Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_F18
(528 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93; Eukaryo... 300 1e-80
UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82; Eukaryo... 272 4e-72
UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8; Euteleostomi... 239 2e-62
UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN full... 226 2e-58
UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21; Eukaryo... 221 1e-56
UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4; Eukaryot... 202 5e-51
UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19; Eukaryo... 189 3e-47
UniRef50_UPI000049933B Cluster: conserved hypothetical protein; ... 146 2e-34
UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;... 145 6e-34
UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma j... 104 1e-21
UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillard... 98 1e-19
UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamb... 95 1e-18
UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitoz... 82 9e-15
UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces ... 82 9e-15
UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whol... 80 3e-14
UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella... 59 5e-08
UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole gen... 59 7e-08
UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5; Archaea... 58 1e-07
UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7; Archaea... 54 3e-06
UniRef50_O58830 Cluster: 30S ribosomal protein S8e; n=6; Archaea... 45 0.001
UniRef50_Q0W1L5 Cluster: 30S ribosomal protein S8e; n=3; Euryarc... 42 0.009
UniRef50_P61300 Cluster: 30S ribosomal protein S8e; n=5; Methano... 42 0.012
UniRef50_Q2NEU6 Cluster: 30S ribosomal protein S8e; n=1; Methano... 41 0.015
UniRef50_Q9VL72 Cluster: CG5899-PA, isoform A; n=5; Diptera|Rep:... 38 0.19
UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1; Methano... 35 1.3
UniRef50_UPI0000F2B19F Cluster: PREDICTED: hypothetical protein;... 33 5.4
UniRef50_Q89D60 Cluster: Blr7583 protein; n=1; Bradyrhizobium ja... 33 5.4
UniRef50_A5E7M6 Cluster: Putative uncharacterized protein; n=1; ... 33 5.4
UniRef50_A0L8H8 Cluster: DNA repair protein RecN; n=2; cellular ... 32 7.1
UniRef50_Q962J8 Cluster: PV1H14180_P; n=2; Plasmodium vivax|Rep:... 32 7.1
UniRef50_A7F1W3 Cluster: Putative uncharacterized protein; n=1; ... 32 7.1
UniRef50_Q10SH0 Cluster: Fizzy-related protein, putative, expres... 32 9.4
UniRef50_Q3SAD8 Cluster: Putative uncharacterized protein; n=1; ... 32 9.4
>UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93;
Eukaryota|Rep: 40S ribosomal protein S8 - Homo sapiens
(Human)
Length = 208
Score = 300 bits (736), Expect = 1e-80
Identities = 136/174 (78%), Positives = 153/174 (87%)
Frame = +3
Query: 6 KYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNA 185
KYELGRPAANT++GP+RIH+VR RGGN KYRALRLD GNFSWGSEC TRKTRIIDVVYNA
Sbjct: 26 KYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNA 85
Query: 186 SNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKT 365
SNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K
Sbjct: 86 SNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKI 145
Query: 366 ARKYLARQRLAKVEGALXEQFHTGRLLACVASRPGQCGRADGYILXGKELEFYL 527
+KY R++ AK+ L EQF G+LLAC+ASRPGQCGRADGY+L GKELEFYL
Sbjct: 146 QKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYL 199
>UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82;
Eukaryota|Rep: 40S ribosomal protein S8 - Drosophila
melanogaster (Fruit fly)
Length = 208
Score = 272 bits (666), Expect = 4e-72
Identities = 125/176 (71%), Positives = 148/176 (84%), Gaps = 2/176 (1%)
Frame = +3
Query: 6 KYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNA 185
K+ELGRPAANT+LG R+H VR+RGGNTK RALRL+TGNF+W SE RKTRI DVVYNA
Sbjct: 26 KFELGRPAANTKLGSGRVHKVRTRGGNTKLRALRLETGNFAWASEGVARKTRIADVVYNA 85
Query: 186 SNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEA--IINKKRSQ 359
SNNELVRTKTLVKN+IVV+DATPFRQWYE+HY LPLGRK+ K + E+ ++ KKRS+
Sbjct: 86 SNNELVRTKTLVKNSIVVIDATPFRQWYEAHYVLPLGRKRNPKHAQKEDENDVLTKKRSE 145
Query: 360 KTARKYLARQRLAKVEGALXEQFHTGRLLACVASRPGQCGRADGYILXGKELEFYL 527
K +KYL RQ+ KVE AL +QF +GR+LAC++SRPGQCGR+DGYIL GKELEFYL
Sbjct: 146 KVMKKYLERQKYGKVEQALEDQFTSGRILACISSRPGQCGRSDGYILEGKELEFYL 201
>UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8;
Euteleostomi|Rep: Ribosomal protein S8 - Homo sapiens
(Human)
Length = 188
Score = 239 bits (586), Expect = 2e-62
Identities = 119/174 (68%), Positives = 136/174 (78%)
Frame = +3
Query: 6 KYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNA 185
KYELGRPAANT++GP+RIH+VR RGG C TRKTRIIDVVYNA
Sbjct: 26 KYELGRPAANTKIGPRRIHTVRVRGG-------------------C-TRKTRIIDVVYNA 65
Query: 186 SNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKT 365
SNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K
Sbjct: 66 SNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKI 125
Query: 366 ARKYLARQRLAKVEGALXEQFHTGRLLACVASRPGQCGRADGYILXGKELEFYL 527
+KY R++ AK+ L EQF G+LLAC+ASRPGQCGRADGY+L GKELEFYL
Sbjct: 126 QKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYL 179
>UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence; n=9;
Deuterostomia|Rep: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence - Mus
musculus (Mouse)
Length = 152
Score = 226 bits (553), Expect = 2e-58
Identities = 102/124 (82%), Positives = 113/124 (91%)
Frame = +3
Query: 6 KYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNA 185
KYELGRPAANT++GP+RIH+VR RGGN KYRALRLD GNFSWGSEC TRKTRIIDVVYNA
Sbjct: 26 KYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNA 85
Query: 186 SNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKT 365
SNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K
Sbjct: 86 SNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKI 145
Query: 366 ARKY 377
+KY
Sbjct: 146 QKKY 149
>UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21;
Eukaryota|Rep: 40S ribosomal protein S8 - Zea mays
(Maize)
Length = 221
Score = 221 bits (539), Expect = 1e-56
Identities = 111/183 (60%), Positives = 133/183 (72%), Gaps = 9/183 (4%)
Frame = +3
Query: 6 KYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYN 182
KYELGR ANT+L + + VR RGGN K+RALRLDTGN+SWGSE TRKTRI+DVVYN
Sbjct: 26 KYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYN 85
Query: 183 ASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKK--------GAKLTEAEEAI 338
ASNNELVRT+TLVK+AIV VDA PF+QWY +HY + +GRKK A+ E E A
Sbjct: 86 ASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGRKKKTPAAKKDNAEGQEVEAAA 145
Query: 339 INKKRSQKTARKYLARQRLAKVEGALXEQFHTGRLLACVASRPGQCGRADGYILXGKELE 518
K+S RK R+ ++ + EQF +GRLLAC++SRPGQCGRADGYIL GKELE
Sbjct: 146 EETKKSNHVTRKLEKRKEGRTLDPHIEEQFGSGRLLACISSRPGQCGRADGYILEGKELE 205
Query: 519 FYL 527
FY+
Sbjct: 206 FYM 208
>UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4;
Eukaryota|Rep: 40S ribosomal protein S8 - Theileria
parva
Length = 188
Score = 202 bits (492), Expect = 5e-51
Identities = 103/173 (59%), Positives = 127/173 (73%)
Frame = +3
Query: 6 KYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNA 185
KYELGRP++NT+LG + + VR RGGN K+RALRLD+GNFSWGS+ TRKTR++DVVYNA
Sbjct: 26 KYELGRPSSNTKLGSKLVRKVRCRGGNLKFRALRLDSGNFSWGSQNVTRKTRVMDVVYNA 85
Query: 186 SNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKT 365
S+NELVRTKTLVKNAIV VD TPF+ W+++HY L LG K +E +A S+K
Sbjct: 86 SSNELVRTKTLVKNAIVTVDPTPFKLWFKTHYGLELG-----KSSEDPQA------SEKV 134
Query: 366 ARKYLARQRLAKVEGALXEQFHTGRLLACVASRPGQCGRADGYILXGKELEFY 524
A A V L +QF +GRLLAC++SRPGQCGR DGY+L G+EL FY
Sbjct: 135 A---------ALVPRTLLDQFSSGRLLACISSRPGQCGRCDGYVLEGEELNFY 178
>UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19;
Eukaryota|Rep: 40S ribosomal protein S8 - Leishmania
major
Length = 220
Score = 189 bits (461), Expect = 3e-47
Identities = 101/187 (54%), Positives = 124/187 (66%), Gaps = 13/187 (6%)
Frame = +3
Query: 6 KYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNA 185
K ELGR ANTRLG +R+ VR+RGGN K RALRLDTGNF+W SE + R++DVVYNA
Sbjct: 26 KAELGRLPANTRLGARRVSPVRARGGNFKIRALRLDTGNFAWASEAIAHRVRLLDVVYNA 85
Query: 186 SNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPL-GRKKGAKLTEAEE--------AI 338
++NELVRTKTLVKN IV VDA PF++WY HY + L KK K A E A
Sbjct: 86 TSNELVRTKTLVKNCIVAVDAAPFKRWYAKHYGIDLDADKKSTKAAVAAEKKGRKSAHAA 145
Query: 339 INK----KRSQKTARKYLARQRLAKVEGALXEQFHTGRLLACVASRPGQCGRADGYILXG 506
+K K S K R++ R+R +VE A+ +Q GR+LA + SRPGQ GRADG +L G
Sbjct: 146 ADKYDVNKASPKLQREWTRRRRNHRVEKAIADQLREGRVLARITSRPGQSGRADGILLEG 205
Query: 507 KELEFYL 527
EL+FYL
Sbjct: 206 AELQFYL 212
>UniRef50_UPI000049933B Cluster: conserved hypothetical protein;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 237
Score = 146 bits (355), Expect = 2e-34
Identities = 87/203 (42%), Positives = 119/203 (58%), Gaps = 30/203 (14%)
Frame = +3
Query: 6 KYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNA 185
K +GR ANTRLG R+H VR R G K RALRL+ GNFSW S+ T+ T+I++VVYNA
Sbjct: 26 KNTMGRQPANTRLGAIRVHDVRCRYGIIKRRALRLENGNFSWASQSITKGTKILNVVYNA 85
Query: 186 SNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEA-----EEAII--- 341
S+N+ VRT TLVK AI+ +D PFR W+ Y + K E+ E+ ++
Sbjct: 86 SDNDFVRTNTLVKGAIIEIDPAPFRLWFLKFYGKDIASTDYYKSLESATFKTEKKVVVPK 145
Query: 342 ---NKKRS---------------QKTARKYLARQ----RLAKVEGALXEQFHTGRLLACV 455
NK+++ KT +K A++ + K + AL E F +GR+LAC+
Sbjct: 146 EEENKEKTIAQQIAETQVALMNPSKTMQKKYAKKLEVLKNMKFDEALLEGFQSGRVLACI 205
Query: 456 ASRPGQCGRADGYILXGKELEFY 524
+SRPGQ G +GYIL GKEL+FY
Sbjct: 206 SSRPGQTGSVEGYILEGKELDFY 228
>UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;
Zea mays|Rep: Putative 40S ribosomal protein S8 - Zea
mays (Maize)
Length = 245
Score = 145 bits (351), Expect = 6e-34
Identities = 68/109 (62%), Positives = 85/109 (77%), Gaps = 1/109 (0%)
Frame = +3
Query: 9 YELGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNA 185
YELGR ANT+L + + VR RGGNTK+RALR DT N+SWGSE TRKTRI+DVVY A
Sbjct: 124 YELGRQPANTKLSSNKTVRRVRVRGGNTKWRALRFDTCNYSWGSEALTRKTRILDVVYIA 183
Query: 186 SNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEE 332
+NNELVRT+TLVK+AIV VDA PF+QWY +HY + +GRKK + + ++
Sbjct: 184 TNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGRKKKVSVAKKDD 232
>UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03085 protein - Schistosoma
japonicum (Blood fluke)
Length = 120
Score = 104 bits (249), Expect = 1e-21
Identities = 56/110 (50%), Positives = 72/110 (65%), Gaps = 9/110 (8%)
Frame = +3
Query: 222 KNAIVVVDATPFRQWYESHYTLPLGR-----KKGAKLT--EAEEAIINKKRSQKTARKYL 380
K+AIV + PFRQW+E+ Y LG KKG +T EE + KKRS+ +K+
Sbjct: 1 KSAIVQIGGAPFRQWFEAPYLKELGPPKVVCKKGPSVTPENPEEDFLLKKRSKSALKKFE 60
Query: 381 ARQRL--AKVEGALXEQFHTGRLLACVASRPGQCGRADGYILXGKELEFY 524
RQ L A VE +L E+F TGRLLAC++S+PGQ GRADGY+ GKELEF+
Sbjct: 61 TRQALPQANVEESLKEEFVTGRLLACISSKPGQVGRADGYLFEGKELEFF 110
>UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillardia
theta|Rep: 40S ribosomal protein S8 - Guillardia theta
(Cryptomonas phi)
Length = 178
Score = 97.9 bits (233), Expect = 1e-19
Identities = 67/170 (39%), Positives = 92/170 (54%)
Frame = +3
Query: 18 GRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNE 197
GR +NT++G + + +R RGG K RAL L GNFS+ S T K +I+ V +N S+NE
Sbjct: 30 GRQPSNTKIGRRCVVKLRVRGGGVKTRALFLSYGNFSFVSIQRTFKAKILSVAFNESSNE 89
Query: 198 LVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKY 377
LVRT TL K +IV +D + TL K+ AE+ I NK
Sbjct: 90 LVRTNTLTKGSIVYLDIAKTL----IYNTLIRNLNSNPKI--AEDTISNK---------- 133
Query: 378 LARQRLAKVEGALXEQFHTGRLLACVASRPGQCGRADGYILXGKELEFYL 527
L +Q +G++LA + SRPGQ GRADGYIL G+EL+++L
Sbjct: 134 -----------ILIDQILSGKILARICSRPGQSGRADGYILEGQELDYFL 172
>UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamblia
ATCC 50803|Rep: Ribosomal protein S8 - Giardia lamblia
ATCC 50803
Length = 174
Score = 94.7 bits (225), Expect = 1e-18
Identities = 48/94 (51%), Positives = 63/94 (67%), Gaps = 9/94 (9%)
Frame = +3
Query: 6 KYELGRPAANTRL---------GPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKT 158
KY LGR ANT+L Q+I ++R RGGN K RALRL G+F+WGS + K
Sbjct: 26 KYNLGRQPANTKLIVKVTSKKNEGQKISTIRCRGGNIKRRALRLSHGSFAWGSADISHKA 85
Query: 159 RIIDVVYNASNNELVRTKTLVKNAIVVVDATPFR 260
RI+ VVYN+++NELVRT TLVK +V +D+ PF+
Sbjct: 86 RILQVVYNSTSNELVRTNTLVKGCVVQIDSAPFK 119
Score = 44.8 bits (101), Expect = 0.001
Identities = 20/37 (54%), Positives = 25/37 (67%)
Frame = +3
Query: 414 LXEQFHTGRLLACVASRPGQCGRADGYILXGKELEFY 524
+ +Q +LA ++SRPGQ G ADGYIL G EL FY
Sbjct: 131 ILDQIRGDHILARISSRPGQVGTADGYILEGPELLFY 167
>UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitozoon
cuniculi|Rep: Ribosomal protein S8 - Encephalitozoon
cuniculi
Length = 173
Score = 81.8 bits (193), Expect = 9e-15
Identities = 36/81 (44%), Positives = 57/81 (70%)
Frame = +3
Query: 18 GRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNE 197
G ++T++G +++ VR RGGN KY+ALRLD G+F + + R +++ VVY+ S+NE
Sbjct: 30 GSQPSSTKIGERKVTPVRVRGGNRKYKALRLDMGHFKFITTGKFRMAKLLQVVYHPSSNE 89
Query: 198 LVRTKTLVKNAIVVVDATPFR 260
LVRT TL K+++V + A PF+
Sbjct: 90 LVRTNTLTKSSVVKISAEPFK 110
Score = 48.4 bits (110), Expect = 1e-04
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +3
Query: 402 VEGALXEQFHTGRLLACVASRPGQCGRADGYILXGKELEFY 524
V+ +L E F G L A + SRPGQ G A G++L G EL+FY
Sbjct: 120 VDPSLHESFEKGHLYAIITSRPGQVGMAQGHVLQGDELKFY 160
>UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces
capsulatus NAm1|Rep: Ribosomal protein S8 - Ajellomyces
capsulatus NAm1
Length = 141
Score = 81.8 bits (193), Expect = 9e-15
Identities = 36/55 (65%), Positives = 44/55 (80%)
Frame = +3
Query: 9 YELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDV 173
+E GR ANTR+GP+RIH VR+RGGN K+R LRL++GNFSWGSE RK R+I V
Sbjct: 27 FEKGRQPANTRIGPKRIHLVRTRGGNQKFRGLRLESGNFSWGSEGIARKVRVIVV 81
Score = 65.7 bits (153), Expect = 6e-10
Identities = 37/77 (48%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +3
Query: 297 RKKGAKLTEAEEAIINKKRSQKTARKYLAR-QRLAKVEGALXEQFHTGRLLACVASRPGQ 473
R + + E I K R +K AR KVE AL +QF GRL A V+SRPGQ
Sbjct: 59 RLESGNFSWGSEGIARKVRVIVVEKKQAARFAAQGKVEPALEKQFEAGRLYAVVSSRPGQ 118
Query: 474 CGRADGYILXGKELEFY 524
GR DGYIL G+EL FY
Sbjct: 119 SGRVDGYILEGEELAFY 135
>UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whole
genome shotgun sequence; n=2; Coelomata|Rep: Chromosome
undetermined SCAF13783, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 149
Score = 80.2 bits (189), Expect = 3e-14
Identities = 40/77 (51%), Positives = 47/77 (61%)
Frame = +3
Query: 297 RKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALXEQFHTGRLLACVASRPGQC 476
R+ + T EE ++NKKRS+KT +KY R AC+ASRPGQC
Sbjct: 64 RRAPSWYTPEEEEVLNKKRSKKTQKKYDERXXXXXXXXXXXXXXXXXXXXACIASRPGQC 123
Query: 477 GRADGYILXGKELEFYL 527
GRADGYIL GKELEFYL
Sbjct: 124 GRADGYILEGKELEFYL 140
>UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella
natans|Rep: Ribosomal protein S8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 176
Score = 59.3 bits (137), Expect = 5e-08
Identities = 25/67 (37%), Positives = 43/67 (64%)
Frame = +3
Query: 57 IHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIV 236
I R RGGN K++A+ L G+F W + ++ ++I+ V+YN +N +LV+ + L K I+
Sbjct: 37 IKMTRVRGGNFKFKAISLGKGSFQWKTMQLSKNSKILSVLYNQANLKLVQKRNLSKGTII 96
Query: 237 VVDATPF 257
+D+ PF
Sbjct: 97 KIDSMPF 103
>UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr14 scaffold_54, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 110
Score = 58.8 bits (136), Expect = 7e-08
Identities = 38/92 (41%), Positives = 53/92 (57%)
Frame = +3
Query: 195 ELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARK 374
ELVRT+TLVKNAI+ Q Y HY L +G KK A T ++ +++ RK
Sbjct: 31 ELVRTQTLVKNAII--------QRYLQHYGLDIGCKKKASTTPRKK----ERKGNHVVRK 78
Query: 375 YLARQRLAKVEGALXEQFHTGRLLACVASRPG 470
RQ+ K++ + EQF +GRLLA ++S PG
Sbjct: 79 LEKRQQDHKLDPHIEEQFGSGRLLAAISSYPG 110
>UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5;
Archaea|Rep: 30S ribosomal protein S8e - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 125
Score = 58.0 bits (134), Expect = 1e-07
Identities = 32/75 (42%), Positives = 44/75 (58%)
Frame = +3
Query: 12 ELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASN 191
E+GR A T +G +R VR+ GGN K RALRL+ S + T+KT+I V N+++
Sbjct: 26 EIGRAPAETHIGEERRRIVRTFGGNQKVRALRLEYATVSNPATGETKKTKIEAVEANSAD 85
Query: 192 NELVRTKTLVKNAIV 236
VR K L K AI+
Sbjct: 86 PNYVRRKLLTKGAII 100
>UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7;
Archaea|Rep: 30S ribosomal protein S8e - Picrophilus
torridus
Length = 125
Score = 53.6 bits (123), Expect = 3e-06
Identities = 26/77 (33%), Positives = 43/77 (55%)
Frame = +3
Query: 6 KYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNA 185
+YELGR TRLG + + +RS GGN+K+ LR D N + +TRK +I V N+
Sbjct: 25 RYELGREPTLTRLGDRELRKIRSYGGNSKFALLRCDYANVYNPKDKTTRKVKINTVKENS 84
Query: 186 SNNELVRTKTLVKNAIV 236
++ V+ + + ++
Sbjct: 85 ADPHYVQRNIMNRGTVI 101
>UniRef50_O58830 Cluster: 30S ribosomal protein S8e; n=6;
Archaea|Rep: 30S ribosomal protein S8e - Pyrococcus
horikoshii
Length = 127
Score = 44.8 bits (101), Expect = 0.001
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +3
Query: 6 KYELGRPAANTRLGPQ-RIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYN 182
K ELGR +NTR+ Q + +R+ GGN K R N + RK RII V+ N
Sbjct: 25 KRELGREPSNTRVAEQDKRKIIRTYGGNRKVRLTAAAYANV-FDKSGKGRKVRIIRVLEN 83
Query: 183 ASNNELVRTKTLVKNAIV 236
+N + R + K AI+
Sbjct: 84 PANRQFARRNIITKGAII 101
>UniRef50_Q0W1L5 Cluster: 30S ribosomal protein S8e; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S8e -
Uncultured methanogenic archaeon RC-I
Length = 125
Score = 41.9 bits (94), Expect = 0.009
Identities = 23/80 (28%), Positives = 36/80 (45%)
Frame = +3
Query: 6 KYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNA 185
K+ELGR +G Q++ + G +K R L+ D N + T+K ++ V N
Sbjct: 24 KFELGRDFTIPVIGAQKLKVLNVTGNGSKVRVLKSDVVNVTDPKTGKTQKVKMTTVTENP 83
Query: 186 SNNELVRTKTLVKNAIVVVD 245
+N VR L K V +
Sbjct: 84 ANKNYVRRNFLTKGTFVTTE 103
>UniRef50_P61300 Cluster: 30S ribosomal protein S8e; n=5;
Methanococcus|Rep: 30S ribosomal protein S8e -
Methanococcus maripaludis
Length = 128
Score = 41.5 bits (93), Expect = 0.012
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +3
Query: 6 KYELGRPAANTRLGPQ-RIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYN 182
K E+GRPAA T++ + + VR RG N K + + + N + +K + +V+ N
Sbjct: 25 KREMGRPAAETQVSDKIKRKIVRCRGANLKVKLEKTNYANVFDQANKVCKKVVVTNVIDN 84
Query: 183 ASNNELVRTKTLVKNAIV 236
+N +R + K AI+
Sbjct: 85 KANKHYIRRNVMTKGAII 102
>UniRef50_Q2NEU6 Cluster: 30S ribosomal protein S8e; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 30S ribosomal
protein S8e - Methanosphaera stadtmanae (strain DSM
3091)
Length = 126
Score = 41.1 bits (92), Expect = 0.015
Identities = 24/75 (32%), Positives = 37/75 (49%)
Frame = +3
Query: 12 ELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASN 191
E GR A TR+G + + +RG TK RA N + S++ ++ V+ N +N
Sbjct: 27 EFGRNPAETRIGDEVKKEIVARGNCTKTRATVAKRINVIDPKDNSSKNVEMLTVLENGAN 86
Query: 192 NELVRTKTLVKNAIV 236
+ VR + K AIV
Sbjct: 87 SHFVRRNIITKGAIV 101
>UniRef50_Q9VL72 Cluster: CG5899-PA, isoform A; n=5; Diptera|Rep:
CG5899-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 844
Score = 37.5 bits (83), Expect = 0.19
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Frame = +3
Query: 135 SECSTRKT----RIIDVVYNASNNELVRTKTLV-KNAIVVVDATPFRQWYESHYTLPLGR 299
SE ST+ T ++ + AS EL KTL K A+ ++D PF W + L R
Sbjct: 174 SEMSTKMTGQRKKVFQFMNEASLIELQSVKTLSEKKALAIIDVRPFSDWSDLRQKLESIR 233
Query: 300 KKGAKLTEAEEAIINKKRS 356
G L A+E +INK+ +
Sbjct: 234 MSGDLLNYAQE-LINKQNT 251
>UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S8e -
Methanopyrus kandleri
Length = 133
Score = 34.7 bits (76), Expect = 1.3
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +3
Query: 6 KYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDT-GNFSWGSECSTRKTRIIDVVY 179
K+E+G P T +G +R + R GGN K + L+ T N + + RI +VV
Sbjct: 25 KFEMGNPPTETLVGEERKLKERRGMGGNVK-KGLKFATHANVADPETGEVKCVRIEEVVK 83
Query: 180 NASNNELVRTKTLVKNAIV 236
N ++ R + K AI+
Sbjct: 84 NPASQYYERHGVITKGAII 102
>UniRef50_UPI0000F2B19F Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 32.7 bits (71), Expect = 5.4
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +3
Query: 318 TEAEEAIINKKRSQKTARKYLARQRLAKVEGALXEQF 428
T EE I+NKK S+K +KY ++ AK+ L E F
Sbjct: 105 TPEEEEILNKKHSKKIQKKYEEWKKKAKISLLLREHF 141
>UniRef50_Q89D60 Cluster: Blr7583 protein; n=1; Bradyrhizobium
japonicum|Rep: Blr7583 protein - Bradyrhizobium
japonicum
Length = 261
Score = 32.7 bits (71), Expect = 5.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 231 IVVVDATPFRQWYESHYTLPLGRKK 305
++ +D PFR+W + TLPLG K
Sbjct: 22 VIAIDGDPFREWQRTSRTLPLGEVK 46
>UniRef50_A5E7M6 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 620
Score = 32.7 bits (71), Expect = 5.4
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +3
Query: 246 ATPFRQWYESHYTLPLGRKKGAKLTEAE 329
ATPF Q + +HY L RKKG K+ E E
Sbjct: 374 ATPFYQTFLAHYIWQLKRKKGKKMKEDE 401
>UniRef50_A0L8H8 Cluster: DNA repair protein RecN; n=2; cellular
organisms|Rep: DNA repair protein RecN - Magnetococcus
sp. (strain MC-1)
Length = 560
Score = 32.3 bits (70), Expect = 7.1
Identities = 20/65 (30%), Positives = 29/65 (44%)
Frame = +3
Query: 249 TPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALXEQF 428
T +R WYESH L R+KG E + + +TA Y ++ ++E
Sbjct: 162 TLYRSWYESHKALEQLREKGRDAAERRAFLSFQLEELETAGVYPGEEQ--ELEHQRTRLA 219
Query: 429 HTGRL 443
H GRL
Sbjct: 220 HAGRL 224
>UniRef50_Q962J8 Cluster: PV1H14180_P; n=2; Plasmodium vivax|Rep:
PV1H14180_P - Plasmodium vivax
Length = 1011
Score = 32.3 bits (70), Expect = 7.1
Identities = 12/36 (33%), Positives = 25/36 (69%)
Frame = +3
Query: 303 KGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEG 410
+G KL EAE+ ++ +++S+ A K L ++ + ++EG
Sbjct: 586 EGGKLMEAEKKLLEEEKSRVDAEKKLMQEEMTRIEG 621
>UniRef50_A7F1W3 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 622
Score = 32.3 bits (70), Expect = 7.1
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -3
Query: 199 NSLLDALYTTSMIRVLRVEHSDPQEKLPVS 110
N L D +Y T I +R EH DP++ LP S
Sbjct: 309 NLLFDTIYATPPIARVRSEHEDPRDNLPDS 338
>UniRef50_Q10SH0 Cluster: Fizzy-related protein, putative,
expressed; n=4; Oryza sativa|Rep: Fizzy-related protein,
putative, expressed - Oryza sativa subsp. japonica
(Rice)
Length = 523
Score = 31.9 bits (69), Expect = 9.4
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +3
Query: 57 IHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIV 236
+H + + GG T R +R + C +++ ++V++ + NELV T +N I+
Sbjct: 392 LHGLLASGGGTADRCIRFWNTTTNMHLNCVDTGSQVCNLVWSKNVNELVSTHGYSQNQII 451
Query: 237 V 239
V
Sbjct: 452 V 452
>UniRef50_Q3SAD8 Cluster: Putative uncharacterized protein; n=1;
uncultured euryarchaeote Alv-FOS1|Rep: Putative
uncharacterized protein - uncultured euryarchaeote
Alv-FOS1
Length = 484
Score = 31.9 bits (69), Expect = 9.4
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +3
Query: 63 SVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAI 233
+V++ G + + L N +W + R + + V N + N R T+VKN I
Sbjct: 229 TVKNMGTSPGWANLTFSIDNHTWSNNIYVRSEKTVHVALNVTRNGTFRLTTVVKNDI 285
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 500,562,255
Number of Sequences: 1657284
Number of extensions: 8949505
Number of successful extensions: 27912
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 27110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27893
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33455602480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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