Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_F11
         (657 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            26   0.91 
DQ974161-1|ABJ52801.1|  409|Anopheles gambiae serpin 2 protein.        25   2.8  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 26.2 bits (55), Expect = 0.91
 Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = +3

Query: 393  VYQRPW--ILYGTQTSSPEQVATVAAICWSAHYAKRLFETLFIH 518
            VY+ P   ++Y TQT++P+++  VA     +  A +     F H
Sbjct: 1112 VYEMPRHAVVYDTQTNNPQEIQVVAPRYIQSQPAGKQLSMFFFH 1155


>DQ974161-1|ABJ52801.1|  409|Anopheles gambiae serpin 2 protein.
          Length = 409

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 25/121 (20%), Positives = 54/121 (44%), Gaps = 1/121 (0%)
 Frame = +3

Query: 60  INIVILISTIWRLKFLSVSSAKPLGKIHVTGESSIKNVKEKIQQSVKKSLYPDRQALKLE 239
           IN   L   +W ++   V+   P  K   +     + + E +QQ   + ++    +L L 
Sbjct: 276 INSASLHQALWYMEENEVNVTLPKFKFDFS-----EQLNEPLQQVGIREIFSQNASLPLL 330

Query: 240 AKGKTLKDEDTLNSLNIQDGSKLFLKDLGPQV-SWRNVFLAEYAGPLFVYLWVYQRPWIL 416
           A+G+  +DE  ++ +  + G  + + +LG +  +   + L    G   V ++   RP+I 
Sbjct: 331 ARGRGARDEVRVSRIFQKAG--ITINELGSEAYAATEIQLVNKFGGDGVQIFNANRPFIF 388

Query: 417 Y 419
           +
Sbjct: 389 F 389


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,427
Number of Sequences: 2352
Number of extensions: 15115
Number of successful extensions: 18
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)