +N  KI + +  +   +  + +GK
Sbjct: 66  VGISFLLAQFAIHKGYITLNESKIERDMKNLHKSVMNKVSGK 107


>AF067613-9|AAN73863.2|  326|Caenorhabditis elegans Serpentine
           receptor, class z protein20 protein.
          Length = 326

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 8/29 (27%), Positives = 19/29 (65%)
 Frame = -2

Query: 406 FFFNFITDLINFFVYFIPININVAFLACN 320
           F  +++ ++I F  + +PI + +++L CN
Sbjct: 261 FDIDYVLEIIPFDCFLLPIIVQISYLGCN 289


>AF106575-16|AAC78161.2|  334|Caenorhabditis elegans Serpentine
           receptor, class h protein3 protein.
          Length = 334

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -2

Query: 463 ITFDKNKNLFKPIWGFSSSFFFNFITDLINFFVYFIPININV 338
           I  +K    FKP     + FF NF + +  F+V+FI   I V
Sbjct: 166 IQMEKRFGTFKPYMWCDNCFFMNFSSKI--FYVFFIVAGIAV 205


>Z71259-2|CAA95790.1|  336|Caenorhabditis elegans Hypothetical
           protein F13G3.2 protein.
          Length = 336

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = -2

Query: 442 NLFKPIWGFSS--SFFFNFITDLINFFVYFIPI 350
           +++ P  GFS   SF F F+T  I    YF+P+
Sbjct: 177 SIYAPFSGFSDTRSFQFLFVTAAIAIGAYFVPL 209


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,021,168
Number of Sequences: 27780
Number of extensions: 157902
Number of successful extensions: 561
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 561
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)