Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_F19
(648 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 23 2.9
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 23 2.9
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 23 2.9
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 23 2.9
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 22 3.8
AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 22 3.8
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 22 5.0
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 22 5.0
AY769608-1|AAV40984.1| 195|Tribolium castaneum heat shock prote... 22 5.0
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.6
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.6
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.6
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 21 8.7
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 21 8.7
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 22.6 bits (46), Expect = 2.9
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3
Query: 472 NNYTIF*YFEFYDCLTFSIPLLCINLLVIKCAAFYF 365
+ Y I+ + + CL F + +L I L+ AF+F
Sbjct: 294 SRYFIYMFVSVWKCLLFFVSVLFILLVKEGEVAFFF 329
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 22.6 bits (46), Expect = 2.9
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3
Query: 472 NNYTIF*YFEFYDCLTFSIPLLCINLLVIKCAAFYF 365
+ Y I+ + + CL F + +L I L+ AF+F
Sbjct: 294 SRYFIYMFVSVWKCLLFFVSVLFILLVKEGEVAFFF 329
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 22.6 bits (46), Expect = 2.9
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3
Query: 472 NNYTIF*YFEFYDCLTFSIPLLCINLLVIKCAAFYF 365
+ Y I+ + + CL F + +L I L+ AF+F
Sbjct: 294 SRYFIYMFVSVWKCLLFFVSVLFILLVKEGEVAFFF 329
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 22.6 bits (46), Expect = 2.9
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3
Query: 472 NNYTIF*YFEFYDCLTFSIPLLCINLLVIKCAAFYF 365
+ Y I+ + + CL F + +L I L+ AF+F
Sbjct: 294 SRYFIYMFVSVWKCLLFFVSVLFILLVKEGEVAFFF 329
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 22.2 bits (45), Expect = 3.8
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = -2
Query: 311 RTVGHLSCFWSEVCITFVWSSSNGDRIGRXREKAQRDQSSLHWLVL 174
R L+ F SE I +S +GDR REKA D + H VL
Sbjct: 420 RNADFLATFLSEQNIQS--TSIHGDRYQSEREKALLDFKTGHRKVL 463
>AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription
factor protein.
Length = 441
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3
Query: 306 SPKPPAHINLRPSPNIQQPRK 368
SP PP I+ +P+P+ Q P +
Sbjct: 329 SPPPPYQISAQPTPS-QSPNQ 348
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 21.8 bits (44), Expect = 5.0
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1
Query: 477 IPTIILYFNILNFMIA 430
+P I YFN + FM+A
Sbjct: 271 VPLIGTYFNCIMFMVA 286
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 21.8 bits (44), Expect = 5.0
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1
Query: 477 IPTIILYFNILNFMIA 430
+P I YFN + FM+A
Sbjct: 271 VPLIGTYFNCIMFMVA 286
>AY769608-1|AAV40984.1| 195|Tribolium castaneum heat shock protein
70 protein.
Length = 195
Score = 21.8 bits (44), Expect = 5.0
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -2
Query: 236 RIGRXREKAQRDQSSLH 186
++ R EKA+RD SS+H
Sbjct: 89 KLRREVEKAKRDLSSVH 105
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 21.4 bits (43), Expect = 6.6
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1
Query: 477 IPTIILYFNILNFMIA 430
IP + YFN + FM+A
Sbjct: 271 IPLLGTYFNCIMFMVA 286
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 21.4 bits (43), Expect = 6.6
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1
Query: 477 IPTIILYFNILNFMIA 430
IP + YFN + FM+A
Sbjct: 271 IPLLGTYFNCIMFMVA 286
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 21.4 bits (43), Expect = 6.6
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1
Query: 477 IPTIILYFNILNFMIA 430
IP + YFN + FM+A
Sbjct: 271 IPLLGTYFNCIMFMVA 286
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 21.0 bits (42), Expect = 8.7
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +3
Query: 279 TPEAAQVAHSPKPPAHINLRPSPNIQQP 362
+PE +QVA S P+ L P + P
Sbjct: 178 SPEMSQVAASWHTPSMYPLSPGAGFRSP 205
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 21.0 bits (42), Expect = 8.7
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +3
Query: 279 TPEAAQVAHSPKPPAHINLRPSPNIQQP 362
+PE +QVA S P+ L P + P
Sbjct: 70 SPEMSQVAASWHTPSMYPLSPGAGFRSP 97
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,734
Number of Sequences: 336
Number of extensions: 3197
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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