Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_F19
         (648 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72517-4|CAA96692.1|  105|Caenorhabditis elegans Hypothetical pr...    40   0.002
Z93383-4|CAB07626.1|   96|Caenorhabditis elegans Hypothetical pr...    30   1.2  
AC006733-5|AAF60485.2|  193|Caenorhabditis elegans Hypothetical ...    29   2.8  
Z11505-7|CAA77581.1|  918|Caenorhabditis elegans Hypothetical pr...    28   5.0  
U58754-3|AAX22293.1|  318|Caenorhabditis elegans Serpentine rece...    28   5.0  
AL034365-6|CAA22263.1|  347|Caenorhabditis elegans Hypothetical ...    28   5.0  
AF016670-5|AAB66104.1| 1193|Caenorhabditis elegans Hypothetical ...    27   8.7  

>Z72517-4|CAA96692.1|  105|Caenorhabditis elegans Hypothetical
           protein T28F4.5 protein.
          Length = 105

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = +2

Query: 62  IMSSTEETSQLKAGHPPAVKAGGMRITQHKTPHSKDSKEPANED 193
           +M +    +++K GHPPA K GG R+   K   + DS + AN +
Sbjct: 1   MMDNNITETEMKVGHPPANKVGGRRVVNRKDRKNSDSNDNANSE 44


>Z93383-4|CAB07626.1|   96|Caenorhabditis elegans Hypothetical
           protein F54B8.4 protein.
          Length = 96

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +2

Query: 74  TEETSQLKAGHPPAVKAGGMRITQHKTPHSKDS 172
           ++E +    GH PA K GG RI  H    +++S
Sbjct: 2   SKEDNNAVVGHQPATKVGGRRIADHGNQRAQNS 34


>AC006733-5|AAF60485.2|  193|Caenorhabditis elegans Hypothetical
           protein Y32H12A.4 protein.
          Length = 193

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = +2

Query: 77  EETSQLKAGHPPAVKAGGMRITQHKTP-HSKDSKEPANEDLTGLSGPSPXSV 229
           +E + L   HP     G M+I + KTP H  D +   +E + G+    P  V
Sbjct: 55  DEMNILATYHPTDKDYGSMKIDEPKTPYHHSDGESECDEGVLGVPTTRPRRV 106


>Z11505-7|CAA77581.1|  918|Caenorhabditis elegans Hypothetical
           protein F59B2.12 protein.
          Length = 918

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = +2

Query: 47  QNYQTIMSSTEETSQLKAGHPPAVKAGGMRITQHKTPHSKDSKEPANEDLTG 202
           Q YQ + + TE  S +  G+  ++  GG + + HK   +KD K    E   G
Sbjct: 848 QRYQKLGNGTE--SSMDVGYEKSMAKGGDQTSSHKKTLAKDGKGHFTETKDG 897


>U58754-3|AAX22293.1|  318|Caenorhabditis elegans Serpentine
           receptor, class sx protein16 protein.
          Length = 318

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +2

Query: 416 NRKC*AIIKFKILKYSIIVGMFYHSNRLAVPLASLVFMSNVEHVLLC 556
           N K   II + I+    I+G+F + N +AV L + V  SN   ++LC
Sbjct: 6   NYKMHRIIIYSIVFIFEILGLFGNINLIAVILRNKVLRSNFGLIMLC 52


>AL034365-6|CAA22263.1|  347|Caenorhabditis elegans Hypothetical
           protein Y69E1A.6 protein.
          Length = 347

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 14/42 (33%), Positives = 27/42 (64%)
 Frame = +2

Query: 497 LAVPLASLVFMSNVEHVLLCCLQRL*NMLLGLYSFHATATQF 622
           L +P+ ++V++    HVL    Q + N+++ +YSFHA+ + F
Sbjct: 259 LIIPIGTIVYL--FVHVLPNA-QEISNIMMAVYSFHASLSTF 297


>AF016670-5|AAB66104.1| 1193|Caenorhabditis elegans Hypothetical
            protein K02F6.4 protein.
          Length = 1193

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -3

Query: 490  AMVKHSNNYTIF*YFEFYDCL 428
            A VK++N YTIF Y+EF   L
Sbjct: 1144 AFVKNNNCYTIFTYYEFLQFL 1164


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,301,220
Number of Sequences: 27780
Number of extensions: 294503
Number of successful extensions: 750
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 750
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)