Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_F14
(465 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4V5X9 Cluster: IP07888p; n=8; Eukaryota|Rep: IP07888p ... 210 9e-54
UniRef50_P30050 Cluster: 60S ribosomal protein L12; n=158; Eukar... 207 1e-52
UniRef50_Q59FI9 Cluster: Ribosomal protein L12 variant; n=56; Fu... 205 3e-52
UniRef50_Q01BX3 Cluster: Putative 60S ribosomal protein L12; n=1... 172 3e-42
UniRef50_Q0CUU2 Cluster: 60S ribosomal protein L12; n=1; Aspergi... 167 8e-41
UniRef50_Q38D53 Cluster: 60S ribosomal protein L12, putative; n=... 167 1e-40
UniRef50_Q6DI58 Cluster: Rpl12 protein; n=1; Mus musculus|Rep: R... 159 3e-38
UniRef50_Q4Y4I9 Cluster: 60S ribosomal protein L12, putative; n=... 153 2e-36
UniRef50_A0BE24 Cluster: Chromosome undetermined scaffold_101, w... 142 4e-33
UniRef50_Q8SR84 Cluster: 60S ribosomal protein L12; n=4; Eukaryo... 126 2e-28
UniRef50_P87267 Cluster: Putative uncharacterized protein YDR417... 117 1e-25
UniRef50_UPI0000D9D615 Cluster: PREDICTED: similar to 60S riboso... 108 7e-23
UniRef50_Q7QQ98 Cluster: GLP_243_12971_12423; n=1; Giardia lambl... 106 3e-22
UniRef50_UPI0001560E03 Cluster: PREDICTED: hypothetical protein;... 100 1e-20
UniRef50_Q6CYA6 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 86 4e-16
UniRef50_Q4YLV7 Cluster: Putative uncharacterized protein; n=1; ... 85 7e-16
UniRef50_Q3LW80 Cluster: Ribosomal protein L2; n=1; Bigelowiella... 78 1e-13
UniRef50_A7TCB3 Cluster: Predicted protein; n=1; Nematostella ve... 67 2e-10
UniRef50_A2AB20 Cluster: Kinesin family member C1; n=3; Catarrhi... 54 2e-06
UniRef50_P54030 Cluster: 50S ribosomal protein L11P; n=16; Archa... 53 3e-06
UniRef50_UPI00005BFE3C Cluster: PREDICTED: hypothetical protein;... 53 4e-06
UniRef50_P62445 Cluster: 50S ribosomal protein L11P; n=9; Archae... 51 1e-05
UniRef50_Q97BN1 Cluster: 50S ribosomal protein L11P; n=4; Euryar... 47 2e-04
UniRef50_P62446 Cluster: 50S ribosomal protein L11P; n=1; Nanoar... 47 2e-04
UniRef50_P35025 Cluster: 50S ribosomal protein L11P; n=15; Archa... 44 0.002
UniRef50_A3B9H4 Cluster: Putative uncharacterized protein; n=3; ... 38 0.14
UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1; ... 37 0.25
UniRef50_Q21QS4 Cluster: Major facilitator superfamily MFS_1; n=... 35 0.76
UniRef50_Q9VGN4 Cluster: CG31374-PB, isoform B; n=4; Sophophora|... 34 1.8
UniRef50_Q89W61 Cluster: 30S ribosomal protein S20; n=12; Alphap... 32 5.4
UniRef50_Q4T2R9 Cluster: Chromosome undetermined SCAF10201, whol... 32 7.1
UniRef50_A0D768 Cluster: Chromosome undetermined scaffold_4, who... 32 7.1
>UniRef50_Q4V5X9 Cluster: IP07888p; n=8; Eukaryota|Rep: IP07888p -
Drosophila melanogaster (Fruit fly)
Length = 307
Score = 210 bits (514), Expect = 9e-54
Identities = 97/116 (83%), Positives = 108/116 (93%)
Frame = +3
Query: 117 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 296
MPPKFDP E+K+V LRCVGGEVGATSSLAPKIGPLGLSPKK+GDDIAKATSDWKGLKITV
Sbjct: 143 MPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATSDWKGLKITV 202
Query: 297 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVXGIAKIM 464
LT+QNRQA I+VVPSAA+LII+ALKEPPRDRKKQKNIKH+GNI ED+ IA++M
Sbjct: 203 CLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILAIARVM 258
>UniRef50_P30050 Cluster: 60S ribosomal protein L12; n=158;
Eukaryota|Rep: 60S ribosomal protein L12 - Homo sapiens
(Human)
Length = 165
Score = 207 bits (505), Expect = 1e-52
Identities = 95/116 (81%), Positives = 108/116 (93%)
Frame = +3
Query: 117 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 296
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 297 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVXGIAKIM 464
+LT+QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNI+ +++ IA+ M
Sbjct: 61 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQM 116
>UniRef50_Q59FI9 Cluster: Ribosomal protein L12 variant; n=56;
Fungi/Metazoa group|Rep: Ribosomal protein L12 variant -
Homo sapiens (Human)
Length = 197
Score = 205 bits (501), Expect = 3e-52
Identities = 94/116 (81%), Positives = 107/116 (92%)
Frame = +3
Query: 117 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 296
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV
Sbjct: 33 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 92
Query: 297 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVXGIAKIM 464
+LT+QNRQAQI VVPSA+ALII+ALKEPPRDRKKQKNIKH+GNI+ +++ I + M
Sbjct: 93 KLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIVRQM 148
>UniRef50_Q01BX3 Cluster: Putative 60S ribosomal protein L12; n=1;
Ostreococcus tauri|Rep: Putative 60S ribosomal protein
L12 - Ostreococcus tauri
Length = 230
Score = 172 bits (419), Expect = 3e-42
Identities = 80/118 (67%), Positives = 100/118 (84%), Gaps = 1/118 (0%)
Frame = +3
Query: 114 KMPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATS-DWKGLKI 290
KMPPKFDPN + +R GGEVGA SSLAPKIGPLGLSPKKVG+DIAK T+ DWKGL++
Sbjct: 62 KMPPKFDPNATLEIFMRATGGEVGAASSLAPKIGPLGLSPKKVGEDIAKETAKDWKGLRV 121
Query: 291 TVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVXGIAKIM 464
TV+LTVQNRQA+++VVP+A+AL+I+ALKEP +DRKK K I H GN SL+D+ +A++M
Sbjct: 122 TVKLTVQNRQAKVSVVPTASALVIKALKEPFQDRKKVKGITHTGNCSLDDIIEVARVM 179
>UniRef50_Q0CUU2 Cluster: 60S ribosomal protein L12; n=1;
Aspergillus terreus NIH2624|Rep: 60S ribosomal protein
L12 - Aspergillus terreus (strain NIH 2624)
Length = 189
Score = 167 bits (407), Expect = 8e-41
Identities = 83/140 (59%), Positives = 105/140 (75%), Gaps = 24/140 (17%)
Frame = +3
Query: 117 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDW------- 275
MPPKFDPNE+K+++LR GGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DW
Sbjct: 1 MPPKFDPNEVKVIHLRVTGGEVGAQSALAPKIGPLGLSPKKIGEDIAKNTGDWVSTQYGC 60
Query: 276 -----------------KGLKITVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQK 404
KGL++TV+LT+QNRQA ++VVPSA++L+I+ALKEPPRDRKK+K
Sbjct: 61 CDARKEQWLTWTVSAVQKGLRVTVKLTIQNRQAAVSVVPSASSLVIKALKEPPRDRKKEK 120
Query: 405 NIKHNGNISLEDVXGIAKIM 464
NIKHN +I L+D+ IA+ M
Sbjct: 121 NIKHNKSIPLDDIIEIARTM 140
>UniRef50_Q38D53 Cluster: 60S ribosomal protein L12, putative; n=3;
Trypanosoma|Rep: 60S ribosomal protein L12, putative -
Trypanosoma brucei
Length = 219
Score = 167 bits (406), Expect = 1e-40
Identities = 77/115 (66%), Positives = 94/115 (81%)
Frame = +3
Query: 114 KMPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKIT 293
KMPPKFDPN+ V +R VGGEV AT+SLAPK+GPLGL+ KK+G+DIAK+T DWKGLK+T
Sbjct: 55 KMPPKFDPNQEITVVVRAVGGEVPATASLAPKVGPLGLNAKKIGEDIAKSTKDWKGLKVT 114
Query: 294 VQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVXGIAK 458
QL V+NR A + V PS A+ +IRALKEPPRDRKK KNIKH+GNI+ ++ IAK
Sbjct: 115 CQLRVKNRVATVIVTPSVASRLIRALKEPPRDRKKVKNIKHDGNIAFSEILKIAK 169
>UniRef50_Q6DI58 Cluster: Rpl12 protein; n=1; Mus musculus|Rep:
Rpl12 protein - Mus musculus (Mouse)
Length = 218
Score = 159 bits (386), Expect = 3e-38
Identities = 75/85 (88%), Positives = 81/85 (95%)
Frame = +3
Query: 153 VNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIA 332
V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV+LT+QNRQAQI
Sbjct: 106 VYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIE 165
Query: 333 VVPSAAALIIRALKEPPRDRKKQKN 407
VVPSA+ALII+ALKEPPRDRKKQKN
Sbjct: 166 VVPSASALIIKALKEPPRDRKKQKN 190
>UniRef50_Q4Y4I9 Cluster: 60S ribosomal protein L12, putative; n=9;
Eukaryota|Rep: 60S ribosomal protein L12, putative -
Plasmodium chabaudi
Length = 177
Score = 153 bits (370), Expect = 2e-36
Identities = 69/104 (66%), Positives = 87/104 (83%)
Frame = +3
Query: 153 VNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIA 332
V +R VGGEVGA+S L+PK+GPLGLSPKK+GDDIAK T WKGLKI V+LT+QNRQA+I
Sbjct: 25 VYIRQVGGEVGASSVLSPKLGPLGLSPKKIGDDIAKETQSWKGLKICVKLTIQNRQAKIE 84
Query: 333 VVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVXGIAKIM 464
VVP++A+++++ L E PRDRKK KNIKHNGN+ +E V IA+ M
Sbjct: 85 VVPTSASMVLKELNEAPRDRKKVKNIKHNGNLKIEQVYSIARAM 128
>UniRef50_A0BE24 Cluster: Chromosome undetermined scaffold_101,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_101,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 164
Score = 142 bits (343), Expect = 4e-33
Identities = 59/114 (51%), Positives = 86/114 (75%)
Frame = +3
Query: 117 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 296
MPPK DPNE++++N++ GGE G S+LAPK+GPLGL+PK+VGD I + WKG+++ V
Sbjct: 1 MPPKVDPNEVRLINIKVFGGEGGPASTLAPKLGPLGLNPKQVGDKIIAESGKWKGIRVMV 60
Query: 297 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVXGIAK 458
L QNR A + V+P+++AL+I+ + RDRKK KN+KHNGN++LE V +A+
Sbjct: 61 NLRCQNRNADVTVIPTSSALLIKEIGGYERDRKKTKNVKHNGNLTLEQVIKVAR 114
>UniRef50_Q8SR84 Cluster: 60S ribosomal protein L12; n=4;
Eukaryota|Rep: 60S ribosomal protein L12 -
Encephalitozoon cuniculi
Length = 166
Score = 126 bits (305), Expect = 2e-28
Identities = 64/111 (57%), Positives = 86/111 (77%), Gaps = 1/111 (0%)
Frame = +3
Query: 132 DPNEIKIVNLRCVGGEV-GATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV 308
DP + K + L+ VGGEV GAT LA ++GPLGLS K VG+DI KAT+D+K LK+ VQL +
Sbjct: 8 DP-DTKYIKLQVVGGEVPGAT--LAQRVGPLGLSSKVVGEDIKKATADYKSLKVHVQLAI 64
Query: 309 QNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVXGIAKI 461
++R+A + V PS A LII++LKEPPRDRKK+KNI HNG++ + +V IA+I
Sbjct: 65 KDRKATVEVQPSVATLIIKSLKEPPRDRKKEKNILHNGSLRMTEVVDIARI 115
>UniRef50_P87267 Cluster: Putative uncharacterized protein YDR417C
precursor; n=1; Saccharomyces cerevisiae|Rep: Putative
uncharacterized protein YDR417C precursor -
Saccharomyces cerevisiae (Baker's yeast)
Length = 123
Score = 117 bits (281), Expect = 1e-25
Identities = 59/99 (59%), Positives = 67/99 (67%)
Frame = -3
Query: 427 MLPLCLIFFCFLRSRGGSLRALMIRAAAEGTTAIWACLF*TVSCTVILRPFQSLVALAMS 248
MLPLCL F F S GGS +A+M + A+GTT ACLF + TV L P SLVALA+S
Sbjct: 1 MLPLCLTFLSFFLSLGGSFKAVMTKEEADGTTEAAACLFWIFNWTVTLIPLNSLVALAIS 60
Query: 247 SPTFLGDRPRGPILGAKDDVAPTSPPTHRKFTILISFGS 131
SPTF GD+P GPI GAK APTSPPT K+ L SFGS
Sbjct: 61 SPTFFGDKPNGPIFGAKAAEAPTSPPTALKYKYLTSFGS 99
>UniRef50_UPI0000D9D615 Cluster: PREDICTED: similar to 60S ribosomal
protein L12; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 60S ribosomal protein L12 - Macaca mulatta
Length = 268
Score = 108 bits (259), Expect = 7e-23
Identities = 64/114 (56%), Positives = 74/114 (64%)
Frame = +3
Query: 123 PKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQL 302
PKF P EIK+ LRC G EV A S+LAPKI PLGLSPK KG
Sbjct: 131 PKFGPKEIKVAYLRCTGDEVSAMSALAPKISPLGLSPK-------------KG------- 170
Query: 303 TVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVXGIAKIM 464
QAQI VVPSA+ALII+ALKEP RDRKKQKNIKH+GNI+ +++ IA+ M
Sbjct: 171 -----QAQIEVVPSASALIIKALKEPARDRKKQKNIKHSGNITSDEIVNIARQM 219
>UniRef50_Q7QQ98 Cluster: GLP_243_12971_12423; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_243_12971_12423 - Giardia lamblia
ATCC 50803
Length = 182
Score = 106 bits (254), Expect = 3e-22
Identities = 49/114 (42%), Positives = 76/114 (66%)
Frame = +3
Query: 117 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 296
MPP+ DPN ++ LR GG + A ++L PKIGP GL PK VG+ I +AT +KG+++ V
Sbjct: 1 MPPRADPNAEIVLYLRVKGGIIPAPNALGPKIGPYGLPPKVVGEKIHEATQGYKGIRVKV 60
Query: 297 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVXGIAK 458
++ +NRQ ++VVP+A++L+++AL E PR K + + H G + + V IAK
Sbjct: 61 RIVSKNRQPTVSVVPTASSLLVKALGEGPRTIPKGQPLLHTGTVKFDTVLDIAK 114
>UniRef50_UPI0001560E03 Cluster: PREDICTED: hypothetical protein;
n=1; Equus caballus|Rep: PREDICTED: hypothetical protein
- Equus caballus
Length = 169
Score = 100 bits (240), Expect = 1e-20
Identities = 53/116 (45%), Positives = 71/116 (61%)
Frame = -2
Query: 464 HDLRNAXYIFKGDVAVVFDIFLLFTVTGRLLKGSDDKGCCRGNNSYLGLSVLNCQLHSDL 285
H N + KGDV+ V +FLL +V+ L+G DD+G R + L LSVL+ Q HSD
Sbjct: 34 HLSSNVDNLIKGDVSTVLYVFLLLSVSWWFLEGFDDQGRGRRYHLNLSLSVLDRQFHSDP 93
Query: 284 ETLPVTCGLGNVITHLFRRQTKRTDFRGQR*CGTDFPADTSQIHDFNFIWVKLRGH 117
+TLP+T LG+VI HLF RQT+ + GQ GTD P Q+HDF+ + V+L H
Sbjct: 94 QTLPITSCLGDVIAHLFWRQTQGANLGGQGRRGTDVPTGAPQVHDFDLVGVELGWH 149
>UniRef50_Q6CYA6 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 202
Score = 85.8 bits (203), Expect = 4e-16
Identities = 46/118 (38%), Positives = 70/118 (59%)
Frame = -2
Query: 464 HDLRNAXYIFKGDVAVVFDIFLLFTVTGRLLKGSDDKGCCRGNNSYLGLSVLNCQLHSDL 285
H L N +F+ V VFD+ +L +V+ L+ D++ NN LSVL+ QL+S+L
Sbjct: 65 HLLSNFDDVFQLQVTTVFDVLVLLSVSWWFLQSGDNQRGSGWNNRSSSLSVLDLQLNSNL 124
Query: 284 ETLPVTCGLGNVITHLFRRQTKRTDFRGQR*CGTDFPADTSQIHDFNFIWVKLRGHFV 111
+TL + GLG++ T+L QT+ T+ Q T+F D+SQ+ +FIW+KL HFV
Sbjct: 125 DTLEILGGLGDIFTNLLWGQTQWTNLWSQSSGSTNFTTDSSQVQVLDFIWIKLWRHFV 182
>UniRef50_Q4YLV7 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 84
Score = 85.0 bits (201), Expect = 7e-16
Identities = 39/52 (75%), Positives = 45/52 (86%)
Frame = +3
Query: 150 IVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLT 305
IV +R VGGEVGA+S L+PK+GPLGLSPKK+GDDIAK T WKGLKI V+LT
Sbjct: 33 IVYIRQVGGEVGASSVLSPKLGPLGLSPKKIGDDIAKETQSWKGLKICVKLT 84
>UniRef50_Q3LW80 Cluster: Ribosomal protein L2; n=1; Bigelowiella
natans|Rep: Ribosomal protein L2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 153
Score = 77.8 bits (183), Expect = 1e-13
Identities = 34/77 (44%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Frame = +3
Query: 147 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKAT-SDWKGLKITVQLTVQNRQA 323
K+V ++ GG+V + S LA KIGP GLSPKK+G+D AK T +W G+ +T++LT+ + A
Sbjct: 7 KVVYIKSKGGQVASASVLAQKIGPYGLSPKKIGEDFAKKTKKNWDGIIVTIKLTIIKKNA 66
Query: 324 QIAVVPSAAALIIRALK 374
+ +VPS ++L+ R ++
Sbjct: 67 YLKIVPSVSSLLKREMQ 83
>UniRef50_A7TCB3 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 136
Score = 66.9 bits (156), Expect = 2e-10
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = +3
Query: 117 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGL 227
MPPKF+ NEI+ V LRC GGEVGAT+SLAPKIGPLGL
Sbjct: 1 MPPKFELNEIQYVYLRCTGGEVGATASLAPKIGPLGL 37
Score = 34.7 bits (76), Expect = 1.0
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = +3
Query: 405 NIKHNGNISLEDVXGIAKIM 464
++KHNGNI+L+DV +AK+M
Sbjct: 67 SVKHNGNITLDDVTNVAKVM 86
>UniRef50_A2AB20 Cluster: Kinesin family member C1; n=3;
Catarrhini|Rep: Kinesin family member C1 - Homo sapiens
(Human)
Length = 203
Score = 53.6 bits (123), Expect = 2e-06
Identities = 22/34 (64%), Positives = 22/34 (64%)
Frame = -1
Query: 279 PSSHLWPWQCHHPPF*ETDQEDRF*GPKMMWHRL 178
PSSH PWQCHH PF ETD R GP WHRL
Sbjct: 85 PSSHPLPWQCHHQPFLETDPGGRSWGPGQKWHRL 118
>UniRef50_P54030 Cluster: 50S ribosomal protein L11P; n=16;
Archaea|Rep: 50S ribosomal protein L11P - Methanococcus
jannaschii
Length = 161
Score = 53.2 bits (122), Expect = 3e-06
Identities = 34/108 (31%), Positives = 60/108 (55%), Gaps = 3/108 (2%)
Frame = +3
Query: 147 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV--QNRQ 320
++V + GG A L P IGPLG++ +V +I + T D++G+++ V++ V + R+
Sbjct: 4 EVVEVLVTGGRATAGPPLGPAIGPLGVNVMQVVKEINEKTKDYEGMQVPVKVIVDTETRK 63
Query: 321 AQIAV-VPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVXGIAKI 461
+I V +P ALI + L + + + GN++LE V IAK+
Sbjct: 64 FEIEVGIPPTTALIKKELGIETAAHEPRHEVV--GNLTLEQVIKIAKM 109
>UniRef50_UPI00005BFE3C Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 255
Score = 52.8 bits (121), Expect = 4e-06
Identities = 22/33 (66%), Positives = 28/33 (84%)
Frame = +3
Query: 366 ALKEPPRDRKKQKNIKHNGNISLEDVXGIAKIM 464
A KEPPRDRKKQKNIKH+GNI+ +++ IA+ M
Sbjct: 174 AKKEPPRDRKKQKNIKHSGNITFDEIVNIARQM 206
>UniRef50_P62445 Cluster: 50S ribosomal protein L11P; n=9;
Archaea|Rep: 50S ribosomal protein L11P - Methanococcus
maripaludis
Length = 159
Score = 51.2 bits (117), Expect = 1e-05
Identities = 32/108 (29%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
Frame = +3
Query: 147 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV--QNRQ 320
++V + GG+ A L P IGPLG++ +V I T D++G+ + V++ V R
Sbjct: 4 QVVEILVSGGKATAGPPLGPAIGPLGVNIMQVVQKINNMTKDYEGMSVPVKVIVDTDKRT 63
Query: 321 AQIAV-VPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVXGIAKI 461
++ V +P A+ALI + + ++ + + GNI++E + IAK+
Sbjct: 64 FEVEVGIPPASALIKKEIGIEKGSQEPKHQVA--GNITMEQIVKIAKM 109
>UniRef50_Q97BN1 Cluster: 50S ribosomal protein L11P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L11P -
Thermoplasma volcanium
Length = 158
Score = 47.2 bits (107), Expect = 2e-04
Identities = 29/99 (29%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Frame = +3
Query: 171 GGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV---QNRQAQIAV-V 338
GG+ + P +GPLGL+ +V +I + T +++G+++ V +TV + ++ +I V V
Sbjct: 11 GGKATTGPPIGPALGPLGLNVAQVVKEINEKTKEFQGMQVPVTVTVIDPETKKYEITVGV 70
Query: 339 PSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVXGIA 455
P +AL+ + L KK++ + GN +LE + +A
Sbjct: 71 PPTSALLKKELGLEKGASKKKEAVA--GNATLEQIKNVA 107
>UniRef50_P62446 Cluster: 50S ribosomal protein L11P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L11P -
Nanoarchaeum equitans
Length = 160
Score = 47.2 bits (107), Expect = 2e-04
Identities = 30/106 (28%), Positives = 58/106 (54%), Gaps = 4/106 (3%)
Frame = +3
Query: 153 VNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV--QNRQAQ 326
+ L GG+ + P + P ++P KV +I K T +++GL + V++ + + ++ +
Sbjct: 6 IRLLVTGGKATPGPPIGPALSPFKINPGKVVAEINKLTKEYEGLPVPVEIIINPETKEYK 65
Query: 327 IAV-VPSAAALIIRALKEPPRDRKKQKNIKH-NGNISLEDVXGIAK 458
I V +P +AL+++A R Q+ + GN+S++DV IAK
Sbjct: 66 IIVGLPPTSALLMKAAGVT---RGPQRTVHEWVGNVSMKDVVEIAK 108
>UniRef50_P35025 Cluster: 50S ribosomal protein L11P; n=15;
Archaea|Rep: 50S ribosomal protein L11P - Sulfolobus
acidocaldarius
Length = 170
Score = 44.0 bits (99), Expect = 0.002
Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Frame = +3
Query: 147 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLK--ITVQLTVQNRQ 320
K + + GG L P + LGL+ ++V I T+ +KG+ +T+++ ++
Sbjct: 4 KTIKIMVEGGSAKPGPPLGPTLSQLGLNVQEVVKKINDVTAQFKGMSVPVTIEIDSSTKK 63
Query: 321 AQIAV-VPSAAALIIRAL--KEPPRDRKKQKNIKHNGNISLEDVXGIA 455
I V VP+ +L+++A+ +EP D +K GN+ LE + IA
Sbjct: 64 YDIKVGVPTTTSLLLKAINAQEPSGDPAHKK----IGNLDLEQIADIA 107
>UniRef50_A3B9H4 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 260
Score = 37.5 bits (83), Expect = 0.14
Identities = 33/92 (35%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Frame = +3
Query: 153 VNLRCVGGEVGATSSLAPKIGPLGL-----SPKKVGDD-----IAKATSDWKGLKITVQL 302
V L C GGEVG+ S A + P + K VG+ +A W+ +
Sbjct: 98 VPLPCTGGEVGSKSEPAAAVAPAVIVDVKEEEKSVGNGGGGGGAQEAARWWRAGGADGGV 157
Query: 303 TVQNRQ-AQIAVVPSAAALIIRALKEPPRDRK 395
TVQ R+ A++AV P A A +RAL+ PPR K
Sbjct: 158 TVQPRERARVAVQP-ADARRLRALRAPPRQGK 188
>UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 719
Score = 36.7 bits (81), Expect = 0.25
Identities = 14/54 (25%), Positives = 31/54 (57%)
Frame = -2
Query: 428 DVAVVFDIFLLFTVTGRLLKGSDDKGCCRGNNSYLGLSVLNCQLHSDLETLPVT 267
++++ + +F LF T + + +D C G S++ L +++ +HS + T+P T
Sbjct: 288 ELSLYYKLFTLFKTTPKSEEKTDTMDCINGIRSFMMLQIISHHVHSAIRTIPTT 341
>UniRef50_Q21QS4 Cluster: Major facilitator superfamily MFS_1; n=1;
Rhodoferax ferrireducens T118|Rep: Major facilitator
superfamily MFS_1 - Rhodoferax ferrireducens (strain DSM
15236 / ATCC BAA-621 / T118)
Length = 381
Score = 35.1 bits (77), Expect = 0.76
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = -3
Query: 463 MIFAMPXTSSREMLPLCLIFFCFLRSRGGSLRALMIRAAAEGT--TAIWACLF*TVSCTV 290
M+ P TS +L L +F C G A + R A +GT TA CLF T V
Sbjct: 283 MVMLQPSTSPALVLTLVCVFGCTAIGWNGVYLAAVARQAPQGTAGTATAGCLFFTYIGVV 342
Query: 289 ILRPFQSLVALAMSS 245
+ P +++ A+ +
Sbjct: 343 VSAPLFGVLSTALGN 357
>UniRef50_Q9VGN4 Cluster: CG31374-PB, isoform B; n=4;
Sophophora|Rep: CG31374-PB, isoform B - Drosophila
melanogaster (Fruit fly)
Length = 935
Score = 33.9 bits (74), Expect = 1.8
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = +3
Query: 228 SPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKN 407
SP ++ DDI K D + K + L ++NR+AQ A I E R++ ++KN
Sbjct: 536 SPDEL-DDIDKIRDDLQSTKQMLALELRNREAQDRENKKLLAKIRTLETELEREKSREKN 594
Query: 408 IKHNGNI 428
+++ N+
Sbjct: 595 LEYGSNV 601
>UniRef50_Q89W61 Cluster: 30S ribosomal protein S20; n=12;
Alphaproteobacteria|Rep: 30S ribosomal protein S20 -
Bradyrhizobium japonicum
Length = 88
Score = 32.3 bits (70), Expect = 5.4
Identities = 23/68 (33%), Positives = 32/68 (47%)
Frame = +3
Query: 228 SPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKN 407
S KK IA+ T+ K + ++ V+N + I AAA+ A EP R Q+N
Sbjct: 6 SAKKATRKIARRTAVNKSRRTQMRGAVRNVEEAIKTGDRAAAVKALANAEPALMRAAQRN 65
Query: 408 IKHNGNIS 431
I H N S
Sbjct: 66 IIHKNNAS 73
>UniRef50_Q4T2R9 Cluster: Chromosome undetermined SCAF10201, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF10201, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 990
Score = 31.9 bits (69), Expect = 7.1
Identities = 24/86 (27%), Positives = 35/86 (40%)
Frame = +3
Query: 162 RCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIAVVP 341
RC G +G SSL P P K+ G +A D GLK + + +
Sbjct: 125 RCAGEALGK-SSLLPV--PYDAILKEPGCVVAHGLPDGVGLKKPCEYDTRTLMKILEQSH 181
Query: 342 SAAALIIRALKEPPRDRKKQKNIKHN 419
+ R ++PPRD K ++ HN
Sbjct: 182 RIQFSVTRPAEDPPRDAKTSADLNHN 207
>UniRef50_A0D768 Cluster: Chromosome undetermined scaffold_4, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_4,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 169
Score = 31.9 bits (69), Expect = 7.1
Identities = 15/47 (31%), Positives = 29/47 (61%)
Frame = +3
Query: 279 GLKITVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHN 419
GLK+ ++ + Q +V+ + AL+I A + PR+++KQK ++ N
Sbjct: 77 GLKLILENMPKEVQRNQSVIRNFLALLIHARLQQPRNKQKQKKLRLN 123
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 472,119,548
Number of Sequences: 1657284
Number of extensions: 9136801
Number of successful extensions: 24317
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 23745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24305
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 25191138900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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