Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_F10
(651 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6 ... 194 1e-48
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 188 1e-46
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 176 3e-43
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 160 2e-38
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 143 4e-33
UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia... 106 5e-22
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 94 2e-18
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 93 5e-18
UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep... 91 2e-17
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 90 4e-17
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 90 5e-17
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 88 1e-16
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 88 1e-16
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 87 3e-16
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 87 3e-16
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 87 3e-16
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 87 5e-16
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 87 5e-16
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 86 6e-16
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 86 8e-16
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 86 8e-16
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 85 1e-15
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 85 1e-15
UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA heli... 85 1e-15
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 85 1e-15
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 85 2e-15
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 85 2e-15
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 84 2e-15
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 84 2e-15
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 84 2e-15
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 84 3e-15
UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole... 83 4e-15
UniRef50_Q4S1T3 Cluster: Chromosome undetermined SCAF14764, whol... 83 6e-15
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 83 6e-15
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 83 6e-15
UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio "Eu... 83 7e-15
UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4; Ascomy... 83 7e-15
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 83 7e-15
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 82 1e-14
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 82 1e-14
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 82 1e-14
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 82 1e-14
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 82 1e-14
UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1; ... 82 1e-14
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 81 2e-14
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 81 2e-14
UniRef50_Q9NY93 Cluster: Probable ATP-dependent RNA helicase DDX... 81 2e-14
UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome s... 81 3e-14
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 81 3e-14
UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyosteli... 81 3e-14
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 81 3e-14
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 81 3e-14
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 80 4e-14
UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1; P... 80 4e-14
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 80 5e-14
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 80 5e-14
UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2; ... 80 5e-14
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 80 5e-14
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 80 5e-14
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 79 7e-14
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 79 7e-14
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 79 7e-14
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 79 9e-14
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 79 9e-14
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 79 9e-14
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 79 1e-13
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 79 1e-13
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 79 1e-13
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 79 1e-13
UniRef50_Q9SW44 Cluster: DEAD-box ATP-dependent RNA helicase 16;... 79 1e-13
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 79 1e-13
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 79 1e-13
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 78 2e-13
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 78 2e-13
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 78 2e-13
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 78 2e-13
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 78 2e-13
UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein; ... 78 2e-13
UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila melanogaster... 78 2e-13
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 78 2e-13
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 78 2e-13
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 78 2e-13
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 78 2e-13
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 77 3e-13
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 77 3e-13
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 77 3e-13
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 77 3e-13
UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 77 3e-13
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 77 3e-13
UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable A... 77 4e-13
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 77 4e-13
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 77 4e-13
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 77 4e-13
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 77 4e-13
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 77 4e-13
UniRef50_A7R616 Cluster: Chromosome undetermined scaffold_1128, ... 77 4e-13
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 77 4e-13
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 77 5e-13
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 77 5e-13
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 77 5e-13
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 77 5e-13
UniRef50_A5B2H1 Cluster: Putative uncharacterized protein; n=1; ... 77 5e-13
UniRef50_Q9FNM7 Cluster: DEAD-box ATP-dependent RNA helicase 26;... 77 5e-13
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 77 5e-13
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 76 6e-13
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 76 6e-13
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 76 6e-13
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 76 6e-13
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 76 6e-13
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 76 6e-13
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 76 6e-13
UniRef50_Q2GSC7 Cluster: Putative uncharacterized protein; n=6; ... 76 6e-13
UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX... 76 6e-13
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 76 8e-13
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 76 8e-13
UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1; ... 76 8e-13
UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7; Trypanosom... 76 8e-13
UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila pseudoobscu... 76 8e-13
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 76 8e-13
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 75 1e-12
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 75 1e-12
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 75 1e-12
UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1; ... 75 1e-12
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 75 1e-12
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 75 1e-12
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 75 1e-12
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 75 1e-12
UniRef50_Q86IZ9 Cluster: Similar to Rattus norvegicus (Rat). ROK... 75 1e-12
UniRef50_Q7QWI2 Cluster: GLP_538_22840_21176; n=2; Giardia intes... 75 1e-12
UniRef50_A2DHK0 Cluster: DEAD/DEAH box helicase family protein; ... 75 1e-12
UniRef50_UPI00015A4B44 Cluster: DEAD (Asp-Glu-Ala-Asp) box polyp... 75 2e-12
UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome sh... 75 2e-12
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 75 2e-12
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 75 2e-12
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 75 2e-12
UniRef50_Q7S6F3 Cluster: ATP-dependent RNA helicase dbp-9; n=14;... 75 2e-12
UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=... 74 3e-12
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 74 3e-12
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 74 3e-12
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 74 3e-12
UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein; ... 74 3e-12
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 74 3e-12
UniRef50_UPI000051A2EE Cluster: PREDICTED: similar to Helicase C... 74 3e-12
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 74 3e-12
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 74 3e-12
UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5; T... 74 3e-12
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 74 3e-12
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 74 3e-12
UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein; ... 74 3e-12
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 74 3e-12
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 74 3e-12
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 74 3e-12
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 73 5e-12
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 73 5e-12
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 73 5e-12
UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 73 5e-12
UniRef50_Q66HG7 Cluster: Probable ATP-dependent RNA helicase DDX... 73 5e-12
UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3; F... 73 5e-12
UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-depend... 73 6e-12
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 73 6e-12
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 73 6e-12
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 73 6e-12
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 73 6e-12
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 73 6e-12
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 73 6e-12
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 73 6e-12
UniRef50_Q59H21 Cluster: ATP-dependent RNA helicase ROK1 isoform... 73 6e-12
UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX... 73 6e-12
UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX... 73 6e-12
UniRef50_A5DC85 Cluster: ATP-dependent RNA helicase DBP9; n=4; S... 73 6e-12
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 73 8e-12
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 73 8e-12
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 73 8e-12
UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein; ... 73 8e-12
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 73 8e-12
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 73 8e-12
UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia intest... 73 8e-12
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 73 8e-12
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 73 8e-12
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 73 8e-12
UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 73 8e-12
UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable A... 72 1e-11
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 72 1e-11
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 72 1e-11
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 72 1e-11
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 72 1e-11
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 72 1e-11
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 72 1e-11
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 72 1e-11
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 72 1e-11
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 72 1e-11
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 72 1e-11
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 72 1e-11
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 72 1e-11
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 72 1e-11
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 71 2e-11
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 71 2e-11
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 71 2e-11
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 71 2e-11
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 71 2e-11
UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein; ... 71 2e-11
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 71 2e-11
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 71 2e-11
UniRef50_Q9VRI0 Cluster: CG1666-PA; n=22; Eumetazoa|Rep: CG1666-... 71 2e-11
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 71 2e-11
UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82; E... 71 2e-11
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 71 2e-11
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 71 2e-11
UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 71 2e-11
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 71 2e-11
UniRef50_Q4P7M1 Cluster: ATP-dependent RNA helicase DBP9; n=2; U... 71 2e-11
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 71 3e-11
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 71 3e-11
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 71 3e-11
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 71 3e-11
UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46... 71 3e-11
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 71 3e-11
UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 70 4e-11
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 70 4e-11
UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=... 70 4e-11
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 70 4e-11
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 70 4e-11
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 70 4e-11
UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein; ... 70 4e-11
UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3; P... 70 4e-11
UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, wh... 70 4e-11
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 70 4e-11
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 70 4e-11
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 70 6e-11
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 70 6e-11
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 70 6e-11
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 70 6e-11
UniRef50_Q22LR2 Cluster: Type III restriction enzyme, res subuni... 70 6e-11
UniRef50_Q16KK0 Cluster: DEAD box ATP-dependent RNA helicase; n=... 70 6e-11
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 69 7e-11
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 69 7e-11
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 69 7e-11
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 69 7e-11
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 69 7e-11
UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2; ... 69 7e-11
UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia ... 69 7e-11
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 69 7e-11
UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8; Aconoidasida|... 69 7e-11
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 69 7e-11
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 69 7e-11
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 69 7e-11
UniRef50_P45818 Cluster: ATP-dependent RNA helicase ROK1; n=11; ... 69 7e-11
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 69 7e-11
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 69 7e-11
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 69 7e-11
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 69 7e-11
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 69 7e-11
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 69 1e-10
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 69 1e-10
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 69 1e-10
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 69 1e-10
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 69 1e-10
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 69 1e-10
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A... 69 1e-10
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 69 1e-10
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 69 1e-10
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 69 1e-10
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 69 1e-10
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 69 1e-10
UniRef50_Q5D9C4 Cluster: SJCHGC09528 protein; n=1; Schistosoma j... 69 1e-10
UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3; P... 69 1e-10
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 69 1e-10
UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111... 69 1e-10
UniRef50_Q1LSH5 Cluster: DEAD/DEAH box helicase-like protein pre... 68 2e-10
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 68 2e-10
UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Re... 68 2e-10
UniRef50_O17157 Cluster: Putative uncharacterized protein; n=3; ... 68 2e-10
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 68 2e-10
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 68 2e-10
UniRef50_A5DPU0 Cluster: ATP-dependent RNA helicase MAK5; n=1; P... 68 2e-10
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 68 2e-10
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 68 2e-10
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 68 2e-10
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 68 2e-10
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 68 2e-10
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 68 2e-10
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 67 3e-10
UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 67 3e-10
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 67 3e-10
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 67 3e-10
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 67 3e-10
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 67 3e-10
UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN ... 67 3e-10
UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;... 67 3e-10
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 67 3e-10
UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA he... 67 4e-10
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 67 4e-10
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 67 4e-10
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 67 4e-10
UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein; ... 67 4e-10
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 67 4e-10
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 67 4e-10
UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5; Clost... 67 4e-10
UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2; Ostreoc... 67 4e-10
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 67 4e-10
UniRef50_O74393 Cluster: ATP-dependent RNA helicase mak5; n=1; S... 67 4e-10
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 67 4e-10
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 66 5e-10
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 66 5e-10
UniRef50_Q9VX34 Cluster: CG5800-PA; n=2; Sophophora|Rep: CG5800-... 66 5e-10
UniRef50_Q8MYE9 Cluster: Similar to Mus musculus (Mouse). DEAD-b... 66 5e-10
UniRef50_Q5BXN2 Cluster: SJCHGC07723 protein; n=1; Schistosoma j... 66 5e-10
UniRef50_A5DUB2 Cluster: ATP-dependent RNA helicase MAK5; n=5; S... 66 5e-10
UniRef50_UPI00015B617E Cluster: PREDICTED: hypothetical protein;... 66 7e-10
UniRef50_UPI00015B6103 Cluster: PREDICTED: similar to CG8611-PB;... 66 7e-10
UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;... 66 7e-10
UniRef50_UPI0000498D2C Cluster: DEAD/DEAH box helicase; n=3; Ent... 66 7e-10
UniRef50_UPI0000498CE0 Cluster: DEAD/DEAH box helicase; n=1; Ent... 66 7e-10
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 66 7e-10
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 66 7e-10
UniRef50_Q2BGG8 Cluster: RNA helicase DbpA; n=1; Neptuniibacter ... 66 7e-10
UniRef50_Q9FQ91 Cluster: Putative chloroplast RNA helicase VDL' ... 66 7e-10
UniRef50_Q9FQ90 Cluster: Putative chloroplast RNA helicase VDL' ... 66 7e-10
UniRef50_A4IBK1 Cluster: ATP-dependent RNA helicase, putative; n... 66 7e-10
UniRef50_Q13206 Cluster: Probable ATP-dependent RNA helicase DDX... 66 7e-10
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 66 7e-10
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 66 9e-10
UniRef50_A6FEC9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 66 9e-10
UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein; ... 66 9e-10
UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD154... 66 9e-10
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 65 1e-09
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 65 1e-09
UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2; Cryptospori... 65 1e-09
UniRef50_A6PWH4 Cluster: HLA-B associated transcript 1; n=6; Hom... 65 1e-09
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 65 2e-09
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 65 2e-09
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 65 2e-09
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 65 2e-09
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 65 2e-09
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 65 2e-09
UniRef50_Q013Q9 Cluster: DEAD/DEAH box helicase, putative; n=7; ... 65 2e-09
UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6; Plasmodiu... 65 2e-09
UniRef50_Q6BZR4 Cluster: ATP-dependent RNA helicase DBP9; n=1; Y... 65 2e-09
UniRef50_UPI0000D573C1 Cluster: PREDICTED: similar to CG8611-PA,... 64 2e-09
UniRef50_Q5FLW7 Cluster: RNA helicase; n=9; Lactobacillus|Rep: R... 64 2e-09
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 64 2e-09
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 64 2e-09
UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=... 64 2e-09
UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH bo... 64 2e-09
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 64 2e-09
UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1; ... 64 2e-09
UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containin... 64 2e-09
UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase P... 64 2e-09
UniRef50_Q97WT0 Cluster: ATP-dependent RNA helicase; n=4; Sulfol... 64 2e-09
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 64 2e-09
UniRef50_A3H9E9 Cluster: DEAD/DEAH box helicase-like; n=1; Caldi... 64 2e-09
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 64 2e-09
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 64 2e-09
UniRef50_A5E572 Cluster: ATP-dependent RNA helicase DBP9; n=2; S... 64 2e-09
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 64 3e-09
UniRef50_Q7NAY1 Cluster: SrmB; n=1; Mycoplasma gallisepticum|Rep... 64 3e-09
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 64 3e-09
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 64 3e-09
UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4). EIF... 64 3e-09
UniRef50_Q54EC2 Cluster: Putative uncharacterized protein; n=1; ... 64 3e-09
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 64 3e-09
UniRef50_Q6CDS6 Cluster: ATP-dependent RNA helicase ROK1; n=1; Y... 64 3e-09
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 64 3e-09
UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX... 64 3e-09
UniRef50_Q06218 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 64 3e-09
UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14; ... 64 3e-09
UniRef50_Q2Z064 Cluster: Probable ATP-dependent RNA helicase; n=... 64 4e-09
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 64 4e-09
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 64 4e-09
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 64 4e-09
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 64 4e-09
UniRef50_A7NWH7 Cluster: Chromosome chr5 scaffold_2, whole genom... 64 4e-09
UniRef50_Q9N478 Cluster: Putative uncharacterized protein; n=2; ... 64 4e-09
UniRef50_Q84TG1 Cluster: DEAD-box ATP-dependent RNA helicase 57;... 64 4e-09
UniRef50_Q750Q4 Cluster: ATP-dependent RNA helicase MSS116, mito... 64 4e-09
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 64 4e-09
UniRef50_Q9H8H2 Cluster: Probable ATP-dependent RNA helicase DDX... 64 4e-09
UniRef50_UPI0000E49031 Cluster: PREDICTED: similar to DEAD/DEXH ... 63 5e-09
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 63 5e-09
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 63 5e-09
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 63 5e-09
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 63 5e-09
UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 63 5e-09
UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 63 5e-09
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 63 6e-09
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 63 6e-09
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 63 6e-09
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 63 6e-09
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 63 6e-09
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 63 6e-09
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 63 6e-09
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 62 8e-09
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 62 8e-09
UniRef50_Q54DN9 Cluster: Putative uncharacterized protein; n=1; ... 62 8e-09
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 62 8e-09
UniRef50_A7AR78 Cluster: DEAD box RNA helicase, putative; n=1; B... 62 8e-09
UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein; ... 62 8e-09
UniRef50_Q6FU81 Cluster: ATP-dependent RNA helicase MSS116, mito... 62 8e-09
UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX... 62 8e-09
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 62 8e-09
UniRef50_Q5KN79 Cluster: ATP-dependent RNA helicase DBP4; n=1; F... 62 8e-09
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 62 8e-09
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 62 1e-08
UniRef50_UPI0001509DC1 Cluster: DEAD/DEAH box helicase family pr... 62 1e-08
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 62 1e-08
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 62 1e-08
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 62 1e-08
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 62 1e-08
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 62 1e-08
UniRef50_Q00GM9 Cluster: Plastid RNA helicase VDL protein; n=1; ... 62 1e-08
UniRef50_Q61AN8 Cluster: Putative uncharacterized protein CBG136... 62 1e-08
UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;... 62 1e-08
UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7; A... 62 1e-08
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 62 1e-08
UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 62 1e-08
UniRef50_Q6F1J3 Cluster: ATP-dependent RNA helicase; n=4; Mollic... 62 1e-08
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 62 1e-08
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 62 1e-08
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 62 1e-08
UniRef50_Q55CP6 Cluster: Putative uncharacterized protein; n=1; ... 62 1e-08
UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia francis... 62 1e-08
UniRef50_Q6K7R9 Cluster: DEAD-box ATP-dependent RNA helicase 48;... 62 1e-08
UniRef50_Q7XJN0 Cluster: DEAD-box ATP-dependent RNA helicase 17;... 62 1e-08
UniRef50_Q5K7L2 Cluster: ATP-dependent RNA helicase DBP9; n=1; F... 62 1e-08
UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1; S... 62 1e-08
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 61 2e-08
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 61 2e-08
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 61 2e-08
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 61 2e-08
UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1; ... 61 2e-08
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 61 2e-08
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 61 2e-08
UniRef50_Q8NHQ9 Cluster: ATP-dependent RNA helicase DDX55; n=86;... 61 2e-08
UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1; U... 61 2e-08
UniRef50_Q07886 Cluster: Probable ATP-dependent RNA helicase Dbp... 61 2e-08
UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1; Ent... 61 3e-08
UniRef50_A6Q863 Cluster: ATP-dependent RNA helicase; n=1; Sulfur... 61 3e-08
UniRef50_A3I404 Cluster: Putative uncharacterized protein; n=1; ... 61 3e-08
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 61 3e-08
UniRef50_Q385S0 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 61 3e-08
UniRef50_A7AWJ7 Cluster: DEAD/DEAH box helicase and helicase con... 61 3e-08
UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, wh... 61 3e-08
UniRef50_Q3E9C3 Cluster: DEAD-box ATP-dependent RNA helicase 58,... 61 3e-08
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 61 3e-08
UniRef50_Q0U6X2 Cluster: ATP-dependent RNA helicase MAK5; n=2; P... 61 3e-08
UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2; Idioma... 60 3e-08
UniRef50_Q5C221 Cluster: SJCHGC04124 protein; n=1; Schistosoma j... 60 3e-08
UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma j... 60 3e-08
UniRef50_Q4QAV6 Cluster: ATP-dependent RNA helicase, putative; n... 60 3e-08
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 60 3e-08
UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4; ... 60 3e-08
UniRef50_Q1JSZ1 Cluster: ATP-dependent RNA helicase, putative; n... 60 3e-08
UniRef50_A7SJ72 Cluster: Predicted protein; n=1; Nematostella ve... 60 3e-08
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 60 3e-08
UniRef50_A7AWS5 Cluster: DEAD/DEAH box helicase and helicase con... 60 3e-08
UniRef50_A0CZH3 Cluster: Chromosome undetermined scaffold_32, wh... 60 3e-08
UniRef50_Q4P9E5 Cluster: ATP-dependent rRNA helicase SPB4; n=2; ... 60 3e-08
UniRef50_Q0D622 Cluster: DEAD-box ATP-dependent RNA helicase 32;... 60 3e-08
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 60 3e-08
UniRef50_Q4P3W3 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 60 3e-08
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 60 5e-08
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 60 5e-08
UniRef50_Q0S0C5 Cluster: Possible ATP-dependent RNA helicase; n=... 60 5e-08
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 60 5e-08
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 60 5e-08
UniRef50_Q016I5 Cluster: Predicted ATP-dependent RNA helicase FA... 60 5e-08
UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100, w... 60 5e-08
UniRef50_Q4P0P9 Cluster: Putative uncharacterized protein; n=1; ... 60 5e-08
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 60 5e-08
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 60 5e-08
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 60 5e-08
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 60 6e-08
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 60 6e-08
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 60 6e-08
UniRef50_Q5C2I6 Cluster: SJCHGC04550 protein; n=1; Schistosoma j... 60 6e-08
UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1; ... 60 6e-08
UniRef50_Q16YP8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 60 6e-08
UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella ve... 60 6e-08
UniRef50_A0DK92 Cluster: Chromosome undetermined scaffold_54, wh... 60 6e-08
UniRef50_Q0CMM5 Cluster: Putative uncharacterized protein; n=2; ... 60 6e-08
UniRef50_Q96XQ7 Cluster: 337aa long hypothetical ATP-dependent R... 60 6e-08
UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1; Picrop... 60 6e-08
UniRef50_O74764 Cluster: ATP-dependent rRNA helicase spb4; n=1; ... 60 6e-08
UniRef50_Q8W4E1 Cluster: DEAD-box ATP-dependent RNA helicase 47;... 60 6e-08
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 60 6e-08
UniRef50_Q1DMX8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 60 6e-08
UniRef50_P38112 Cluster: ATP-dependent RNA helicase MAK5; n=6; S... 60 6e-08
UniRef50_Q8SR01 Cluster: ATP-dependent RNA helicase DBP4; n=1; E... 60 6e-08
UniRef50_UPI0000E488C7 Cluster: PREDICTED: hypothetical protein;... 59 8e-08
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 59 8e-08
UniRef50_A4RUB4 Cluster: Predicted protein; n=2; Ostreococcus|Re... 59 8e-08
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 59 8e-08
UniRef50_Q4Q8D5 Cluster: ATP-dependent RNA helicase, putative; n... 59 8e-08
UniRef50_Q240I5 Cluster: DEAD/DEAH box helicase family protein; ... 59 8e-08
UniRef50_A7RMK9 Cluster: Predicted protein; n=1; Nematostella ve... 59 8e-08
UniRef50_A2D7F9 Cluster: DEAD/DEAH box helicase family protein; ... 59 8e-08
UniRef50_A2D755 Cluster: DEAD/DEAH box helicase family protein; ... 59 8e-08
UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;... 59 8e-08
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 59 8e-08
UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;... 59 8e-08
>UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6
protein - Homo sapiens (Human)
Length = 187
Score = 194 bits (474), Expect = 1e-48
Identities = 92/138 (66%), Positives = 112/138 (81%), Gaps = 3/138 (2%)
Frame = +3
Query: 243 NRISSSNHVGNSISQTKGEVDKSI---DDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEE 413
N++ ++N + N Q + +I DD WK LK+PPKD RIKTSDVT T+GNEFE+
Sbjct: 43 NQLKNTNTINNGTQQQAQSMTTTIKPGDD--WKKTLKLPPKDLRIKTSDVTSTKGNEFED 100
Query: 414 FCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDP 593
+CLKRELLMGIFE GWEKPSPIQE SIPIALSG+D+LARAKNGTGK+GAY IP+LE++D
Sbjct: 101 YCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDL 160
Query: 594 KKDTIQALIVVPTRELAL 647
KKD IQA+++VPTRELAL
Sbjct: 161 KKDNIQAMVIVPTRELAL 178
>UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF7914, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 502
Score = 188 bits (458), Expect = 1e-46
Identities = 84/107 (78%), Positives = 98/107 (91%)
Frame = +3
Query: 327 WKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIAL 506
WK LK+PPKD R++TSDVT T+GNEFE++CLKRELLMGIFE GWEKPSPIQE SIPIAL
Sbjct: 65 WKRNLKLPPKDNRVRTSDVTATKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIAL 124
Query: 507 SGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELAL 647
SG+D+LARAKNGTGK+GAY IP+LE++D KKD IQAL++VPTRELAL
Sbjct: 125 SGRDILARAKNGTGKSGAYLIPMLERIDLKKDHIQALVLVPTRELAL 171
>UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n=1;
Mus musculus|Rep: UPI0000566899 UniRef100 entry - Mus
musculus
Length = 449
Score = 176 bits (429), Expect = 3e-43
Identities = 88/138 (63%), Positives = 110/138 (79%), Gaps = 3/138 (2%)
Frame = +3
Query: 243 NRISSSNHVGNSISQTKGEVDKSI---DDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEE 413
N++ ++N + N Q + +I DD WK+ LK+PPKD RIKT DVT T+GNEFE+
Sbjct: 30 NQLKNTNTINNGTPQQAQSMAATIRPGDD--WKT-LKLPPKDLRIKTLDVTSTKGNEFED 86
Query: 414 FCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDP 593
+CLKRELL+GIFE GWE PS IQE SIPIALSG+D+LARAKNGTGK+GAY IP+LE++D
Sbjct: 87 YCLKRELLIGIFEMGWE-PSSIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDL 145
Query: 594 KKDTIQALIVVPTRELAL 647
KKD IQA+++VPTRELAL
Sbjct: 146 KKDNIQAMVIVPTRELAL 163
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 160 bits (389), Expect = 2e-38
Identities = 75/110 (68%), Positives = 91/110 (82%)
Frame = +3
Query: 318 DVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIP 497
D WK+ L IP KD R +T DV +T+GN FE+F LKRELLMGIFE G+EKPSPIQE +IP
Sbjct: 19 DRDWKTALNIPKKDTRPQTDDVLNTKGNTFEDFYLKRELLMGIFEAGFEKPSPIQEEAIP 78
Query: 498 IALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELAL 647
+A++G+D+LARAKNGTGKT A+ IP LE+V PK + IQALI+VPTRELAL
Sbjct: 79 VAITGRDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELAL 128
>UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4;
Dikarya|Rep: ATP-dependent RNA helicase DHH1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 625
Score = 143 bits (346), Expect = 4e-33
Identities = 66/107 (61%), Positives = 85/107 (79%)
Frame = +3
Query: 327 WKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIAL 506
WK L PPKD R +T DVT T+G+ FE+F L+RELLMGI+ G+E+PSPIQE +IP+AL
Sbjct: 12 WKQGLAAPPKDLRPQTEDVTATQGSRFEDFGLRRELLMGIYTAGFERPSPIQEQAIPMAL 71
Query: 507 SGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELAL 647
+G+D+LARAKNGTGKT ++ IP L +++ IQALI+VPTRELAL
Sbjct: 72 TGRDILARAKNGTGKTASFIIPTLNRINTSLSHIQALILVPTRELAL 118
>UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_383_7421_6129 - Giardia lamblia ATCC
50803
Length = 430
Score = 106 bits (254), Expect = 5e-22
Identities = 51/98 (52%), Positives = 75/98 (76%)
Frame = +3
Query: 354 KDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARA 533
+D RI T DV + G F LK+ELLMG+ ++G+++ +P+QE +IP L+ +DV+ARA
Sbjct: 7 RDTRITTDDVKGS-GVLFSSLGLKQELLMGLTQEGFQQLTPVQELAIPHILARRDVVARA 65
Query: 534 KNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELAL 647
KNGTGKTG++ IP+L+ V+P KD IQAL+++ TRELA+
Sbjct: 66 KNGTGKTGSFLIPILQMVNPAKDHIQALVLLHTRELAM 103
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 94.3 bits (224), Expect = 2e-18
Identities = 48/94 (51%), Positives = 66/94 (70%)
Frame = +3
Query: 366 IKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGT 545
+K+ DT+G F+ F LK +L GI E G+ PSP+Q SIPI L GKD++A+A+ GT
Sbjct: 36 LKSKHKQDTQG--FDVFGLKDFVLKGIREAGFSTPSPVQSQSIPIILQGKDLIAQAQTGT 93
Query: 546 GKTGAYCIPVLEQVDPKKDTIQALIVVPTRELAL 647
GKT A+ IP+L ++ KD I+ALI+ PTRELA+
Sbjct: 94 GKTAAFAIPILNTLNRNKD-IEALIITPTRELAM 126
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 93.1 bits (221), Expect = 5e-18
Identities = 41/81 (50%), Positives = 58/81 (71%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F EF + ELL I + G+E+P+PIQ +IP L GKDV +A+ GTGKT A+ IP++E+
Sbjct: 7 FAEFAISEELLQAIGDMGFEEPTPIQAMAIPQILDGKDVTGQAQTGTGKTAAFGIPIIER 66
Query: 585 VDPKKDTIQALIVVPTRELAL 647
+DP +QAL++ PTRELA+
Sbjct: 67 LDPDNKNVQALVLSPTRELAI 87
>UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep:
RNA helicase - Guillardia theta (Cryptomonas phi)
Length = 381
Score = 91.1 bits (216), Expect = 2e-17
Identities = 41/82 (50%), Positives = 64/82 (78%)
Frame = +3
Query: 402 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 581
+F++ LK +LL+G+ + G+E PS IQE IP+A++ KD+LAR+KNGTGKT ++ IP+L+
Sbjct: 16 KFKDLKLKNDLLLGLNDLGYEHPSLIQEKIIPLAINNKDILARSKNGTGKTLSFLIPILQ 75
Query: 582 QVDPKKDTIQALIVVPTRELAL 647
+ + I+++I+VPTRELAL
Sbjct: 76 NIYSESYGIESIILVPTRELAL 97
>UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
DHH1 - Encephalitozoon cuniculi
Length = 489
Score = 90.2 bits (214), Expect = 4e-17
Identities = 44/96 (45%), Positives = 65/96 (67%)
Frame = +3
Query: 360 RRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKN 539
+R+ + DV +T G +E L LL I + G++ PSP+Q ASIP L GK++L R+KN
Sbjct: 95 KRLLSEDVRETEGIGWESLGLGPVLLKRIRDIGYDFPSPVQVASIPHVLGGKNLLVRSKN 154
Query: 540 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELAL 647
GTGKT +Y +P+L ++ + +IQ +I+VP RELAL
Sbjct: 155 GTGKTASYIVPMLNMINSSELSIQGIILVPIRELAL 190
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 89.8 bits (213), Expect = 5e-17
Identities = 48/98 (48%), Positives = 69/98 (70%), Gaps = 4/98 (4%)
Frame = +3
Query: 366 IKTSDVTDTRGN--EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALS-GKDVLARAK 536
+ T V D N FE+F L E+L+ I +KG+EKP+ IQ+ +P ALS KD++A+A+
Sbjct: 5 VNTGSVLDETKNYERFEDFGLSEEILLAIQKKGYEKPTEIQKIVLPYALSTDKDLIAQAQ 64
Query: 537 NGTGKTGAYCIPVLEQVDPKKDT-IQALIVVPTRELAL 647
GTGKT A+ IP+LE++D K + ++A+IV PTRELAL
Sbjct: 65 TGTGKTAAFGIPLLERIDFKANKFVKAIIVTPTRELAL 102
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 88.2 bits (209), Expect = 1e-16
Identities = 46/107 (42%), Positives = 71/107 (66%), Gaps = 3/107 (2%)
Frame = +3
Query: 336 KLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGK 515
K+K+ +R++K + + FEE L R LL + + G+ +P+PIQ +IP+AL+GK
Sbjct: 171 KIKVLQSNRKLKK--IVEEELPTFEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGK 228
Query: 516 DVLARAKNGTGKTGAYCIPVLEQV---DPKKDTIQALIVVPTRELAL 647
D+LA A G+GKT A+ +PVLE++ D + I+ LI++PTRELAL
Sbjct: 229 DILASASTGSGKTAAFLLPVLERLLFRDSEYRAIRVLILLPTRELAL 275
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 88.2 bits (209), Expect = 1e-16
Identities = 37/81 (45%), Positives = 60/81 (74%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F++F L +L+ I G+E+ +PIQ +IP+ LS KDV+ +A+ GTGKT A+ IP++E+
Sbjct: 5 FQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVEK 64
Query: 585 VDPKKDTIQALIVVPTRELAL 647
++P+ IQA+++ PTRELA+
Sbjct: 65 INPESPNIQAIVIAPTRELAI 85
>UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=25; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 450
Score = 87.4 bits (207), Expect = 3e-16
Identities = 38/66 (57%), Positives = 52/66 (78%)
Frame = +3
Query: 450 EKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVP 629
E G + +PIQE +IP+ LSGKD++ +AK GTGKT A+ +P+LE++DP+ +QALIV P
Sbjct: 22 ENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPILEKIDPESSDVQALIVAP 81
Query: 630 TRELAL 647
TRELAL
Sbjct: 82 TRELAL 87
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 87.4 bits (207), Expect = 3e-16
Identities = 41/83 (49%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Frame = +3
Query: 402 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKD-VLARAKNGTGKTGAYCIPVL 578
+F++ L +L I KG+E P+PIQE IP+ LSGK+ V+ +A+ GTGKT A+ IP++
Sbjct: 3 KFQQMGLSDNILSAIDRKGYEAPTPIQEKVIPLLLSGKNNVIGQAQTGTGKTAAFGIPLI 62
Query: 579 EQVDPKKDTIQALIVVPTRELAL 647
E++D K + +QAL++ PTRELAL
Sbjct: 63 ERLDEKANDVQALVLTPTRELAL 85
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 87.0 bits (206), Expect = 3e-16
Identities = 38/81 (46%), Positives = 59/81 (72%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F+E L +E++ I G+E+ +PIQ +IP++L KDV+ +A+ GTGKT A+ IP++E+
Sbjct: 4 FQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVEK 63
Query: 585 VDPKKDTIQALIVVPTRELAL 647
V+ K +QAL+V PTRELA+
Sbjct: 64 VNVKNSAVQALVVAPTRELAI 84
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 86.6 bits (205), Expect = 5e-16
Identities = 39/81 (48%), Positives = 58/81 (71%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F + L LL + E G+E PSPIQ A+IP+ L+ +DVL +A+ GTGKT ++ +P+L +
Sbjct: 9 FADLKLSEPLLRVLQELGYESPSPIQAATIPLLLNNRDVLGQAQTGTGKTASFALPILAR 68
Query: 585 VDPKKDTIQALIVVPTRELAL 647
+D K+ T QAL++ PTRELA+
Sbjct: 69 IDIKQTTPQALVLAPTRELAI 89
>UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 434
Score = 86.6 bits (205), Expect = 5e-16
Identities = 39/80 (48%), Positives = 57/80 (71%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
FE+ L ++LL GIF G+E+PS IQ+ +I + GKDVLA+A++GTGKTG + I L++
Sbjct: 58 FEDLTLSKDLLRGIFSYGFERPSAIQQKAIKPIILGKDVLAQAQSGTGKTGTFTIGALQR 117
Query: 585 VDPKKDTIQALIVVPTRELA 644
+DP + Q +I+ P RELA
Sbjct: 118 IDPNQRKTQVIILAPVRELA 137
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 86.2 bits (204), Expect = 6e-16
Identities = 39/81 (48%), Positives = 59/81 (72%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F++ L+ ELL I E G+ +PSPIQ +IP L G+DV+ +A+ GTGKT A+ +P+L++
Sbjct: 7 FKDLPLEEELLKAIEELGFTEPSPIQSIAIPRLLEGRDVIGQAQTGTGKTAAFGLPLLQR 66
Query: 585 VDPKKDTIQALIVVPTRELAL 647
+D ++QAL++ PTRELAL
Sbjct: 67 IDAADRSVQALVLCPTRELAL 87
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 85.8 bits (203), Expect = 8e-16
Identities = 36/81 (44%), Positives = 58/81 (71%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F + L ++L + + G+E+PSPIQ +IP L GKDV+ +A+ GTGKT A+ +P++E+
Sbjct: 8 FRDLALSEKVLKALDDMGFEEPSPIQAQAIPALLQGKDVIGQAQTGTGKTAAFGVPIVER 67
Query: 585 VDPKKDTIQALIVVPTRELAL 647
+ P + +QAL++ PTRELA+
Sbjct: 68 LVPGQRAVQALVLTPTRELAI 88
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 85.8 bits (203), Expect = 8e-16
Identities = 37/82 (45%), Positives = 58/82 (70%)
Frame = +3
Query: 402 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 581
+F E L ++ + E G+E+ +PIQE +IP+A+ GKD++ +A+ GTGKT A+ IP++E
Sbjct: 3 KFTELNLTPSIVRAVHEMGFEEATPIQEQAIPLAMEGKDLIGQARTGTGKTAAFGIPMVE 62
Query: 582 QVDPKKDTIQALIVVPTRELAL 647
+ P +Q L+VVPTRELA+
Sbjct: 63 AIRPTSKGVQGLVVVPTRELAV 84
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 85.4 bits (202), Expect = 1e-15
Identities = 38/80 (47%), Positives = 55/80 (68%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F + +K E+L + E G+EKP+ IQEA +P A GKD++ +A+ GTGKT A+ IP+L
Sbjct: 3 FTQMNIKSEILKSLDEIGFEKPTKIQEAVLPFAFEGKDIIGQAQTGTGKTAAFAIPILSN 62
Query: 585 VDPKKDTIQALIVVPTRELA 644
+D + IQ L++ PTRELA
Sbjct: 63 LDCSINRIQHLVIAPTRELA 82
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 85.4 bits (202), Expect = 1e-15
Identities = 36/80 (45%), Positives = 58/80 (72%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F +F LK +L+ + + G+ +P+PIQE +IP+ L+G D++ +A+ GTGKT A+ +P+L
Sbjct: 57 FTDFNLKSDLVANLVKLGFSQPTPIQEKAIPLLLAGSDLIGQAQTGTGKTAAFGLPLLNN 116
Query: 585 VDPKKDTIQALIVVPTRELA 644
+D K +QAL++ PTRELA
Sbjct: 117 IDFSKKCVQALVLAPTRELA 136
>UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA
helicase-like protein; n=1; Oikopleura dioica|Rep:
ATP-dependent 61 kDa nucleolar RNA helicase-like protein
- Oikopleura dioica (Tunicate)
Length = 548
Score = 85.0 bits (201), Expect = 1e-15
Identities = 40/80 (50%), Positives = 58/80 (72%)
Frame = +3
Query: 402 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 581
++ F L +L GI GW++P+ IQEA +PIAL GKD+LA+A+ G+GKTGAY IP+++
Sbjct: 12 QWNSFGLDPRILSGIAALGWKEPTEIQEAGLPIALKGKDILAKARTGSGKTGAYLIPIVQ 71
Query: 582 QVDPKKDTIQALIVVPTREL 641
++ T +ALI+ PTREL
Sbjct: 72 RILHIAST-RALIIGPTREL 90
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 85.0 bits (201), Expect = 1e-15
Identities = 36/81 (44%), Positives = 57/81 (70%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F E L LL + G+E+ +PIQ +IP AL GKD++ +A+ GTGKT A+ +P+L++
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 585 VDPKKDTIQALIVVPTRELAL 647
VD K+++Q +++ PTRELA+
Sbjct: 64 VDTHKESVQGIVIAPTRELAI 84
>UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 990
Score = 84.6 bits (200), Expect = 2e-15
Identities = 39/93 (41%), Positives = 59/93 (63%)
Frame = +3
Query: 369 KTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTG 548
+TSD+ F + L +++L G+ G+ KPSPIQ SIP+ G D++ RAK+GTG
Sbjct: 14 RTSDIEIQEDVTFSQMGLSQQVLNGLLNCGFHKPSPIQHKSIPLGRCGFDLIVRAKSGTG 73
Query: 549 KTGAYCIPVLEQVDPKKDTIQALIVVPTRELAL 647
KT + I LE +D K ++Q +I+ PTRE+A+
Sbjct: 74 KTAVFGIIALEMIDIKISSVQVIILAPTREIAI 106
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 84.6 bits (200), Expect = 2e-15
Identities = 39/82 (47%), Positives = 58/82 (70%)
Frame = +3
Query: 399 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 578
NEF L ELL + E G+E +PIQ+ SIP+ L+GKD++ +AK G+GKT A+ +P+L
Sbjct: 47 NEFSTLPLSPELLTVVQELGFETLTPIQQESIPLLLAGKDIIGQAKTGSGKTAAFSLPIL 106
Query: 579 EQVDPKKDTIQALIVVPTRELA 644
+++ + +QALI+ PTRELA
Sbjct: 107 NKINLDQPLLQALILCPTRELA 128
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 84.2 bits (199), Expect = 2e-15
Identities = 49/118 (41%), Positives = 70/118 (59%), Gaps = 5/118 (4%)
Frame = +3
Query: 309 SIDDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEA 488
S D G K I P R +T+D TDT +F + +L I E+G++ P+PIQ
Sbjct: 55 SYGDTG-KISGSIHPLTYRNQTTDHTDTM--QFRSLAIIEPILQAIEEEGYQTPTPIQAE 111
Query: 489 SIPIALSGKDVLARAKNGTGKTGAYCIPVLE-----QVDPKKDTIQALIVVPTRELAL 647
+IP+ L G D+L A+ GTGKT A+ IPVL+ + + KK I++LI+ PTRELA+
Sbjct: 112 AIPLILDGNDLLGCAQTGTGKTAAFAIPVLQLLNAVKTNEKKRKIRSLIITPTRELAI 169
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 84.2 bits (199), Expect = 2e-15
Identities = 42/81 (51%), Positives = 60/81 (74%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F LK +LL I EKG+EKP+PIQ SIPIA++G D++ +A+ GTGKT ++ IP+L +
Sbjct: 6 FYSMGLKTDLLQMIDEKGFEKPTPIQVKSIPIAMAGLDLMGQAQTGTGKTASFGIPILNR 65
Query: 585 VDPKKDTIQALIVVPTRELAL 647
V K + +QAL++ PTRELA+
Sbjct: 66 V-IKGEGLQALVLCPTRELAV 85
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 84.2 bits (199), Expect = 2e-15
Identities = 41/82 (50%), Positives = 60/82 (73%)
Frame = +3
Query: 402 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 581
+FEE +K+ +L + + G+EK PIQEA+IP+ L+G+DV+ +A GTGKTGAY I +L+
Sbjct: 3 KFEELGIKQNVLDALRDMGFEKAFPIQEAAIPVLLTGRDVVGQAHTGTGKTGAYSISMLQ 62
Query: 582 QVDPKKDTIQALIVVPTRELAL 647
++ + IQ LIV PTRELA+
Sbjct: 63 EI-KEGGGIQGLIVAPTRELAV 83
>UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 400
Score = 83.8 bits (198), Expect = 3e-15
Identities = 36/81 (44%), Positives = 57/81 (70%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
+ + L E++ I +KG+ + +P+Q +IP + KDV+A+A GTGKT A+ IP++E
Sbjct: 14 YADLGLSAEVMKAIDKKGYVRATPVQAGAIPYFMEWKDVIAKAPTGTGKTFAFGIPMVEH 73
Query: 585 VDPKKDTIQALIVVPTRELAL 647
+DP+ D +QAL++ PTRELAL
Sbjct: 74 IDPESDAVQALVLAPTRELAL 94
>UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole
genome shotgun sequence; n=2; Euteleostomi|Rep:
Chromosome undetermined SCAF9757, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 215
Score = 83.4 bits (197), Expect = 4e-15
Identities = 39/86 (45%), Positives = 58/86 (67%)
Frame = +3
Query: 387 DTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYC 566
DT + F++ LK LL G++ G+EKPS IQ+ +I + G DV+A+A++GTGKT +
Sbjct: 26 DTVVDNFDDMNLKESLLRGVYAYGFEKPSAIQQRAILPCIKGHDVIAQAQSGTGKTATFV 85
Query: 567 IPVLEQVDPKKDTIQALIVVPTRELA 644
I +L+++D QALI+ PTRELA
Sbjct: 86 ISILQRIDTSLKETQALILAPTRELA 111
>UniRef50_Q4S1T3 Cluster: Chromosome undetermined SCAF14764, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14764,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 447
Score = 83.0 bits (196), Expect = 6e-15
Identities = 39/85 (45%), Positives = 59/85 (69%), Gaps = 5/85 (5%)
Frame = +3
Query: 402 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 581
+F E L LL + + GW +P+ IQE +IP+AL GKD+LARA+ G+GKT AY +PV++
Sbjct: 7 QFHEMGLDDRLLKAVADLGWSQPTLIQEKAIPLALEGKDLLARARTGSGKTAAYAVPVIQ 66
Query: 582 QVDPKKDT-----IQALIVVPTREL 641
++ K + ++ALI+VPT+EL
Sbjct: 67 RILASKQSVREQDVKALILVPTKEL 91
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 83.0 bits (196), Expect = 6e-15
Identities = 38/88 (43%), Positives = 56/88 (63%)
Frame = +3
Query: 384 TDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAY 563
T + +F E L E+ I E G+E+ SPIQ +IP+ L GKD++ A+ GTGKT A+
Sbjct: 4 TSMKKLKFSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKGKDIIGHAQTGTGKTAAF 63
Query: 564 CIPVLEQVDPKKDTIQALIVVPTRELAL 647
IP +E ++ + +QALI+ PTREL +
Sbjct: 64 AIPTIELLEVESKHLQALILCPTRELVI 91
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 83.0 bits (196), Expect = 6e-15
Identities = 41/84 (48%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
Frame = +3
Query: 399 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 578
+ F+E L + + + G+ PSPIQ A IP AL+GKDV+ +A+ GTGKT A+ IP+L
Sbjct: 44 DSFDELDLSPIMRRAVKDAGFTTPSPIQAALIPHALNGKDVIGQARTGTGKTAAFSIPIL 103
Query: 579 EQVDPKKD--TIQALIVVPTRELA 644
EQ+D +D QA+++VPTRELA
Sbjct: 104 EQLDSLEDCRDPQAIVIVPTRELA 127
>UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio
"Eukaryotic translation initiation factor 4A, isoform
1A.; n=1; Takifugu rubripes|Rep: Homolog of Brachydanio
rerio "Eukaryotic translation initiation factor 4A,
isoform 1A. - Takifugu rubripes
Length = 357
Score = 82.6 bits (195), Expect = 7e-15
Identities = 39/82 (47%), Positives = 55/82 (67%)
Frame = +3
Query: 399 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 578
+ FE L LL GIF G+EKPS IQ+ +I + G DV+A++++GTGKT Y I L
Sbjct: 21 DSFEGMMLNENLLRGIFAYGFEKPSAIQQQAIVPCIKGFDVIAQSQSGTGKTATYVIAAL 80
Query: 579 EQVDPKKDTIQALIVVPTRELA 644
+++D K+ QA+I+ PTRELA
Sbjct: 81 QRIDMMKEDTQAIILAPTRELA 102
>UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4;
Ascomycota|Rep: 2-isopropylmalate synthase - Ajellomyces
capsulatus NAm1
Length = 1466
Score = 82.6 bits (195), Expect = 7e-15
Identities = 49/127 (38%), Positives = 74/127 (58%), Gaps = 4/127 (3%)
Frame = +3
Query: 279 ISQTKGEVDKSIDDVGW-KSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEK 455
I+ G D+S D K K P+++ D+ + F+ F L R +L G+
Sbjct: 266 ITSDDGSGDESEDAAEIEKQKSFFAPEEKPSANGDLKSAKS--FQAFSLSRPILRGLTSV 323
Query: 456 GWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV--DPKK-DTIQALIVV 626
G+ P+PIQ +IP+AL GKDV+ A G+GKTGA+ IP+LE++ P+K T + I++
Sbjct: 324 GFTTPTPIQRKTIPVALLGKDVVGGAVTGSGKTGAFIIPILERLLYRPRKVPTSRVAILM 383
Query: 627 PTRELAL 647
PTRELA+
Sbjct: 384 PTRELAV 390
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 82.6 bits (195), Expect = 7e-15
Identities = 39/81 (48%), Positives = 58/81 (71%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
FEEF L+ EL+ I G+ +P+ +Q +IPIAL+G D++ R+K G+GKT AY IP++
Sbjct: 4 FEEFNLRNELIESIRGTGYSEPTEVQSMAIPIALAGSDLVVRSKTGSGKTAAYLIPIINN 63
Query: 585 VDPKKDTIQALIVVPTRELAL 647
K+ I+ALI++PTRELA+
Sbjct: 64 T-AKEKGIRALILLPTRELAV 83
>UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=3;
Thermus thermophilus|Rep: Heat resistant RNA dependent
ATPase - Thermus thermophilus
Length = 510
Score = 82.2 bits (194), Expect = 1e-14
Identities = 38/85 (44%), Positives = 61/85 (71%), Gaps = 3/85 (3%)
Frame = +3
Query: 402 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 581
EF++F LK E+L + +G P+PIQ A++P+AL GKD++ +A+ GTGKT A+ +P+ E
Sbjct: 2 EFKDFPLKPEILEALHGRGLTTPTPIQAAALPLALEGKDLIGQARTGTGKTLAFALPIAE 61
Query: 582 QVDPKKD---TIQALIVVPTRELAL 647
++ P ++ +AL++ PTRELAL
Sbjct: 62 RLAPSQERGRKPRALVLTPTRELAL 86
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 82.2 bits (194), Expect = 1e-14
Identities = 39/82 (47%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGK-DVLARAKNGTGKTGAYCIPVLE 581
F+ L E+L + +KG+ P+PIQE +IPI + GK D++ +A+ GTGKT A+ IP+LE
Sbjct: 4 FKNLGLSDEILEALEKKGFTTPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIPILE 63
Query: 582 QVDPKKDTIQALIVVPTRELAL 647
+D QALI+ PTRELA+
Sbjct: 64 TIDESSRNTQALILAPTRELAI 85
>UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n=1;
unknown|Rep: UPI00015BD198 UniRef100 entry - unknown
Length = 364
Score = 81.8 bits (193), Expect = 1e-14
Identities = 35/76 (46%), Positives = 55/76 (72%)
Frame = +3
Query: 420 LKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKK 599
L EL + + G+++P+PIQ +IP+AL G D+L +A GTGKTGA+ IP++E++ K
Sbjct: 7 LSLELQKALEDAGYKEPTPIQRDAIPLALEGYDILGQAATGTGKTGAFAIPIVEKLQKGK 66
Query: 600 DTIQALIVVPTRELAL 647
++AL++ PTRELA+
Sbjct: 67 PDVKALVLTPTRELAI 82
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 81.8 bits (193), Expect = 1e-14
Identities = 40/82 (48%), Positives = 57/82 (69%)
Frame = +3
Query: 402 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 581
+F E + E+ I E G+E+PSPIQ +IP L+G DV+ +A+ GTGKT A+ IPV+E
Sbjct: 7 KFNELQIGEEIKKAIIEMGFEEPSPIQAKAIPAILAGGDVIGQAQTGTGKTAAFGIPVVE 66
Query: 582 QVDPKKDTIQALIVVPTRELAL 647
+V + +QALI+ PTRELA+
Sbjct: 67 KVSTGRH-VQALILTPTRELAI 87
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 81.8 bits (193), Expect = 1e-14
Identities = 42/84 (50%), Positives = 58/84 (69%), Gaps = 3/84 (3%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F E L + +L + E G+EKPSPIQE +IP AL+G+DVL A+ GTGKT A+ P+L++
Sbjct: 3 FRELGLTQSILKALAELGYEKPSPIQEKAIPPALAGRDVLGCAQTGTGKTCAFAAPILQR 62
Query: 585 VD---PKKDTIQALIVVPTRELAL 647
+ P I++LI+ PTRELAL
Sbjct: 63 LGGDIPAGRPIRSLILTPTRELAL 86
>UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized protein
- Emericella nidulans (Aspergillus nidulans)
Length = 1676
Score = 81.8 bits (193), Expect = 1e-14
Identities = 44/133 (33%), Positives = 79/133 (59%), Gaps = 4/133 (3%)
Frame = +3
Query: 261 NHVGNSISQTKGEVDKSID-DVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELL 437
+H + S+ + + +D + K K P+++ + + T++ F+EF L R +L
Sbjct: 744 HHPDDEASEPDSDAESEVDAEEEAKRKAFFAPEEKTDEDA-ATNSAKRSFQEFNLSRPIL 802
Query: 438 MGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV--DPKK-DTI 608
G+ + P+PIQ+ +IP+AL GKD++ A G+GKT A+ +P+LE++ P+K T
Sbjct: 803 RGLAAVNFTNPTPIQQKTIPVALLGKDIVGSAVTGSGKTAAFVVPILERLLFRPRKVPTS 862
Query: 609 QALIVVPTRELAL 647
+ I++PTRELA+
Sbjct: 863 RVAILMPTRELAV 875
>UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase
drs-1 - Neurospora crassa
Length = 829
Score = 81.0 bits (191), Expect = 2e-14
Identities = 40/86 (46%), Positives = 59/86 (68%), Gaps = 3/86 (3%)
Frame = +3
Query: 399 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 578
+ F+E L R +L G+ G+ KP+PIQ +IPI+L GKDV+ A G+GKT A+ +P+L
Sbjct: 293 SSFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMGKDVVGGAVTGSGKTAAFVVPIL 352
Query: 579 EQV--DPKK-DTIQALIVVPTRELAL 647
E++ PKK T + +I+ PTRELA+
Sbjct: 353 ERLLYRPKKVPTTRVVILTPTRELAI 378
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 81.0 bits (191), Expect = 2e-14
Identities = 37/81 (45%), Positives = 55/81 (67%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F + LK +L + + G+EKPSPIQ IP L+G+DVL A+ G+GKT A+ +P+L+
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67
Query: 585 VDPKKDTIQALIVVPTRELAL 647
+DP+ Q L++ PTRELA+
Sbjct: 68 LDPELKAPQILVLAPTRELAV 88
>UniRef50_Q9NY93 Cluster: Probable ATP-dependent RNA helicase DDX56;
n=25; Theria|Rep: Probable ATP-dependent RNA helicase
DDX56 - Homo sapiens (Human)
Length = 547
Score = 81.0 bits (191), Expect = 2e-14
Identities = 41/93 (44%), Positives = 60/93 (64%), Gaps = 7/93 (7%)
Frame = +3
Query: 387 DTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYC 566
D+ FE L LL + + GW +P+ IQE +IP+AL GKD+LARA+ G+GKT AY
Sbjct: 3 DSEALGFEHMGLDPRLLQAVTDLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAAYA 62
Query: 567 IPVLEQVDPKKDT-------IQALIVVPTRELA 644
IP+L+ + +K T ++ L++VPT+ELA
Sbjct: 63 IPMLQLLLHRKATGPVVEQAVRGLVLVPTKELA 95
>UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=5; Euteleostomi|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 366
Score = 80.6 bits (190), Expect = 3e-14
Identities = 37/82 (45%), Positives = 57/82 (69%)
Frame = +3
Query: 399 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 578
+ F++ LK LL GI+ G+EKPS IQ+ +I + G DV+A+A++GTGKT + I +L
Sbjct: 35 DNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISIL 94
Query: 579 EQVDPKKDTIQALIVVPTRELA 644
+Q++ + QAL++ PTRELA
Sbjct: 95 QQLEIDQKETQALVLAPTRELA 116
>UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase
DbpA; n=1; Candidatus Kuenenia stuttgartiensis|Rep:
Similar to ATP-independent RNA helicase DbpA -
Candidatus Kuenenia stuttgartiensis
Length = 407
Score = 80.6 bits (190), Expect = 3e-14
Identities = 35/82 (42%), Positives = 56/82 (68%)
Frame = +3
Query: 402 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 581
+F + L ++L + + G+ + +PIQEA+ PI +G D+ A A+ G+GKT A IP+++
Sbjct: 2 KFSDLELSADILKALDKMGYNEMTPIQEATYPIIFAGHDLCALAETGSGKTAACAIPLIQ 61
Query: 582 QVDPKKDTIQALIVVPTRELAL 647
+VDP D IQ L++VPTREL +
Sbjct: 62 KVDPSLDAIQGLVIVPTRELCM 83
>UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyostelium
discoideum|Rep: DEAD-box RNA helicase - Dictyostelium
discoideum AX4
Length = 465
Score = 80.6 bits (190), Expect = 3e-14
Identities = 39/82 (47%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIAL-SGKDVLARAKNGTGKTGAYCIPVLE 581
FEE LK ELL G++ G+ KPS IQEA++PI + S +++A++++GTGKT A+ + +L
Sbjct: 72 FEELGLKPELLKGVYAMGYNKPSKIQEAALPIIIQSPNNLIAQSQSGTGKTAAFTLGMLN 131
Query: 582 QVDPKKDTIQALIVVPTRELAL 647
VDP + QA+ + PT+ELAL
Sbjct: 132 CVDPSINAPQAICISPTKELAL 153
>UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DRS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 752
Score = 80.6 bits (190), Expect = 3e-14
Identities = 45/122 (36%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Frame = +3
Query: 291 KGEVDKSIDDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKP 470
KG D ID+ + K + + F L R +L G+ G+ KP
Sbjct: 195 KGGKDDEIDEEDDSEEAKADFYAPETEGDEAKKQMYENFNSLSLSRPVLKGLASLGYVKP 254
Query: 471 SPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV--DPKK-DTIQALIVVPTREL 641
SPIQ A+IPIAL GKD++A A G+GKT A+ IP++E++ P K + + ++++PTREL
Sbjct: 255 SPIQSATIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLYKPAKIASTRVIVLLPTREL 314
Query: 642 AL 647
A+
Sbjct: 315 AI 316
>UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog;
n=20; Pasteurellaceae|Rep: Cold-shock DEAD box protein A
homolog - Haemophilus influenzae
Length = 613
Score = 80.6 bits (190), Expect = 3e-14
Identities = 36/81 (44%), Positives = 54/81 (66%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F + L +L + + G+E PSPIQ++ IP L+G DVL A+ G+GKT A+ +P+L Q
Sbjct: 7 FNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFALPLLAQ 66
Query: 585 VDPKKDTIQALIVVPTRELAL 647
+DP + Q L++ PTRELA+
Sbjct: 67 IDPSEKHPQMLVMAPTRELAI 87
>UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 684
Score = 80.2 bits (189), Expect = 4e-14
Identities = 33/82 (40%), Positives = 57/82 (69%), Gaps = 1/82 (1%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F+ L ++ L+G+ +KG+ P+PIQ +IP L G D++A A+ G+GKT AY +P++ +
Sbjct: 15 FQSMGLNKQTLLGVLKKGYRVPTPIQRKAIPAILRGNDIIAMARTGSGKTAAYLVPIINR 74
Query: 585 VDP-KKDTIQALIVVPTRELAL 647
++ + +++LI+ PTRELAL
Sbjct: 75 LETHSTEGVRSLIICPTRELAL 96
>UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1;
Phaeosphaeria nodorum|Rep: ATP-dependent RNA helicase
DBP9 - Phaeosphaeria nodorum (Septoria nodorum)
Length = 597
Score = 80.2 bits (189), Expect = 4e-14
Identities = 39/81 (48%), Positives = 55/81 (67%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F E L+ LL GI ++ W P+ +Q +IP+AL G+D+LAR+ GTGKTGAY +P+L
Sbjct: 49 FAELQLEPRLLRGIRDQKWGSPTAVQSKAIPLALQGRDILARSGTGTGKTGAYLLPILHN 108
Query: 585 VDPKKDTIQALIVVPTRELAL 647
+K +LI+VPT+ELAL
Sbjct: 109 TLLRKGK-TSLILVPTKELAL 128
>UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to
CG32344-PA - Apis mellifera
Length = 743
Score = 79.8 bits (188), Expect = 5e-14
Identities = 41/119 (34%), Positives = 72/119 (60%), Gaps = 5/119 (4%)
Frame = +3
Query: 306 KSIDDVGWKSKLKIPPKDRRIKTSDVTDT---RGNEFEEFCLKRELLMGIFEKGWEKPSP 476
K+ + VG+ +I D + +D+ + F+ L +L GI ++G++ P+P
Sbjct: 2 KNTNIVGFADPKEISDNDEENEINDIKKKVYKKSGGFQSMALSFPILKGILKRGYKIPTP 61
Query: 477 IQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTI--QALIVVPTRELAL 647
IQ +IP+AL G+D++A A+ G+GKT + IP+ E++ ++ + +ALI+ PTRELAL
Sbjct: 62 IQRKTIPLALEGRDIVAMARTGSGKTACFLIPLFEKLKIRQAKVGARALILSPTRELAL 120
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 79.8 bits (188), Expect = 5e-14
Identities = 35/72 (48%), Positives = 52/72 (72%)
Frame = +3
Query: 432 LLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQ 611
+L I G+E+PSPIQ +IP+ L+G D++ +A+ GTGKT A+ +P+L ++DP + Q
Sbjct: 34 VLAAITAVGYEEPSPIQAQAIPVILAGHDMIGQAQTGTGKTAAFALPMLSRIDPARREPQ 93
Query: 612 ALIVVPTRELAL 647
LI+ PTRELAL
Sbjct: 94 LLILAPTRELAL 105
>UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 763
Score = 79.8 bits (188), Expect = 5e-14
Identities = 42/91 (46%), Positives = 60/91 (65%), Gaps = 4/91 (4%)
Frame = +3
Query: 387 DTRGN-EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAY 563
DT N FE+ L R++L G+ P+PIQ+A IP+AL+GKD+ A A GTGKT A+
Sbjct: 143 DTSVNVSFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAF 202
Query: 564 CIPVLEQV--DPK-KDTIQALIVVPTRELAL 647
+P+LE++ PK + L++VPTRELA+
Sbjct: 203 VLPILERMIYRPKGASCTRVLVLVPTRELAI 233
>UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n=4;
Eukaryota|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 470
Score = 79.8 bits (188), Expect = 5e-14
Identities = 39/94 (41%), Positives = 60/94 (63%)
Frame = +3
Query: 366 IKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGT 545
++ D D FE+ + EL E GW++P+ IQ +IPIALSGKD++ A+ G+
Sbjct: 30 VEEDDDKDDDTPTFEDLGVCVELCRACKELGWKRPTKIQIEAIPIALSGKDIIGLAETGS 89
Query: 546 GKTGAYCIPVLEQVDPKKDTIQALIVVPTRELAL 647
GKT A+ IP+L+++ K + +LI+ PTREL+L
Sbjct: 90 GKTAAFTIPILQKLLEKPQRLFSLILAPTRELSL 123
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 79.8 bits (188), Expect = 5e-14
Identities = 37/82 (45%), Positives = 57/82 (69%)
Frame = +3
Query: 399 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 578
+ F++ LK LL GI+ G+EKPS IQ+ +I + G DV+A+A++GTGKT + I +L
Sbjct: 33 DNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISIL 92
Query: 579 EQVDPKKDTIQALIVVPTRELA 644
+Q++ + QAL++ PTRELA
Sbjct: 93 QQLEIEFKETQALVLAPTRELA 114
>UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
LD28101p - Nasonia vitripennis
Length = 782
Score = 79.4 bits (187), Expect = 7e-14
Identities = 40/100 (40%), Positives = 65/100 (65%), Gaps = 2/100 (2%)
Frame = +3
Query: 354 KDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARA 533
K+ + K ++ G F+ L + ++ GI ++G++ P+PIQ +IPIAL G+DV+A A
Sbjct: 24 KENKKKAGKKSNKSGG-FQSMGLSQSVIRGILKRGYKIPTPIQRKTIPIALDGRDVVAMA 82
Query: 534 KNGTGKTGAYCIPVLEQVDPK--KDTIQALIVVPTRELAL 647
+ G+GKT + IP+ E++ + K +ALI+ PTRELAL
Sbjct: 83 RTGSGKTACFLIPMFEKLKTRQAKTGARALILSPTRELAL 122
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 79.4 bits (187), Expect = 7e-14
Identities = 37/88 (42%), Positives = 61/88 (69%), Gaps = 8/88 (9%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F++F L E+L I E+G+ P+PIQ +IP+ LSG+DV+ A+ GTGKT ++ +P++++
Sbjct: 13 FDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQR 72
Query: 585 VDPKKDT--------IQALIVVPTRELA 644
+ P+ +T ++ALI+ PTRELA
Sbjct: 73 LLPQANTSASPARHPVRALILTPTRELA 100
>UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DEAH
box helicase-like; n=1; Clostridium phytofermentans
ISDg|Rep: Helicase-like:DbpA, RNA-binding:DEAD/DEAH box
helicase-like - Clostridium phytofermentans ISDg
Length = 483
Score = 79.4 bits (187), Expect = 7e-14
Identities = 35/82 (42%), Positives = 58/82 (70%)
Frame = +3
Query: 399 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 578
N+F ++ L E++ + + +P+PIQE IP+AL GKD++A++K G+GKT A+ IP+
Sbjct: 4 NKFTQYKLCEEIIQALSMLHYIEPTPIQEKVIPLALEGKDIIAKSKTGSGKTAAFAIPIC 63
Query: 579 EQVDPKKDTIQALIVVPTRELA 644
E + +++ QAL++ PTRELA
Sbjct: 64 ESIVWEENLPQALVLEPTRELA 85
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 79.0 bits (186), Expect = 9e-14
Identities = 34/81 (41%), Positives = 56/81 (69%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F+ F LL + +KG+ PSPIQ+A+ P + G+D++ +A+ GTGKT A+ +P+LE+
Sbjct: 73 FDGFGFSEALLKTLADKGYSDPSPIQKAAFPELMLGRDLVGQAQTGTGKTAAFALPLLER 132
Query: 585 VDPKKDTIQALIVVPTRELAL 647
++ + T Q L++ PTRELA+
Sbjct: 133 LESGQKTPQVLVLAPTRELAM 153
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 79.0 bits (186), Expect = 9e-14
Identities = 37/85 (43%), Positives = 56/85 (65%)
Frame = +3
Query: 393 RGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIP 572
+G EF EF + ++ + + G+E +PIQ ++P+ L G DV+ A+ GTGKT A+ IP
Sbjct: 2 KGLEFSEFDISGDINRALDDMGFESTTPIQALTLPVTLDGMDVVGEAQTGTGKTAAFAIP 61
Query: 573 VLEQVDPKKDTIQALIVVPTRELAL 647
VLE ++ ++ QALI+ PTREL L
Sbjct: 62 VLENLEAER-VPQALIICPTRELCL 85
>UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2;
Chaetomium globosum|Rep: ATP-dependent RNA helicase DRS1
- Chaetomium globosum (Soil fungus)
Length = 795
Score = 79.0 bits (186), Expect = 9e-14
Identities = 39/86 (45%), Positives = 58/86 (67%), Gaps = 3/86 (3%)
Frame = +3
Query: 399 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 578
+ F+ L R +L G+ G+ KP+PIQ +IPIAL GKDV+ A G+GKT A+ +P+L
Sbjct: 276 SSFQGMSLSRPILRGLTSVGFTKPTPIQAKTIPIALMGKDVVGGAVTGSGKTAAFVVPIL 335
Query: 579 EQV--DPKK-DTIQALIVVPTRELAL 647
E++ PKK T + +++ PTRELA+
Sbjct: 336 ERLLYRPKKVPTTRVVVLTPTRELAI 361
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 78.6 bits (185), Expect = 1e-13
Identities = 40/80 (50%), Positives = 51/80 (63%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F L LL I E+G+E+PSPIQE SIP L GKDVL A+ GTGKT A+ +P+L +
Sbjct: 8 FASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEGKDVLGLAQTGTGKTAAFTLPLLAR 67
Query: 585 VDPKKDTIQALIVVPTRELA 644
+ Q L++ PTRELA
Sbjct: 68 TQNEVREPQVLVLAPTRELA 87
>UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable
ATP-dependent RNA helicase - Lentisphaera araneosa
HTCC2155
Length = 482
Score = 78.6 bits (185), Expect = 1e-13
Identities = 36/80 (45%), Positives = 52/80 (65%)
Frame = +3
Query: 402 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 581
+F++ LK+ +L I+ G++KP+PIQ S+ I L G+D L RAK GTGKT A+ IP L+
Sbjct: 6 QFQDLGLKKTILSAIYTAGYKKPTPIQNKSLKIILQGQDALVRAKTGTGKTAAFAIPALQ 65
Query: 582 QVDPKKDTIQALIVVPTREL 641
+ + Q LI+ P REL
Sbjct: 66 HLRAEVQHPQVLILTPGREL 85
>UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 1091
Score = 78.6 bits (185), Expect = 1e-13
Identities = 46/150 (30%), Positives = 83/150 (55%), Gaps = 6/150 (4%)
Frame = +3
Query: 216 DKFGKMMTENRISSSNHVGNSISQTKGEVDKSIDDVGWKSKLKIPPKDRRIKTSDVTDTR 395
+K K +N+ + +++ + S K E++ S K + P D + + T ++
Sbjct: 172 EKQAKKSNKNKNADADNKKSKKSNKKEEIESS-------EKFESFPMDENNEQEEETTSK 224
Query: 396 GNE----FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAY 563
+ F+ L + LL I +KG+ P+PIQ SIP+ L G D++ A+ G+GKTGA+
Sbjct: 225 KKKKTGGFQSMDLTKNLLKAILKKGFNVPTPIQRKSIPMILDGHDIVGMARTGSGKTGAF 284
Query: 564 CIPVLEQVDPKKDT--IQALIVVPTRELAL 647
IP+++++ T ++A+I+ PTRELA+
Sbjct: 285 VIPMIQKLGDHSTTVGVRAVILSPTRELAI 314
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 78.6 bits (185), Expect = 1e-13
Identities = 35/82 (42%), Positives = 57/82 (69%)
Frame = +3
Query: 402 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 581
+F++ + E+ + + G+E+ SPIQ +IP L+ KDV +A+ GTGKT A+ IP+LE
Sbjct: 5 KFKDLNISPEIQKAVADMGFEEASPIQSLAIPQILAHKDVTGQAQTGTGKTAAFGIPLLE 64
Query: 582 QVDPKKDTIQALIVVPTRELAL 647
+D + + +QA+I+ PTRELA+
Sbjct: 65 NIDSEDNNLQAIILCPTRELAI 86
>UniRef50_Q9SW44 Cluster: DEAD-box ATP-dependent RNA helicase 16;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 16 - Arabidopsis thaliana (Mouse-ear cress)
Length = 626
Score = 78.6 bits (185), Expect = 1e-13
Identities = 45/116 (38%), Positives = 67/116 (57%), Gaps = 6/116 (5%)
Frame = +3
Query: 312 IDDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEAS 491
+D+V +++ DR + + FEE L L+ + +KG EKP+ IQ+++
Sbjct: 17 VDEVEKAEEVEEQRNDREQEEEQKEEEAPKSFEELGLDSRLIRALTKKGIEKPTLIQQSA 76
Query: 492 IPIALSGKDVLARAKNGTGKTGAYCIPVLEQ------VDPKKDTIQALIVVPTREL 641
IP L GKDV+ARAK G+GKT AY +P+L++ V KK A I+VP+REL
Sbjct: 77 IPYILEGKDVVARAKTGSGKTLAYLLPLLQKLFSADSVSKKKLAPSAFILVPSREL 132
>UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III;
n=366; root|Rep: Eukaryotic initiation factor 4A-III -
Homo sapiens (Human)
Length = 411
Score = 78.6 bits (185), Expect = 1e-13
Identities = 41/90 (45%), Positives = 61/90 (67%)
Frame = +3
Query: 378 DVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTG 557
DVT T F+ L+ +LL GI+ G+EKPS IQ+ +I + G+DV+A++++GTGKT
Sbjct: 35 DVTPT----FDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTA 90
Query: 558 AYCIPVLEQVDPKKDTIQALIVVPTRELAL 647
+ I VL+ +D + QALI+ PTRELA+
Sbjct: 91 TFSISVLQCLDIQVRETQALILAPTRELAV 120
>UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase drs1 - Schizosaccharomyces pombe (Fission
yeast)
Length = 754
Score = 78.6 bits (185), Expect = 1e-13
Identities = 40/96 (41%), Positives = 61/96 (63%), Gaps = 3/96 (3%)
Frame = +3
Query: 369 KTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTG 548
K + T + F+ L R +L G+ G+E P+ IQ+ +IP+AL GKD++ A G+G
Sbjct: 249 KEKSMMTTTHSSFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSG 308
Query: 549 KTGAYCIPVLEQV--DPKK-DTIQALIVVPTRELAL 647
KT A+ +P+LE++ PKK T + LI+ PTRELA+
Sbjct: 309 KTAAFIVPILERLLYRPKKVPTTRVLILCPTRELAM 344
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 78.2 bits (184), Expect = 2e-13
Identities = 33/82 (40%), Positives = 55/82 (67%)
Frame = +3
Query: 402 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 581
+F + L +L + E G+ P+PIQ A+IP+ L G+D L +A+ GTGKT A+ +P+L
Sbjct: 27 QFSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLN 86
Query: 582 QVDPKKDTIQALIVVPTRELAL 647
+++ + QA+++ PTRELA+
Sbjct: 87 KLNLSQYKPQAIVMAPTRELAI 108
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 78.2 bits (184), Expect = 2e-13
Identities = 33/81 (40%), Positives = 58/81 (71%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F E + +E + + + G+ P+ IQ +IP LSG+DV+ +++ GTGKT A+ +P+LE+
Sbjct: 5 FPELGISQERVEHLEKLGFTAPTNIQAQAIPQLLSGRDVVGQSQTGTGKTAAFSLPILER 64
Query: 585 VDPKKDTIQALIVVPTRELAL 647
+DP++ +QA+++ PTRELA+
Sbjct: 65 LDPQQKAVQAIVLTPTRELAI 85
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 78.2 bits (184), Expect = 2e-13
Identities = 40/84 (47%), Positives = 58/84 (69%), Gaps = 3/84 (3%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
FE L +L + ++G+ P+PIQE SIPI L GKD+L A+ GTGKT A+ IP+L++
Sbjct: 3 FENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQGKDLLGCAQTGTGKTAAFSIPILQK 62
Query: 585 V---DPKKDTIQALIVVPTRELAL 647
+ D +K I+AL++ PTRELA+
Sbjct: 63 LYKTDHRKG-IKALVLTPTRELAI 85
>UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;
Eukaryota|Rep: ATP-dependent RNA helicase DDX39 - Homo
sapiens (Human)
Length = 427
Score = 78.2 bits (184), Expect = 2e-13
Identities = 42/99 (42%), Positives = 60/99 (60%)
Frame = +3
Query: 348 PPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLA 527
PPK + IK S V+ + F +F LK ELL I + G+E PS +Q IP A+ G DVL
Sbjct: 29 PPK-KDIKGSYVS-IHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLC 86
Query: 528 RAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELA 644
+AK+G GKT + + L+Q++P + L++ TRELA
Sbjct: 87 QAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELA 125
>UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 4 SCAF14575, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 532
Score = 77.8 bits (183), Expect = 2e-13
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Frame = +3
Query: 348 PPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLA 527
P ++ + + F+ L + G+ KG++ P+PIQ +IP+ L GKDV+A
Sbjct: 20 PDTREMVRAQNKKKKKSGGFQSMGLSFPVFKGVMRKGYKVPTPIQRKTIPVILDGKDVVA 79
Query: 528 RAKNGTGKTGAYCIPVLEQVD-PKKDT-IQALIVVPTRELAL 647
A+ G+GKT A+ IP+ E++ P+ T +ALI+ PTRELAL
Sbjct: 80 MARTGSGKTAAFLIPMFERLKAPQAQTGARALILSPTRELAL 121
>UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 387
Score = 77.8 bits (183), Expect = 2e-13
Identities = 32/64 (50%), Positives = 48/64 (75%)
Frame = +3
Query: 456 GWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTR 635
G+ P+PIQE +IP+ L GKD++A + GTGKT AY IP+L ++DP+ +QA+I+ P+
Sbjct: 29 GFTAPTPIQEEAIPLILEGKDLIAESPTGTGKTLAYLIPILHRIDPESKAVQAVILAPSH 88
Query: 636 ELAL 647
ELA+
Sbjct: 89 ELAM 92
>UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila
melanogaster|Rep: CG6539-PA - Drosophila melanogaster
(Fruit fly)
Length = 1028
Score = 77.8 bits (183), Expect = 2e-13
Identities = 40/93 (43%), Positives = 60/93 (64%)
Frame = +3
Query: 369 KTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTG 548
++SDV + FEE L R LL G+ + P+ IQ A+IP+AL+ D++ ++K+GTG
Sbjct: 15 RSSDVAPGQVKTFEELRLYRNLLNGLKRNNFVTPTKIQAAAIPMALAKMDLIIQSKSGTG 74
Query: 549 KTGAYCIPVLEQVDPKKDTIQALIVVPTRELAL 647
KT Y I V++ +P + A+IVVPTRELA+
Sbjct: 75 KTLIYVIAVVQSFNPNINQPHAMIVVPTRELAI 107
>UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 784
Score = 77.8 bits (183), Expect = 2e-13
Identities = 36/87 (41%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Frame = +3
Query: 393 RGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIP 572
+G F+ L +L I + G++ P+PIQ +IP+ L G+DV+A AK G+GKTG + IP
Sbjct: 36 KGGGFQAMGLSMPILKAILKMGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTGCFLIP 95
Query: 573 VLEQVDPK--KDTIQALIVVPTRELAL 647
+ E++ + K +AL++ PTRELA+
Sbjct: 96 LFEKLKQREIKSGARALVLTPTRELAI 122
>UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 643
Score = 77.8 bits (183), Expect = 2e-13
Identities = 39/101 (38%), Positives = 63/101 (62%), Gaps = 4/101 (3%)
Frame = +3
Query: 354 KDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARA 533
KD + ++ + +F +F + + L G+ + G+ P+ IQ+ IP+ALSG+DVL A
Sbjct: 35 KDLEDRCKEIGSSEVEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAA 94
Query: 534 KNGTGKTGAYCIPVLEQVDPKK----DTIQALIVVPTRELA 644
K G+GKT A+ IP++E + +K D + AL++ PTRELA
Sbjct: 95 KTGSGKTLAFLIPIIETLWRQKWTSMDGLGALVISPTRELA 135
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 77.8 bits (183), Expect = 2e-13
Identities = 37/81 (45%), Positives = 58/81 (71%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F+E + + + G+++P+PIQ+ SIP AL G D+L +A+ GTGKTGA+ IP++E+
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPLIEK 63
Query: 585 VDPKKDTIQALIVVPTRELAL 647
V K+ +Q+LI+ PTRELA+
Sbjct: 64 VVGKQG-VQSLILAPTRELAM 83
>UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;
n=27; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
15 - Arabidopsis thaliana (Mouse-ear cress)
Length = 427
Score = 77.8 bits (183), Expect = 2e-13
Identities = 35/80 (43%), Positives = 51/80 (63%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F +F LK ELL I + G+E PS +Q IP A+ G DV+ +AK+G GKT + + L+Q
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
Query: 585 VDPKKDTIQALIVVPTRELA 644
++P + AL++ TRELA
Sbjct: 108 IEPSPGQVSALVLCHTRELA 127
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 77.4 bits (182), Expect = 3e-13
Identities = 38/84 (45%), Positives = 56/84 (66%), Gaps = 2/84 (2%)
Frame = +3
Query: 402 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 581
+F++ LK LL I + G+E+PS IQ SIP+AL G D++ +A+ GTGKT A+ ++
Sbjct: 5 KFDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAFGCAIIN 64
Query: 582 QVD--PKKDTIQALIVVPTRELAL 647
D KK + +ALI+ PTRELA+
Sbjct: 65 NADFSGKKKSPKALILAPTRELAI 88
>UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=3; Clostridium perfringens|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Clostridium
perfringens (strain ATCC 13124 / NCTC 8237 / Type A)
Length = 405
Score = 77.4 bits (182), Expect = 3e-13
Identities = 35/83 (42%), Positives = 57/83 (68%)
Frame = +3
Query: 399 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 578
++F + L E+L + G E+P+ IQE +IP L GK+V+ +A+ GTGKT AY +P++
Sbjct: 2 DKFLKLGLSEEVLKSLVGLGIEEPTDIQEKAIPEILKGKNVIGKAETGTGKTLAYLLPII 61
Query: 579 EQVDPKKDTIQALIVVPTRELAL 647
E++D K+ +QA+I+ PT EL +
Sbjct: 62 EKIDDSKNEMQAIILSPTHELGV 84
>UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
eIF4A - Encephalitozoon cuniculi
Length = 425
Score = 77.4 bits (182), Expect = 3e-13
Identities = 35/80 (43%), Positives = 56/80 (70%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
+E++ LK +LL GI+ G+E PS IQ+A+I + G+D+ A+A++GTGKTGA+ + L+
Sbjct: 40 WEDYGLKEDLLKGIYSIGFETPSFIQKAAIQPIIDGRDIRAQAQSGTGKTGAFAVAALQI 99
Query: 585 VDPKKDTIQALIVVPTRELA 644
D +D Q L++ TRE+A
Sbjct: 100 CDMSQDVTQILVLASTREIA 119
>UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX27;
n=34; Bilateria|Rep: Probable ATP-dependent RNA helicase
DDX27 - Homo sapiens (Human)
Length = 796
Score = 77.4 bits (182), Expect = 3e-13
Identities = 38/84 (45%), Positives = 58/84 (69%), Gaps = 3/84 (3%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F++ L R LL I G+++P+PIQ+A IP+ L GKD+ A A GTGKT A+ +PVLE+
Sbjct: 220 FQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLER 279
Query: 585 V--DPKKDTI-QALIVVPTRELAL 647
+ P++ + + L++VPTREL +
Sbjct: 280 LIYKPRQAPVTRVLVLVPTRELGI 303
>UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4;
Ascomycota|Rep: ATP-dependent RNA helicase DBP9 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 636
Score = 77.4 bits (182), Expect = 3e-13
Identities = 37/89 (41%), Positives = 59/89 (66%), Gaps = 6/89 (6%)
Frame = +3
Query: 399 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 578
+ F + L LL + ++ ++KP+ +Q +IP+AL G+DVLA+AK G+GKT AY +P+L
Sbjct: 43 SSFADLGLDPRLLQAVAQQSFQKPTLVQSKAIPLALEGRDVLAKAKTGSGKTAAYVLPIL 102
Query: 579 E------QVDPKKDTIQALIVVPTRELAL 647
+ Q++P I +LI+VPTREL +
Sbjct: 103 QAVLKRKQINPGATYISSLILVPTRELTV 131
>UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp10 - Schizosaccharomyces pombe (Fission
yeast)
Length = 848
Score = 77.4 bits (182), Expect = 3e-13
Identities = 48/139 (34%), Positives = 74/139 (53%), Gaps = 2/139 (1%)
Frame = +3
Query: 237 TENRISSSNHVGNSISQTKGEVDKSIDDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEF 416
T+N+ +VG ++S +D G K+ +RR K N F+
Sbjct: 25 TDNQKDKHENVGENVSD---------EDDGNYIASKLLESNRRTKGKKGNGKASN-FQSM 74
Query: 417 CLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDP- 593
L + LL IF+KG++ P+PIQ +IP+ L G+DV+ A+ G+GKT A+ IP++E +
Sbjct: 75 GLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIPMIEHLKST 134
Query: 594 -KKDTIQALIVVPTRELAL 647
+ALI+ P RELAL
Sbjct: 135 LANSNTRALILSPNRELAL 153
>UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3) (Regulator of steroidogenic factor 1)
(ROSF-1); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to Probable ATP-dependent RNA helicase DDX20
(DEAD box protein 20) (DEAD box protein DP 103)
(Component of gems 3) (Gemin-3) (Regulator of
steroidogenic factor 1) (ROSF-1) - Tribolium castaneum
Length = 688
Score = 77.0 bits (181), Expect = 4e-13
Identities = 38/97 (39%), Positives = 58/97 (59%)
Frame = +3
Query: 357 DRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 536
D + +T DV F L ++ G+ G++KPSPIQ +IP+ G D++ ++K
Sbjct: 10 DAKERTKDVILDENISFASLLLPDDIKQGLSVSGFKKPSPIQFKAIPLGRCGFDLIVKSK 69
Query: 537 NGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELAL 647
+GTGKT + LE V+ KD +Q LI+VPTRE+A+
Sbjct: 70 SGTGKTLVFSTIALETVNTAKDHLQVLILVPTREIAV 106
>UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4;
Clostridiales|Rep: ATP-dependent RNA helicase -
Clostridium tetani
Length = 386
Score = 77.0 bits (181), Expect = 4e-13
Identities = 33/81 (40%), Positives = 56/81 (69%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F++ L + L+ G+ ++G KP+ IQ +IP+AL KDV+ ++ G+GKT AY +P+ ++
Sbjct: 5 FDKLGLNQNLIEGLKQEGINKPTDIQIKTIPLALENKDVIGQSPTGSGKTLAYLLPIFQK 64
Query: 585 VDPKKDTIQALIVVPTRELAL 647
+D K +QA+I+ PT ELA+
Sbjct: 65 IDTSKREMQAIILAPTHELAM 85
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 77.0 bits (181), Expect = 4e-13
Identities = 37/81 (45%), Positives = 55/81 (67%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F++ L E++ I G+ + +PIQE +IPI ++GKD+ +A+ GTGKT A+ IP +E
Sbjct: 3 FKDLGLSPEVVEAIESIGYSEATPIQEKTIPILMTGKDLTGQAQTGTGKTAAFGIPAIEH 62
Query: 585 VDPKKDTIQALIVVPTRELAL 647
VD + Q+LI+ PTRELAL
Sbjct: 63 VDISINQTQSLILCPTRELAL 83
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 77.0 bits (181), Expect = 4e-13
Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
Frame = +3
Query: 384 TDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAY 563
T N FE L L+ + G+E+P+PIQ A++P L GKD+L A GTGKT A+
Sbjct: 31 TSAADNTFESLGLLPPLVEALSALGYEEPTPIQRAALPPLLEGKDLLGIAATGTGKTAAF 90
Query: 564 CIPVLEQVDPKKD---TIQALIVVPTRELAL 647
+P+L+++ P T AL++VPTRELA+
Sbjct: 91 SLPLLQRITPGAHAPFTASALVLVPTRELAM 121
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 77.0 bits (181), Expect = 4e-13
Identities = 36/83 (43%), Positives = 59/83 (71%)
Frame = +3
Query: 399 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 578
N+F + + E+ + + +P+P+Q +IP L+ +DV+A+A+ GTGKT A+ +P+L
Sbjct: 3 NKFAKLGISEEIENVLNKSDITEPTPVQLQAIPPLLAQRDVMAQAQTGTGKTLAFILPIL 62
Query: 579 EQVDPKKDTIQALIVVPTRELAL 647
E+V+ +K TIQALI+ PTRELA+
Sbjct: 63 ERVNVEKPTIQALIITPTRELAI 85
>UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box
family; n=6; Bacteria|Rep: ATP-dependent RNA helicase,
DEAD-box family - Sulfurovum sp. (strain NBC37-1)
Length = 492
Score = 77.0 bits (181), Expect = 4e-13
Identities = 34/83 (40%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Frame = +3
Query: 402 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 581
+F +F LK + + E G+++PSP+Q+ +IP+ L G D++A+A+ GTGKT A+ +P++
Sbjct: 2 KFTDFNLKDTIQAAVAEAGFKEPSPVQKDAIPLVLEGHDMIAQAQTGTGKTAAFGLPIMS 61
Query: 582 QVDPKKD-TIQALIVVPTRELAL 647
+ K D +++ L++VPTRELA+
Sbjct: 62 MM--KADGSVEGLVIVPTRELAM 82
>UniRef50_A7R616 Cluster: Chromosome undetermined scaffold_1128,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_1128, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 372
Score = 77.0 bits (181), Expect = 4e-13
Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 5/90 (5%)
Frame = +3
Query: 387 DTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYC 566
D FEE L+ L+ + + G EKP+ IQE +IP+ L GKDV+ARAK G+GKT AY
Sbjct: 20 DEESKTFEELGLEPSLIRALIKMGIEKPTSIQEVAIPLILEGKDVVARAKTGSGKTFAYL 79
Query: 567 IPVLEQV-----DPKKDTIQALIVVPTREL 641
+P+L+++ K A ++VPTREL
Sbjct: 80 LPLLQKLFCESESRNKLAPSAFVLVPTREL 109
>UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p -
Drosophila melanogaster (Fruit fly)
Length = 827
Score = 77.0 bits (181), Expect = 4e-13
Identities = 37/83 (44%), Positives = 58/83 (69%), Gaps = 2/83 (2%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F+ L EL+ GI ++G++ P+PIQ +IP+ L G+DV+A AK G+GKT + IP+ E+
Sbjct: 41 FQSMGLGFELIKGITKRGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTACFLIPLFEK 100
Query: 585 VDPKKDT--IQALIVVPTRELAL 647
+ ++ T +ALI+ PTRELA+
Sbjct: 101 LQRREPTKGARALILSPTRELAV 123
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 76.6 bits (180), Expect = 5e-13
Identities = 39/82 (47%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALS-GKDVLARAKNGTGKTGAYCIPVLE 581
FEE + E+ I E G+E P P+QE IP L DV+A A+ GTGKT A+ +P+L+
Sbjct: 4 FEELGVSPEIRKAIEEMGYENPMPVQEEVIPYLLGENNDVVALAQTGTGKTAAFGLPLLQ 63
Query: 582 QVDPKKDTIQALIVVPTRELAL 647
Q+D K Q+LI+ PTREL L
Sbjct: 64 QIDVKNRVPQSLILCPTRELCL 85
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 76.6 bits (180), Expect = 5e-13
Identities = 35/83 (42%), Positives = 52/83 (62%)
Frame = +3
Query: 399 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 578
+ F F L + + + PSPIQ +IP+ L G+D +A A+ GTGKT A+ +P+L
Sbjct: 6 SNFSTFNFSNALNKALEDMKFITPSPIQAQTIPLILQGRDAIALAQTGTGKTAAFALPIL 65
Query: 579 EQVDPKKDTIQALIVVPTRELAL 647
+ + P+ T QALI+ PTRELA+
Sbjct: 66 QNLSPEISTTQALILAPTRELAI 88
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 76.6 bits (180), Expect = 5e-13
Identities = 38/82 (46%), Positives = 55/82 (67%)
Frame = +3
Query: 402 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 581
EF++ L LL + + G+E P+PIQ+ +IP+ L G +++ +A GTGKT AY +PVL+
Sbjct: 3 EFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQ 62
Query: 582 QVDPKKDTIQALIVVPTRELAL 647
++ K Q LIV PTRELAL
Sbjct: 63 RIQRGKKA-QVLIVTPTRELAL 83
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 76.6 bits (180), Expect = 5e-13
Identities = 37/81 (45%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F L LL + E G+ +P+PIQ +IP A+SG+DV+A A G+GKT A+ +P+L Q
Sbjct: 3 FSSLHLHPTLLKALKELGFPRPTPIQADAIPPAMSGRDVMASAVTGSGKTAAFLLPILHQ 62
Query: 585 -VDPKKDTIQALIVVPTRELA 644
+D + T +AL++ PTRELA
Sbjct: 63 LIDRPRGTTRALVITPTRELA 83
>UniRef50_A5B2H1 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 377
Score = 76.6 bits (180), Expect = 5e-13
Identities = 34/67 (50%), Positives = 48/67 (71%)
Frame = +3
Query: 387 DTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYC 566
D FEE L+ L+ + +KG EKP+PIQE +IP+ L GKDV+ARAK G+GKT AY
Sbjct: 20 DEESKTFEELGLEPSLIRALIKKGIEKPTPIQEVAIPLILEGKDVVARAKTGSGKTFAYL 79
Query: 567 IPVLEQV 587
+P+L+++
Sbjct: 80 LPLLQKL 86
>UniRef50_Q9FNM7 Cluster: DEAD-box ATP-dependent RNA helicase 26;
n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 26 - Arabidopsis thaliana (Mouse-ear cress)
Length = 850
Score = 76.6 bits (180), Expect = 5e-13
Identities = 45/106 (42%), Positives = 63/106 (59%), Gaps = 8/106 (7%)
Frame = +3
Query: 351 PKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLAR 530
P +KTSD ++ F++F L L I + G+E + +QEA++PI L GKDVLA+
Sbjct: 367 PTGEHVKTSDSYLSK-TRFDQFPLSPLSLKAIKDAGFETMTVVQEATLPIILQGKDVLAK 425
Query: 531 AKNGTGKTGAYCIPVLEQV--------DPKKDTIQALIVVPTRELA 644
AK GTGKT A+ +P +E V D ++ I L+V PTRELA
Sbjct: 426 AKTGTGKTVAFLLPAIEAVIKSPPASRDSRQPPIIVLVVCPTRELA 471
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 76.6 bits (180), Expect = 5e-13
Identities = 36/81 (44%), Positives = 53/81 (65%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F + + +L I + G+E P+ IQ A+IP ++G DV+ A+ GTGKT A+ IP+L +
Sbjct: 15 FADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLSK 74
Query: 585 VDPKKDTIQALIVVPTRELAL 647
+D QAL++VPTRELAL
Sbjct: 75 IDITSKVPQALVLVPTRELAL 95
>UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 476
Score = 76.2 bits (179), Expect = 6e-13
Identities = 36/82 (43%), Positives = 51/82 (62%)
Frame = +3
Query: 399 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 578
+ F +F LK++LL + E G+E+PS +Q IP A+ GKDVL +AK GTGKT + + VL
Sbjct: 38 SSFNDFSLKQDLLRSVKEAGFERPSEVQHQCIPNAIHGKDVLCQAKAGTGKTAVFVLSVL 97
Query: 579 EQVDPKKDTIQALIVVPTRELA 644
Q+ L++ TRELA
Sbjct: 98 NQLPDDAKPFSCLVLCHTRELA 119
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 76.2 bits (179), Expect = 6e-13
Identities = 34/83 (40%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Frame = +3
Query: 399 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 578
N F +F + +L + KG++ P+PIQ+A+IP + G+D+L +A+ GTGKT A+ +P++
Sbjct: 51 NGFLDFGFNQSILNSLSNKGYKNPTPIQKAAIPELMLGRDLLGQAQTGTGKTAAFALPLI 110
Query: 579 EQV-DPKKDTIQALIVVPTRELA 644
E++ D K+ + L++ PTRELA
Sbjct: 111 EKLADNKELNAKVLVMTPTRELA 133
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 76.2 bits (179), Expect = 6e-13
Identities = 32/81 (39%), Positives = 55/81 (67%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F++ L + + + E+G+ P+P+Q + A+ GKD++ R+K GTGKT A+ +P+LE+
Sbjct: 31 FDDMNLSEPIRLALAERGYTNPTPVQARAFRPAIEGKDLIVRSKTGTGKTAAFGLPLLEK 90
Query: 585 VDPKKDTIQALIVVPTRELAL 647
+ + ++ALI+ PTRELAL
Sbjct: 91 IPADERRVRALILCPTRELAL 111
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 76.2 bits (179), Expect = 6e-13
Identities = 36/81 (44%), Positives = 54/81 (66%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
FE+F L ++L + G+ PS +Q IP L G++++ R+K G+GKT ++ IP+ E
Sbjct: 5 FEKFKLNEKILKSLKSLGYNIPSRVQREVIPKLLKGQNLVVRSKTGSGKTASFAIPLCEN 64
Query: 585 VDPKKDTIQALIVVPTRELAL 647
++ + IQALIVVPTRELAL
Sbjct: 65 INVDYNNIQALIVVPTRELAL 85
>UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3;
Sphingobacteriales|Rep: DEAD box-related helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 437
Score = 76.2 bits (179), Expect = 6e-13
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F +F LL + G+ KP+PIQ +IP+ +S D++A A+ GTGKT AY +P+L +
Sbjct: 3 FNDFNFNSGLLDSLSSMGFNKPTPIQTEAIPVIMSNSDLVACAQTGTGKTAAYMLPILHK 62
Query: 585 -VDPKKDTIQALIVVPTRELAL 647
++ D++ L++VPTRELA+
Sbjct: 63 IIESNTDSLDTLVLVPTRELAI 84
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 76.2 bits (179), Expect = 6e-13
Identities = 38/81 (46%), Positives = 54/81 (66%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F E L E L + G+E P+PIQ +IP AL+GKDV+ A GTGKT A+ +P++++
Sbjct: 6 FAELHLSPEALAALRRAGFEHPTPIQAQAIPPALAGKDVIGTAATGTGKTAAFLLPLIDR 65
Query: 585 VDPKKDTIQALIVVPTRELAL 647
+ K T +AL++ PTRELAL
Sbjct: 66 LAGKPGT-RALVLAPTRELAL 85
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 76.2 bits (179), Expect = 6e-13
Identities = 38/91 (41%), Positives = 56/91 (61%)
Frame = +3
Query: 375 SDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKT 554
+D DT F L E+L + + G+ P+PIQ A+IP L +DV+ A+ GTGKT
Sbjct: 37 ADEEDTDTVTFASLGLPEEILAAVTDMGFRVPTPIQAAAIPPLLELRDVVGIAQTGTGKT 96
Query: 555 GAYCIPVLEQVDPKKDTIQALIVVPTRELAL 647
A+ +P+L VD + +QAL++ PTRELA+
Sbjct: 97 AAFGLPLLAIVDADERNVQALVLAPTRELAM 127
>UniRef50_Q2GSC7 Cluster: Putative uncharacterized protein; n=6;
Pezizomycotina|Rep: Putative uncharacterized protein -
Chaetomium globosum (Soil fungus)
Length = 1029
Score = 76.2 bits (179), Expect = 6e-13
Identities = 46/123 (37%), Positives = 68/123 (55%), Gaps = 5/123 (4%)
Frame = +3
Query: 291 KGEVDKSIDDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKP 470
K ++D + V SK P+ + K + F E L L+ + ++ +EKP
Sbjct: 274 KRKLDSKDEPVAATSK----PEPKPAKAEKPSTEAEPSFAELGLDPRLVQAVAKQSFEKP 329
Query: 471 SPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQA-----LIVVPTR 635
+ +Q +IP+AL G+DVL +AK G+GKT AY +PVL + +K T A LI+VPTR
Sbjct: 330 TLVQRKAIPLALQGQDVLCKAKTGSGKTAAYVLPVLSAILKRKSTDPAPFTAGLILVPTR 389
Query: 636 ELA 644
ELA
Sbjct: 390 ELA 392
>UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=9; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX20 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 761
Score = 76.2 bits (179), Expect = 6e-13
Identities = 36/95 (37%), Positives = 58/95 (61%)
Frame = +3
Query: 363 RIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNG 542
R +T DV + G EF L + +L G+ G+++PSPIQ +IP+ G D++ +AK+G
Sbjct: 14 RTRTDDVLISGGVEFSSLLLSKPVLEGLSASGFQRPSPIQLKAIPLGRCGLDLIVQAKSG 73
Query: 543 TGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELAL 647
TGKT + L+ + + T Q L++ PTRE+A+
Sbjct: 74 TGKTCVFTTIALDSLILENATTQVLVLAPTREIAV 108
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 75.8 bits (178), Expect = 8e-13
Identities = 34/84 (40%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
Frame = +3
Query: 402 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 581
+F + L ++++ + + G+E P+PIQ+ +IP LSG+DVL +A+ GTGKT A+ +P++
Sbjct: 8 DFSQLGLNQDIVDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAAFALPLIN 67
Query: 582 QVD-PKKDTI-QALIVVPTRELAL 647
+D +D Q L++ PTRELA+
Sbjct: 68 NMDLASRDRAPQVLVLAPTRELAI 91
>UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Deltaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Desulfovibrio vulgaris subsp. vulgaris
(strain DP4)
Length = 577
Score = 75.8 bits (178), Expect = 8e-13
Identities = 29/64 (45%), Positives = 49/64 (76%)
Frame = +3
Query: 456 GWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTR 635
GW+ P+Q ++P G+D++ +++ G+GKTGA+ +P+LE++DP + + QAL++VPTR
Sbjct: 56 GWQSLMPVQAHALPYLFDGRDLMVQSRTGSGKTGAFLLPLLERLDPAEASTQALVLVPTR 115
Query: 636 ELAL 647
ELAL
Sbjct: 116 ELAL 119
>UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 685
Score = 75.8 bits (178), Expect = 8e-13
Identities = 38/95 (40%), Positives = 62/95 (65%), Gaps = 5/95 (5%)
Frame = +3
Query: 372 TSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGK 551
+SD+ D FE L +L + + G++ PS +Q SIP++L GKD+LA+A+ G+GK
Sbjct: 15 SSDLIDLECT-FESMGLDNRILRALKKMGFQNPSLVQSKSIPLSLQGKDILAKARTGSGK 73
Query: 552 TGAYCIPVLEQVDPKKDT-----IQALIVVPTREL 641
T AY IP++++V K+ ++A+++VPTREL
Sbjct: 74 TAAYSIPIIQKVLMAKEKSNIKGVKAVVLVPTREL 108
>UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7;
Trypanosomatidae|Rep: RNA helicase, putative -
Leishmania major
Length = 435
Score = 75.8 bits (178), Expect = 8e-13
Identities = 38/84 (45%), Positives = 55/84 (65%), Gaps = 4/84 (4%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F++FCLK EL I E G+E PS +Q ++P A+ G D+LA+AK+G GKT + +LEQ
Sbjct: 38 FQDFCLKSELANAIRENGFEHPSEVQHQALPKAMLGADILAQAKSGMGKTAVFVFALLEQ 97
Query: 585 VDP----KKDTIQALIVVPTRELA 644
V+ +K QA+++V RELA
Sbjct: 98 VEKVPQGQKPYCQAVVLVHARELA 121
>UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila
pseudoobscura|Rep: GA19670-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 1007
Score = 75.8 bits (178), Expect = 8e-13
Identities = 36/93 (38%), Positives = 58/93 (62%)
Frame = +3
Query: 369 KTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTG 548
+TSDV + F L+R+++ G+ + + P+ IQ A+IPIAL+G D+L ++K+GTG
Sbjct: 15 RTSDVEAGQMKHFSALHLRRQVMRGLAAENFRTPTKIQAAAIPIALTGMDLLVQSKSGTG 74
Query: 549 KTGAYCIPVLEQVDPKKDTIQALIVVPTRELAL 647
KT Y + L+ + L+++PTRELAL
Sbjct: 75 KTLIYVVTALQMCSLSTQHPEVLVILPTRELAL 107
>UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55;
Eukaryota|Rep: Spliceosome RNA helicase BAT1 - Homo
sapiens (Human)
Length = 428
Score = 75.8 bits (178), Expect = 8e-13
Identities = 39/98 (39%), Positives = 58/98 (59%)
Frame = +3
Query: 351 PKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLAR 530
P + +K S V+ + F +F LK ELL I + G+E PS +Q IP A+ G DVL +
Sbjct: 30 PAKKDVKGSYVS-IHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQ 88
Query: 531 AKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELA 644
AK+G GKT + + L+Q++P + L++ TRELA
Sbjct: 89 AKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELA 126
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 75.4 bits (177), Expect = 1e-12
Identities = 36/81 (44%), Positives = 52/81 (64%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F + L+ LL + E G+E PSPIQ IP L+G D+L A+ GTGKT A+ +P+L++
Sbjct: 46 FAQLDLRAPLLDALSEIGYETPSPIQAICIPHLLAGHDLLGEAQTGTGKTAAFALPLLDR 105
Query: 585 VDPKKDTIQALIVVPTRELAL 647
+D Q L++ PTRELA+
Sbjct: 106 LDLAVKNPQVLVLAPTRELAI 126
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 75.4 bits (177), Expect = 1e-12
Identities = 34/81 (41%), Positives = 52/81 (64%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F+E L + I E G+E+P+P+Q ++ GKDV+ R+K GTGKT A+ IP+LE+
Sbjct: 22 FDELGLSEPVRRAIAEHGYERPTPVQVSTFRPVRDGKDVIVRSKTGTGKTAAFAIPILER 81
Query: 585 VDPKKDTIQALIVVPTRELAL 647
+ + AL++ PTRELA+
Sbjct: 82 IADGRRRPSALVMCPTRELAI 102
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 75.4 bits (177), Expect = 1e-12
Identities = 37/84 (44%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Frame = +3
Query: 399 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGK-DVLARAKNGTGKTGAYCIPV 575
N+FE+ L LL I + G+E P+ +QE +IP+ L D++A A+ GTGKT A+ PV
Sbjct: 2 NKFEQLGLTESLLRAIIDLGFENPTEVQEKAIPMLLEKDIDLVALAQTGTGKTAAFGFPV 61
Query: 576 LEQVDPKKDTIQALIVVPTRELAL 647
++++D QALI+ PTREL L
Sbjct: 62 IQKIDANNRNTQALILSPTRELCL 85
>UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 377
Score = 75.4 bits (177), Expect = 1e-12
Identities = 34/80 (42%), Positives = 53/80 (66%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F++ +K +LL GI+ +EKPS +Q+ ++ + G DV+A+A++GTGKT + + V +
Sbjct: 278 FDQMGIKNDLLRGIYAYSFEKPSAVQQRAVLPIIQGHDVIAQAQSGTGKTSMFALTVYQM 337
Query: 585 VDPKKDTIQALIVVPTRELA 644
VD +QALI PTRELA
Sbjct: 338 VDTSNREVQALISSPTRELA 357
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 74.9 bits (176), Expect = 1e-12
Identities = 37/86 (43%), Positives = 56/86 (65%), Gaps = 5/86 (5%)
Frame = +3
Query: 402 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 581
+FE F E+L I E G++ +P+Q+ +IP G+DVLA A+ GTGKT A+ +P+L+
Sbjct: 2 KFESFSFAPEILRAIAECGYQNMTPVQQQAIPAIRRGEDVLASAQTGTGKTAAFALPILQ 61
Query: 582 QVDPKKDTIQ-----ALIVVPTRELA 644
++ + T+Q ALI+ PTRELA
Sbjct: 62 KMHERPMTVQHSNARALILTPTRELA 87
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 74.9 bits (176), Expect = 1e-12
Identities = 37/83 (44%), Positives = 55/83 (66%), Gaps = 2/83 (2%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
+ + L E+ + + +PSPIQ A IP+AL G+DVL +A+ GTGKT A+ IP++E+
Sbjct: 6 YADMALSVEMKAALEAARYIQPSPIQAAIIPLALEGRDVLGQARTGTGKTAAFGIPIIER 65
Query: 585 VD--PKKDTIQALIVVPTRELAL 647
++ P QALI+ PTRELA+
Sbjct: 66 LEHGPNSRNPQALILTPTRELAV 88
>UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=4;
Neisseria|Rep: Putative ATP-dependent RNA helicase -
Neisseria meningitidis serogroup C / serotype 2a (strain
ATCC 700532 /FAM18)
Length = 483
Score = 74.9 bits (176), Expect = 1e-12
Identities = 41/106 (38%), Positives = 60/106 (56%), Gaps = 8/106 (7%)
Frame = +3
Query: 351 PKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLAR 530
P I++ T N F L EL+ + +G+E P+PIQ A+IP AL+G D+LA
Sbjct: 13 PVSDDIRSERKTTIMSNPFSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDLLAA 72
Query: 531 AKNGTGKTGAYCIPVLEQV--------DPKKDTIQALIVVPTRELA 644
A+ GTGKT A+ +P LE++ P ++ L++ PTRELA
Sbjct: 73 AQTGTGKTAAFMLPSLERLKRYATASTSPAMHPVRMLVLTPTRELA 118
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 74.9 bits (176), Expect = 1e-12
Identities = 36/86 (41%), Positives = 53/86 (61%)
Frame = +3
Query: 387 DTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYC 566
DT+ + F L L + G+E +PIQ +IP+ L G+DV+ A+ GTGKT A+
Sbjct: 5 DTQPSRFNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEGRDVVGLAQTGTGKTAAFA 64
Query: 567 IPVLEQVDPKKDTIQALIVVPTRELA 644
+P+L +D K + QAL++ PTRELA
Sbjct: 65 LPILANIDVKVRSPQALVLCPTRELA 90
>UniRef50_Q86IZ9 Cluster: Similar to Rattus norvegicus (Rat).
ROK1-like protein; n=2; Dictyostelium discoideum|Rep:
Similar to Rattus norvegicus (Rat). ROK1-like protein -
Dictyostelium discoideum (Slime mold)
Length = 668
Score = 74.9 bits (176), Expect = 1e-12
Identities = 48/136 (35%), Positives = 81/136 (59%), Gaps = 7/136 (5%)
Frame = +3
Query: 258 SNHVGNSISQTKGE-VDKSIDDVGWKSKLKIPPKDRRIKT--SDVTD--TRGNEFEE-FC 419
S+ G + ++ K + V K + K ++ RIK +D+ D T ++ E F
Sbjct: 146 SDDSGKNKNKNKNKKVSKETQEDKHKREIATFRNKHRIKVDGTDIPDPMTEFSQLENRFK 205
Query: 420 LKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV-DPK 596
+++ LL I E G+++PSPIQ IPI L ++V+A A G+GKT ++ IP+L+ + +PK
Sbjct: 206 VRKYLLNNINEIGYKEPSPIQMQVIPILLKEREVVAIAPTGSGKTASFSIPILQALYEPK 265
Query: 597 KDTIQALIVVPTRELA 644
K+ +++I+ PTRELA
Sbjct: 266 KEGFRSVIIAPTRELA 281
>UniRef50_Q7QWI2 Cluster: GLP_538_22840_21176; n=2; Giardia
intestinalis|Rep: GLP_538_22840_21176 - Giardia lamblia
ATCC 50803
Length = 554
Score = 74.9 bits (176), Expect = 1e-12
Identities = 36/74 (48%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Frame = +3
Query: 426 RELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIP-VLEQVDPKKD 602
+EL I + GWE PSP+Q+A+IP +S +D L A G+GK+GAY IP +L P D
Sbjct: 105 KELQKNISKLGWEVPSPVQQAAIPALMSRRDCLCLAPTGSGKSGAYIIPSILSLGQPGSD 164
Query: 603 TIQALIVVPTRELA 644
+ L++VPTRELA
Sbjct: 165 GFRVLVLVPTRELA 178
>UniRef50_A2DHK0 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 522
Score = 74.9 bits (176), Expect = 1e-12
Identities = 37/83 (44%), Positives = 56/83 (67%), Gaps = 2/83 (2%)
Frame = +3
Query: 399 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 578
+E+E+ + + +K W++P+PIQ+ +IP AL GKD+LA+A+ G+GKT AY IP+L
Sbjct: 9 SEWEKLIGPEKRVYDAAKKLWDRPTPIQQTAIPPALQGKDILAKARTGSGKTAAYIIPIL 68
Query: 579 EQV--DPKKDTIQALIVVPTREL 641
+ P +ALI+VPTREL
Sbjct: 69 IGLSRSPLPLNFKALILVPTREL 91
>UniRef50_UPI00015A4B44 Cluster: DEAD (Asp-Glu-Ala-Asp) box
polypeptide 56; n=1; Danio rerio|Rep: DEAD
(Asp-Glu-Ala-Asp) box polypeptide 56 - Danio rerio
Length = 344
Score = 74.5 bits (175), Expect = 2e-12
Identities = 33/67 (49%), Positives = 51/67 (76%), Gaps = 5/67 (7%)
Frame = +3
Query: 456 GWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDT-----IQALI 620
GW +P+ IQE +IP+AL GKD+LARA+ G+GKT AY +P++++V K T ++A++
Sbjct: 9 GWSQPTLIQEKAIPLALEGKDLLARARTGSGKTAAYAVPLIQRVLTSKQTVREQAVRAVV 68
Query: 621 VVPTREL 641
+VPT+EL
Sbjct: 69 LVPTKEL 75
>UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 9 SCAF14729, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 457
Score = 74.5 bits (175), Expect = 2e-12
Identities = 35/83 (42%), Positives = 58/83 (69%), Gaps = 2/83 (2%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALS--GKDVLARAKNGTGKTGAYCIPVL 578
FEE LK ELL G+++ G+ +PS IQE ++P+ ++ ++++A++++GTGKT A+C+ +L
Sbjct: 40 FEELRLKPELLKGVYQMGFNRPSRIQENALPLMMAQPAQNLIAQSQSGTGKTAAFCLAML 99
Query: 579 EQVDPKKDTIQALIVVPTRELAL 647
V+P Q L + PT ELAL
Sbjct: 100 GIVNPADKWPQCLCIAPTYELAL 122
>UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1;
Mesoplasma florum|Rep: ATP-dependent RNA helicase -
Mesoplasma florum (Acholeplasma florum)
Length = 666
Score = 74.5 bits (175), Expect = 2e-12
Identities = 30/81 (37%), Positives = 56/81 (69%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F+E L ++L+ + + + + + IQ +IP+ L GK++ ++ GTGKT ++ +P+LE+
Sbjct: 3 FKELQLSDKVLVALEKANFNEATEIQARAIPLFLEGKNIFGKSSTGTGKTASFVLPILEK 62
Query: 585 VDPKKDTIQALIVVPTRELAL 647
++P K +QA+I+ PTRELA+
Sbjct: 63 IEPNKRRVQAVIMAPTRELAM 83
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 74.5 bits (175), Expect = 2e-12
Identities = 40/106 (37%), Positives = 62/106 (58%), Gaps = 6/106 (5%)
Frame = +3
Query: 345 IPPKDRRIKTSDVTDTRGNE--FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKD 518
+ KD S++ + N FE+ L E + I E G+ P+PIQ +IP L GKD
Sbjct: 4 VSAKDHSPIISNLKNDNNNTLTFEQLELCAETVRSIKESGYLSPTPIQALTIPEVLQGKD 63
Query: 519 VLARAKNGTGKTGAYCIPVLE----QVDPKKDTIQALIVVPTRELA 644
++A A+ GTGKT A+ +P++E + PK+ + +L++ PTRELA
Sbjct: 64 IMASAQTGTGKTAAFILPIIELLRAEDKPKRYQVHSLVLTPTRELA 109
>UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 834
Score = 74.5 bits (175), Expect = 2e-12
Identities = 55/153 (35%), Positives = 83/153 (54%), Gaps = 20/153 (13%)
Frame = +3
Query: 243 NRISSSNHVGNSI--SQTKGEVDKSIDDVGWKSK-LK-IPPKDRRIKTSDVT-DTRGN-- 401
N +++N++ N+ S G+ + D W K LK + +D I D T+G
Sbjct: 349 NNNNNNNNINNNNNGSMIGGKQISELPDTHWSKKPLKSMTKRDWHIFKEDFNISTKGGIA 408
Query: 402 -----EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYC 566
++E L RE+L I + G+EKPSPIQ SIPI+L+G+D+L A+ G+GKT A+
Sbjct: 409 PNPIRTWQESNLPREILEAIRQLGYEKPSPIQMQSIPISLTGRDILGIAETGSGKTCAFV 468
Query: 567 IPVLEQV--------DPKKDTIQALIVVPTREL 641
IP+L + D + D AL++ PTREL
Sbjct: 469 IPMLIYISKQPRLTKDTEADGPYALVMAPTREL 501
>UniRef50_Q7S6F3 Cluster: ATP-dependent RNA helicase dbp-9; n=14;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase
dbp-9 - Neurospora crassa
Length = 676
Score = 74.5 bits (175), Expect = 2e-12
Identities = 38/85 (44%), Positives = 56/85 (65%), Gaps = 5/85 (5%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F + L L+ + ++ +EKP+ +Q +IP+AL+G+DVL +AK G+GKT AY +PVL
Sbjct: 97 FSDLGLDPRLVQAVAKQSFEKPTLVQRKAIPLALAGQDVLCKAKTGSGKTAAYVLPVLSG 156
Query: 585 VDPKKDT-----IQALIVVPTRELA 644
+ +K T ALI+VPTRELA
Sbjct: 157 ILKRKATDPTPFTSALILVPTRELA 181
>UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=1;
Reinekea sp. MED297|Rep: Probable ATP-dependent RNA
helicase - Reinekea sp. MED297
Length = 448
Score = 74.1 bits (174), Expect = 3e-12
Identities = 39/83 (46%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F F L +L I + GW +P+ +Q ASIP AL GKD+L A+ G+GKT AY +P L +
Sbjct: 2 FASFDLHPKLTAAIEQHGWTEPTDVQTASIPQALDGKDLLISAETGSGKTAAYLLPALHR 61
Query: 585 V---DPKKDTIQALIVVPTRELA 644
V K I+ L++VPTRELA
Sbjct: 62 VLSERKPKAGIRVLVMVPTRELA 84
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 74.1 bits (174), Expect = 3e-12
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALS-GKDVLARAKNGTGKTGAYCIPVLE 581
F++ L LL I + G+E PS IQE +IP L+ +D++A A+ GTGKT A+ P+L+
Sbjct: 3 FDQLGLNAPLLQAIADMGFETPSKIQEEAIPQLLAEDRDMVALAQTGTGKTAAFGFPLLQ 62
Query: 582 QVDPKKDTIQALIVVPTRELAL 647
+D T Q LI+ PTREL L
Sbjct: 63 NIDASSKTTQGLIIAPTRELCL 84
>UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 727
Score = 74.1 bits (174), Expect = 3e-12
Identities = 47/119 (39%), Positives = 67/119 (56%), Gaps = 11/119 (9%)
Frame = +3
Query: 324 GWKSKLKIPPKDRRIKTSDVTDTRG-------NEFEEFCLKRELLMGIFEKGWEKPSPIQ 482
G K + K KD + + +T+ + F +F L ++ L G+ + + KP+ IQ
Sbjct: 30 GGKPRFKFSMKDEESEIARLTELYATAKIEETSSFSDFPLSKKTLGGLKQGQYHKPTAIQ 89
Query: 483 EASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVD----PKKDTIQALIVVPTRELAL 647
SI AL GKD+LA AK G+GKT A+ IPV E++ K D + ALI+ PTRELAL
Sbjct: 90 RESILPALQGKDILAAAKTGSGKTLAFLIPVFEKLYTNQWTKLDGLGALIITPTRELAL 148
>UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Rep:
DEAD-box helicase 2 - Plasmodium falciparum
Length = 562
Score = 74.1 bits (174), Expect = 3e-12
Identities = 39/137 (28%), Positives = 76/137 (55%)
Frame = +3
Query: 237 TENRISSSNHVGNSISQTKGEVDKSIDDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEF 416
++ I ++NH ++I+ G +K+ D+ + + + + T++ + + FE+
Sbjct: 104 SDYNIINNNH--DNINFIHGNKNKNHDNSFHNNDDVKNGEVKNLVTNEEREKQNVTFEDL 161
Query: 417 CLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPK 596
+ E+L I E GW+KP+ IQ +P A KD++ ++ G+GKT + IP+L+ +
Sbjct: 162 NICEEILESIKELGWKKPTEIQREILPHAFLKKDIIGLSETGSGKTACFIIPILQDLKVN 221
Query: 597 KDTIQALIVVPTRELAL 647
K + AL++ PTREL +
Sbjct: 222 KQSFYALVISPTRELCI 238
>UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein;
n=3; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 478
Score = 74.1 bits (174), Expect = 3e-12
Identities = 38/87 (43%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Frame = +3
Query: 390 TRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIAL--SGKDVLARAKNGTGKTGAY 563
TR ++F++ L LL G++ G+ PS IQ +I S + V+A+A++GTGKTGA+
Sbjct: 88 TRVDDFDQMDLPPALLQGVYSYGFRAPSEIQAIAIGAIRDPSNRHVIAQAQSGTGKTGAF 147
Query: 564 CIPVLEQVDPKKDTIQALIVVPTRELA 644
I VL ++D + T QAL++ PTRELA
Sbjct: 148 SIGVLSKIDVSQKTTQALVLAPTRELA 174
>UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqfR;
n=12; Bacillaceae|Rep: Probable ATP-dependent RNA
helicase yqfR - Bacillus subtilis
Length = 438
Score = 74.1 bits (174), Expect = 3e-12
Identities = 33/81 (40%), Positives = 53/81 (65%)
Frame = +3
Query: 402 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 581
+FE + LK ++ + G+ +P+ IQ+ IP L + V+ +++ GTGKT AY +P+L
Sbjct: 5 KFELYELKPFIIDAVHRLGFYEPTDIQKRLIPAVLKKESVIGQSQTGTGKTHAYLLPLLN 64
Query: 582 QVDPKKDTIQALIVVPTRELA 644
++DP KD +Q +I PTRELA
Sbjct: 65 KIDPAKDVVQVVITAPTRELA 85
>UniRef50_UPI000051A2EE Cluster: PREDICTED: similar to Helicase
CG1666-PA isoform 1; n=1; Apis mellifera|Rep: PREDICTED:
similar to Helicase CG1666-PA isoform 1 - Apis mellifera
Length = 547
Score = 73.7 bits (173), Expect = 3e-12
Identities = 34/97 (35%), Positives = 60/97 (61%), Gaps = 5/97 (5%)
Frame = +3
Query: 366 IKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGT 545
++ + +T+ F E L +L + + GW +P+ IQE +IP+ + GKD+L RA+ G+
Sbjct: 1 MEADEDNETKAKSFYELELDDRILKAVAKLGWLEPTLIQEKTIPLMIEGKDILIRARTGS 60
Query: 546 GKTGAYCIPVLEQVDPKKDT-----IQALIVVPTREL 641
GKT A+ IP+++++ K T I+ LI+ P++EL
Sbjct: 61 GKTAAFTIPLIQKILSNKQTRKQQEIKGLIIAPSKEL 97
>UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_03001730;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001730 - Ferroplasma acidarmanus fer1
Length = 430
Score = 73.7 bits (173), Expect = 3e-12
Identities = 33/62 (53%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Frame = +3
Query: 465 KPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDP-KKDTIQALIVVPTREL 641
+P+ IQE +IP+ L+GKDV+ R+K G+GKT AY +PVL V+ K +++A+I++PTREL
Sbjct: 18 EPTEIQEKAIPVVLTGKDVIIRSKTGSGKTAAYLLPVLNSVEKLKGKSVKAIIILPTREL 77
Query: 642 AL 647
AL
Sbjct: 78 AL 79
>UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|Rep:
MGC114699 protein - Xenopus laevis (African clawed frog)
Length = 758
Score = 73.7 bits (173), Expect = 3e-12
Identities = 37/84 (44%), Positives = 56/84 (66%), Gaps = 3/84 (3%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F++ L R LL I + +P+PIQ+A IP+ L GKD+ A A GTGKT A+ +PVLE+
Sbjct: 183 FQDMNLSRPLLKAISAMSFTQPTPIQKACIPVGLLGKDICACAATGTGKTAAFMLPVLER 242
Query: 585 V--DPKKDTI-QALIVVPTRELAL 647
+ P++ + + L++VPTREL +
Sbjct: 243 LIYKPREAPVTRVLVLVPTRELGI 266
>UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5;
Tetrapoda|Rep: DEAD-box corepressor DP103 beta - Mus
musculus (Mouse)
Length = 505
Score = 73.7 bits (173), Expect = 3e-12
Identities = 36/95 (37%), Positives = 57/95 (60%)
Frame = +3
Query: 363 RIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNG 542
R +T DV +FE L R +L G+ G+E+PSP+Q +IP+ G D++ +AK+G
Sbjct: 51 RTRTGDVVLAEPADFESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSG 110
Query: 543 TGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELAL 647
TGKT + L+ + + + Q LI+ PTRE+A+
Sbjct: 111 TGKTCVFSTIALDSLILENYSTQILILAPTREIAV 145
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 73.7 bits (173), Expect = 3e-12
Identities = 34/81 (41%), Positives = 53/81 (65%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F + L ++ + + G+E PSPIQ A+IP L+G+DVL +A+ GTGKT A+ +P+L +
Sbjct: 17 FADLGLSDAVMQAVTKIGYETPSPIQAATIPALLAGRDVLGQAQTGTGKTAAFALPLLTR 76
Query: 585 VDPKKDTIQALIVVPTRELAL 647
+ Q L++ PTRELA+
Sbjct: 77 TVLNQVKPQVLVLAPTRELAI 97
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 73.7 bits (173), Expect = 3e-12
Identities = 35/81 (43%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F+ F ++ GI + G+ P+PIQE IP AL G+DV+ A+ GTGKT A+ +P+L++
Sbjct: 3 FDSFRFHPQITAGIRDLGYHTPTPIQEQVIPHALDGRDVIGIAQTGTGKTAAFVLPILQR 62
Query: 585 -VDPKKDTIQALIVVPTRELA 644
+ + ++A+IV PTRELA
Sbjct: 63 LMRGPRGRVRAMIVTPTRELA 83
>UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 389
Score = 73.7 bits (173), Expect = 3e-12
Identities = 35/81 (43%), Positives = 53/81 (65%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
+E LK EL+ I + GWEKPSPIQ+ +I I GK+++ +++NG+GKT + I L +
Sbjct: 22 WESMKLKPELIEAIKKNGWEKPSPIQQRAIYIISQGKNIMFQSQNGSGKTATFSIGTLAR 81
Query: 585 VDPKKDTIQALIVVPTRELAL 647
+ T + +IV PTRELA+
Sbjct: 82 LRLTSKTTELIIVSPTRELAI 102
>UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4;
Saccharomycetaceae|Rep: ATP-dependent rRNA helicase RRP3
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 504
Score = 73.7 bits (173), Expect = 3e-12
Identities = 37/80 (46%), Positives = 51/80 (63%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F EF L ELL I + +P+PIQ A+IP AL GKD++ A+ G+GKT A+ IP+L+
Sbjct: 100 FTEFDLVPELLESIQSLKYTQPTPIQAAAIPHALQGKDIVGIAETGSGKTAAFAIPILQT 159
Query: 585 VDPKKDTIQALIVVPTRELA 644
+ AL++ PTRELA
Sbjct: 160 LYTAAQPYYALVLAPTRELA 179
>UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 28 - Arabidopsis thaliana (Mouse-ear cress)
Length = 789
Score = 73.7 bits (173), Expect = 3e-12
Identities = 41/95 (43%), Positives = 58/95 (61%), Gaps = 3/95 (3%)
Frame = +3
Query: 372 TSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGK 551
T D + F E L R LL G++KP+PIQ A IP+AL+G+D+ A A G+GK
Sbjct: 158 TVDGVSFHADTFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGK 217
Query: 552 TGAYCIPVLEQV--DPKK-DTIQALIVVPTRELAL 647
T A+ +P LE++ PK+ + LI+ PTRELA+
Sbjct: 218 TAAFALPTLERLLFRPKRVFATRVLILTPTRELAV 252
>UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;
Eukaryota|Rep: ATP-dependent RNA helicase DDX54 - Homo
sapiens (Human)
Length = 881
Score = 73.7 bits (173), Expect = 3e-12
Identities = 36/102 (35%), Positives = 59/102 (57%), Gaps = 2/102 (1%)
Frame = +3
Query: 348 PPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLA 527
P ++ + + F+ L + GI +KG++ P+PIQ +IP+ L GKDV+A
Sbjct: 79 PDTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVA 138
Query: 528 RAKNGTGKTGAYCIPVLEQV--DPKKDTIQALIVVPTRELAL 647
A+ G+GKT + +P+ E++ + +ALI+ PTRELAL
Sbjct: 139 MARTGSGKTACFLLPMFERLKTHSAQTGARALILSPTRELAL 180
>UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG5800-PA - Tribolium castaneum
Length = 770
Score = 73.3 bits (172), Expect = 5e-12
Identities = 37/86 (43%), Positives = 57/86 (66%), Gaps = 4/86 (4%)
Frame = +3
Query: 399 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 578
N F++ L + L G+ E G+ KP+ IQ +I + L+GKD+L A+ G+GKT A+ IP+L
Sbjct: 51 NSFDDLPLSPKTLKGLKECGYTKPTDIQRETIKLGLTGKDILGAAQTGSGKTLAFLIPIL 110
Query: 579 EQVDPKK----DTIQALIVVPTRELA 644
E++ K+ D + AL++ PTRELA
Sbjct: 111 ERLYCKQWTRLDGLGALVITPTRELA 136
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 73.3 bits (172), Expect = 5e-12
Identities = 35/84 (41%), Positives = 56/84 (66%), Gaps = 3/84 (3%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F E L+ ELL + G+E+P+PIQ ++P ++G+D+L +A GTGKT A+ +P+L +
Sbjct: 59 FAELALRPELLRSLAALGYEEPTPIQREAVPPLVAGRDLLGQAATGTGKTAAFALPLLHR 118
Query: 585 VDPKK---DTIQALIVVPTRELAL 647
+ + QAL++VPTRELA+
Sbjct: 119 LTDDRTGDHGPQALVLVPTRELAV 142
>UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 871
Score = 73.3 bits (172), Expect = 5e-12
Identities = 35/82 (42%), Positives = 57/82 (69%), Gaps = 1/82 (1%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
+++ L + I +KG+ +P+PIQ +IP + GKDV+A ++ G+GKT A+ IP+L++
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQK 85
Query: 585 VDPKKDT-IQALIVVPTRELAL 647
+ + T I+AL+V PTRELAL
Sbjct: 86 LKRRDTTGIRALMVSPTRELAL 107
>UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=2;
Culicidae|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 1061
Score = 73.3 bits (172), Expect = 5e-12
Identities = 38/97 (39%), Positives = 57/97 (58%)
Frame = +3
Query: 357 DRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 536
D R +T+DV +F + L +L G+ + PSPIQ +IP+A G D+L +AK
Sbjct: 8 DERPRTADVEFDLSLQFSKMFLSEPVLRGLTRNNFTHPSPIQARAIPLAKLGLDLLVQAK 67
Query: 537 NGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELAL 647
+GTGKT + + + E +P Q+L VVPTRE+A+
Sbjct: 68 SGTGKTLVFTVLITENHNPDVMFPQSLTVVPTREIAV 104
>UniRef50_Q66HG7 Cluster: Probable ATP-dependent RNA helicase DDX59;
n=4; Tetrapoda|Rep: Probable ATP-dependent RNA helicase
DDX59 - Rattus norvegicus (Rat)
Length = 589
Score = 73.3 bits (172), Expect = 5e-12
Identities = 35/82 (42%), Positives = 51/82 (62%)
Frame = +3
Query: 402 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 581
+FE L + + G+E P+PIQ IP+ L G+D+LA A G+GKT A+ +PV+
Sbjct: 204 DFEHCGFPETLNQNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVII 263
Query: 582 QVDPKKDTIQALIVVPTRELAL 647
+ P+ T ALI+ PTRELA+
Sbjct: 264 RALPEDKTPSALILTPTRELAI 285
>UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP5 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 546
Score = 73.3 bits (172), Expect = 5e-12
Identities = 34/82 (41%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSG--KDVLARAKNGTGKTGAYCIPVL 578
F+E L +L+ GI G++KPS IQE ++P+ LS ++++ ++++GTGKT A+ + +L
Sbjct: 150 FKELNLHEDLMKGIIAAGFQKPSKIQEKALPLLLSNPPRNLIGQSQSGTGKTAAFTLNML 209
Query: 579 EQVDPKKDTIQALIVVPTRELA 644
+VDP T QA+ + P+RELA
Sbjct: 210 SRVDPTIPTPQAICIAPSRELA 231
>UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-dependent
RNA helicase; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ATP-dependent RNA helicase -
Ornithorhynchus anatinus
Length = 580
Score = 72.9 bits (171), Expect = 6e-12
Identities = 35/102 (34%), Positives = 59/102 (57%), Gaps = 2/102 (1%)
Frame = +3
Query: 348 PPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLA 527
P ++ + + F+ L + G+ +KG++ P+PIQ +IP+ L GKDV+A
Sbjct: 133 PDTRELVRVQNKKKKKSGGFQSMGLSYPVFKGVMKKGYKVPTPIQRKTIPVILDGKDVVA 192
Query: 528 RAKNGTGKTGAYCIPVLEQV--DPKKDTIQALIVVPTRELAL 647
A+ G+GKT + IP+ E++ + +AL++ PTRELAL
Sbjct: 193 MARTGSGKTACFLIPMFEKLKAHSAQAGARALVLSPTRELAL 234
>UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducible
ATP-independent RNA helicase; n=2;
Enterobacteriaceae|Rep: Cold-shock DEAD-box protein A,
inducible ATP-independent RNA helicase - Blochmannia
floridanus
Length = 487
Score = 72.9 bits (171), Expect = 6e-12
Identities = 34/83 (40%), Positives = 52/83 (62%)
Frame = +3
Query: 399 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 578
N F + L ++ + G++ P PIQ IP+ L G D+L A G+GKT A+ +P+L
Sbjct: 6 NSFVDLGLNTYIVDMLSNIGYQAPLPIQTQCIPLLLKGCDLLGMAHTGSGKTAAFLLPLL 65
Query: 579 EQVDPKKDTIQALIVVPTRELAL 647
+ +D K+ +Q LI+VPTRELA+
Sbjct: 66 QNIDIKQRFVQGLIIVPTRELAI 88
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 72.9 bits (171), Expect = 6e-12
Identities = 36/87 (41%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Frame = +3
Query: 390 TRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSG-KDVLARAKNGTGKTGAYC 566
T + FE F L ++ + + G+ P+PIQ ++PI L+G D + A GTGKT A+
Sbjct: 41 TTVDNFESFGLSAPVMAAMADMGFTTPTPIQRQALPILLAGANDFIGLASTGTGKTAAFG 100
Query: 567 IPVLEQVDPKKDTIQALIVVPTRELAL 647
IP++E +D QAL++ PTRELAL
Sbjct: 101 IPLIENIDSTVKDTQALVLSPTRELAL 127
>UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box
RNA-helicase; n=4; Gammaproteobacteria|Rep: Possible
ATP-dependent DEAD/DEAH box RNA-helicase - Psychrobacter
arcticum
Length = 567
Score = 72.9 bits (171), Expect = 6e-12
Identities = 37/94 (39%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Frame = +3
Query: 372 TSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGK 551
T+D TD F + + + +L + G+ P+PIQ +IP AL G+D+L A+ G+GK
Sbjct: 35 TTDATDENKVTFTDLNIAKPILSALERSGYTHPTPIQAEAIPFALQGRDLLLSAQTGSGK 94
Query: 552 TGAYCIPVLEQVDPKKD---TIQALIVVPTRELA 644
T A+ IPVL+++ +ALI+ PTRELA
Sbjct: 95 TAAFVIPVLDRLSRATSFDKLTKALILTPTRELA 128
>UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL
protein - Bacillus subtilis
Length = 376
Score = 72.9 bits (171), Expect = 6e-12
Identities = 30/64 (46%), Positives = 48/64 (75%)
Frame = +3
Query: 456 GWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTR 635
G++KP+P+QE + + + GKDV+A + GTGKT AY +PVLE++ P++ QA+I+ P+R
Sbjct: 23 GFQKPTPVQEQAAQLIMDGKDVIAESPTGTGKTLAYALPVLERIKPEQKHPQAVILAPSR 82
Query: 636 ELAL 647
EL +
Sbjct: 83 ELVM 86
>UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DEAD/DEAH box
helicase-like protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 568
Score = 72.9 bits (171), Expect = 6e-12
Identities = 35/80 (43%), Positives = 51/80 (63%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F E L +L + G+E PS IQ +IP L G+DVL +A+ GTGKT A+ +P+L +
Sbjct: 11 FAELSLPSTILSTLETLGYETPSLIQAKTIPALLEGRDVLGQAQTGTGKTAAFALPLLSR 70
Query: 585 VDPKKDTIQALIVVPTRELA 644
+D ++ Q L++ PTRELA
Sbjct: 71 LDLQRREPQVLVLAPTRELA 90
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 72.9 bits (171), Expect = 6e-12
Identities = 33/83 (39%), Positives = 54/83 (65%)
Frame = +3
Query: 399 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 578
+ F ++ L ELL I +E P+ +Q+ IP L KD++ +++ G+GKT A+ IP+
Sbjct: 4 SNFSDYQLSDELLKSISMLNFESPTKVQQQVIPAILEHKDIIVKSQTGSGKTAAFAIPIC 63
Query: 579 EQVDPKKDTIQALIVVPTRELAL 647
+ VD ++ QAL++VPTRELA+
Sbjct: 64 QLVDWDENKPQALVLVPTRELAI 86
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 72.9 bits (171), Expect = 6e-12
Identities = 36/81 (44%), Positives = 51/81 (62%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F + L LL + G+E P+PIQ +I L G DVL A+ GTGKT A+ +P+L +
Sbjct: 7 FADLGLAPVLLKTLDSLGYETPTPIQSQAIVQLLDGNDVLGLAQTGTGKTAAFSLPLLSR 66
Query: 585 VDPKKDTIQALIVVPTRELAL 647
+D K+ QAL++ PTRELA+
Sbjct: 67 IDTTKNKPQALVLCPTRELAI 87
>UniRef50_Q59H21 Cluster: ATP-dependent RNA helicase ROK1 isoform a
variant; n=3; Tetrapoda|Rep: ATP-dependent RNA helicase
ROK1 isoform a variant - Homo sapiens (Human)
Length = 512
Score = 72.9 bits (171), Expect = 6e-12
Identities = 35/80 (43%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Frame = +3
Query: 408 EEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV 587
+E+ + LL I + G++ P+PIQ +IP+ L G+++LA A G+GKT A+ IP+L Q+
Sbjct: 167 QEYKINSRLLQNILDAGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQL 226
Query: 588 -DPKKDTIQALIVVPTRELA 644
P +ALI+ PTRELA
Sbjct: 227 KQPANKGFRALIISPTRELA 246
>UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX52;
n=37; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX52 - Homo sapiens (Human)
Length = 599
Score = 72.9 bits (171), Expect = 6e-12
Identities = 35/80 (43%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Frame = +3
Query: 408 EEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV 587
+E+ + LL I + G++ P+PIQ +IP+ L G+++LA A G+GKT A+ IP+L Q+
Sbjct: 168 QEYKINSRLLQNILDAGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQL 227
Query: 588 -DPKKDTIQALIVVPTRELA 644
P +ALI+ PTRELA
Sbjct: 228 KQPANKGFRALIISPTRELA 247
>UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=24; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX20 - Homo sapiens (Human)
Length = 824
Score = 72.9 bits (171), Expect = 6e-12
Identities = 36/95 (37%), Positives = 57/95 (60%)
Frame = +3
Query: 363 RIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNG 542
R +T DV +FE L R +L G+ G+E+PSP+Q +IP+ G D++ +AK+G
Sbjct: 50 RTRTGDVLLAEPADFESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSG 109
Query: 543 TGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELAL 647
TGKT + L+ + + + Q LI+ PTRE+A+
Sbjct: 110 TGKTCVFSTIALDSLVLENLSTQILILAPTREIAV 144
>UniRef50_A5DC85 Cluster: ATP-dependent RNA helicase DBP9; n=4;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP9 -
Pichia guilliermondii (Yeast) (Candida guilliermondii)
Length = 586
Score = 72.9 bits (171), Expect = 6e-12
Identities = 35/85 (41%), Positives = 59/85 (69%), Gaps = 4/85 (4%)
Frame = +3
Query: 402 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGK-DVLARAKNGTGKTGAYCIPVL 578
++E F L LL +++ G+EKP+ IQ +IP++L K D++A+A G+GKTGAY IP++
Sbjct: 36 KWENFKLDPRLLQAVYQLGFEKPTLIQSNAIPLSLEDKRDIIAKASTGSGKTGAYSIPII 95
Query: 579 EQV---DPKKDTIQALIVVPTRELA 644
+ + + I+++I+VPT+ELA
Sbjct: 96 QNILSEGLSEHNIKSVILVPTKELA 120
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 72.5 bits (170), Expect = 8e-12
Identities = 37/82 (45%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F + ++++L+ + P+P+QE SIP L GKD+LA A+ GTGKT A+ +P+++
Sbjct: 9 FADLGIEQQLVETLNNMNIVTPTPVQEKSIPHVLEGKDLLAAAQTGTGKTAAFGLPIIQA 68
Query: 585 VDPKK--DTIQALIVVPTRELA 644
V KK T ALI+VPTRELA
Sbjct: 69 VQQKKRNGTPHALILVPTRELA 90
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 72.5 bits (170), Expect = 8e-12
Identities = 37/81 (45%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGK-DVLARAKNGTGKTGAYCIPVLE 581
FE L + LL G+ + G+E P+ IQ+ SIPI L D + A+ GTGKT A+ +P+L+
Sbjct: 15 FEVLGLSQPLLNGLADMGFENPTEIQQQSIPILLKHDGDFIGLAQTGTGKTAAFGLPLLD 74
Query: 582 QVDPKKDTIQALIVVPTRELA 644
+D +QALI+ PTRELA
Sbjct: 75 LIDVNSREVQALILAPTRELA 95
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 72.5 bits (170), Expect = 8e-12
Identities = 32/66 (48%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Frame = +3
Query: 453 KGWEKPSPIQEASIPIALS-GKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVP 629
KG+++PSPIQE +IP+ LS D++ +A+ GTGKT A+ +P++++++P QALI+ P
Sbjct: 20 KGFKEPSPIQEQAIPVLLSQDHDIIGQAQTGTGKTAAFGLPIVQKIEPGLKKPQALILCP 79
Query: 630 TRELAL 647
TRELA+
Sbjct: 80 TRELAI 85
>UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Clostridiales|Rep: DEAD/DEAH box helicase domain
protein - Desulfotomaculum reducens MI-1
Length = 438
Score = 72.5 bits (170), Expect = 8e-12
Identities = 29/81 (35%), Positives = 55/81 (67%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F++ + ++ G+ ++G + P+ IQ+ +IP+AL KD++ +++ G+GKT AY +P+ ++
Sbjct: 5 FDKLEIDADIAEGLSKQGIKNPTAIQKVAIPLALKNKDIIGQSQTGSGKTLAYLLPIFQK 64
Query: 585 VDPKKDTIQALIVVPTRELAL 647
+D K QALI+ PT EL +
Sbjct: 65 IDSSKRETQALILAPTHELVM 85
>UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like -
Pseudomonas putida W619
Length = 621
Score = 72.5 bits (170), Expect = 8e-12
Identities = 37/83 (44%), Positives = 57/83 (68%), Gaps = 3/83 (3%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F +F L LL + E + +P+P+Q A+IP+AL G+D+ A+ G+GKT A+ +P+L +
Sbjct: 184 FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPLLNR 243
Query: 585 -VDPK--KDTIQALIVVPTRELA 644
VD K + I+ALI++PTRELA
Sbjct: 244 LVDLKGARVEIRALILLPTRELA 266
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 72.5 bits (170), Expect = 8e-12
Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F L + + E+G++ PSPIQ +IP L+GKDV+A A+ GTGKT + +P+LE
Sbjct: 3 FSSLGLSAPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLEL 62
Query: 585 VD----PKKDTIQALIVVPTRELA 644
+ K I+AL++ PTRELA
Sbjct: 63 LSKGNKAKAGQIRALVLTPTRELA 86
>UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia
intestinalis|Rep: GLP_15_13424_14974 - Giardia lamblia
ATCC 50803
Length = 516
Score = 72.5 bits (170), Expect = 8e-12
Identities = 34/83 (40%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F +F L+ E+L I G+E PS +Q +IP AL KDV+ +AK+G GKT + + +L
Sbjct: 130 FSDFNLREEVLQAIISNGFESPSDVQSMAIPPALEHKDVICQAKSGKGKTAVFVLSLLHM 189
Query: 585 VDPK--KDTIQALIVVPTRELAL 647
+DP+ +QAL++ T ELA+
Sbjct: 190 IDPQAAPHKVQALVLCNTHELAM 212
>UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n=7;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania major
Length = 803
Score = 72.5 bits (170), Expect = 8e-12
Identities = 37/87 (42%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Frame = +3
Query: 393 RGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIP 572
+G F+ F L++ LL I ++G+ P+PIQ +IP L G DV+A A+ G+GKT A+ IP
Sbjct: 20 KGGGFQSFNLEKPLLDAILKQGFSVPTPIQRKAIPPMLQGNDVVAMARTGSGKTAAFLIP 79
Query: 573 VLE--QVDPKKDTIQALIVVPTRELAL 647
+L + K I+ L++ PTREL+L
Sbjct: 80 MLNTLKAHAKIVGIRGLVLSPTRELSL 106
>UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 568
Score = 72.5 bits (170), Expect = 8e-12
Identities = 53/141 (37%), Positives = 73/141 (51%), Gaps = 18/141 (12%)
Frame = +3
Query: 276 SISQTKGEVDKSIDDVGWKSKLKIPPKDR--RIKTSD--VTDTRGN------EFEEFCLK 425
S S +DK DD W K KDR RI D ++ GN + E +
Sbjct: 216 SYSSRYDSLDKRFDDKHWSEKSLSQMKDRDWRIFREDFGISARGGNIPKPLRSWRESGIP 275
Query: 426 RELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVD--PKK 599
+L I E G+++PSPIQ +IPI L +D++ A+ G+GKT ++ IP+L + PK
Sbjct: 276 ASILSTIEEVGYKEPSPIQRQAIPIGLQNRDLIGIAETGSGKTASFLIPLLAYISKLPKL 335
Query: 600 DT------IQALIVVPTRELA 644
D QALI+VPTRELA
Sbjct: 336 DEHTKALGPQALILVPTRELA 356
>UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1;
Methanospirillum hungatei JF-1|Rep: DEAD/DEAH box
helicase-like - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 531
Score = 72.5 bits (170), Expect = 8e-12
Identities = 32/81 (39%), Positives = 51/81 (62%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F + L ++ I + G+E+P+PIQ+ IP+ L+G DV +A GTGKT A+ IP +E
Sbjct: 6 FSDLQLSPGIIKAIRDIGYEEPTPIQQEVIPLILAGNDVAGQAYTGTGKTAAFGIPAIEL 65
Query: 585 VDPKKDTIQALIVVPTRELAL 647
P +Q +++ P+RELA+
Sbjct: 66 CQPANRNVQTIVLCPSRELAV 86
>UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;
n=4; core eudicotyledons|Rep: DEAD-box ATP-dependent RNA
helicase 38 - Arabidopsis thaliana (Mouse-ear cress)
Length = 496
Score = 72.5 bits (170), Expect = 8e-12
Identities = 42/104 (40%), Positives = 63/104 (60%), Gaps = 6/104 (5%)
Frame = +3
Query: 351 PKDRRIK---TSDVTDTRGNEFEEFCLKRELLMGIF-EKGWEKPSPIQEASIPIALSG-- 512
P+D IK + D T + FE+ L EL+ G++ E +EKPS IQ S+P+ ++
Sbjct: 72 PEDSNIKAVTSGDTPYTSASRFEDLNLSPELMKGLYVEMKFEKPSKIQAISLPMIMTPPH 131
Query: 513 KDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELA 644
K ++A+A NG+GKT + + +L +VDP QAL + PTRELA
Sbjct: 132 KHLIAQAHNGSGKTTCFVLGMLSRVDPTLREPQALCICPTRELA 175
>UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3); n=1; Apis mellifera|Rep: PREDICTED: similar
to Probable ATP-dependent RNA helicase DDX20 (DEAD box
protein 20) (DEAD box protein DP 103) (Component of gems
3) (Gemin-3) - Apis mellifera
Length = 648
Score = 72.1 bits (169), Expect = 1e-11
Identities = 33/74 (44%), Positives = 52/74 (70%)
Frame = +3
Query: 426 RELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDT 605
+++L G+ G+++PSPIQ +IP+ G D++ RAK+GTGKT +CI LE +D +
Sbjct: 5 QKILDGLSVCGFQRPSPIQLKAIPLGRCGFDLIMRAKSGTGKTLVFCIISLEMIDIDISS 64
Query: 606 IQALIVVPTRELAL 647
+Q LI+ PTRE+A+
Sbjct: 65 VQVLILAPTREIAV 78
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 72.1 bits (169), Expect = 1e-11
Identities = 34/87 (39%), Positives = 55/87 (63%), Gaps = 4/87 (4%)
Frame = +3
Query: 399 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 578
+ F E L EL + G+E+P+PIQ +IP+ L G D+LA A+ GTGKT ++ +P++
Sbjct: 4 SSFAELALCPELQFTLKNLGYEQPTPIQSQAIPLVLRGDDLLAEAQTGTGKTASFALPII 63
Query: 579 EQVDPKK----DTIQALIVVPTRELAL 647
E++ ++AL++ PTRELA+
Sbjct: 64 EKLSKNPIDGYRPVRALVLAPTRELAI 90
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 72.1 bits (169), Expect = 1e-11
Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F L + + E+G++ PSPIQ +IP L+GKDV+A A+ GTGKT + +P+LE
Sbjct: 3 FSSLGLSLPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLEL 62
Query: 585 VD----PKKDTIQALIVVPTRELA 644
+ K I+AL++ PTRELA
Sbjct: 63 LSKGNKAKAGQIRALVLTPTRELA 86
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 72.1 bits (169), Expect = 1e-11
Identities = 31/81 (38%), Positives = 51/81 (62%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F + L L + E G+ +P+PIQ ++P L+G+DV A+ GTGKT A+ +P+L +
Sbjct: 135 FSKLGLNDALAFAVTEMGYTEPTPIQAQAVPAVLAGRDVTGSAQTGTGKTAAFALPILHK 194
Query: 585 VDPKKDTIQALIVVPTRELAL 647
+ + ++ L++ PTRELAL
Sbjct: 195 LGAHERRLRCLVLEPTRELAL 215
>UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2;
sulfur-oxidizing symbionts|Rep: ATP-dependent RNA
helicase DeaD - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA)
Length = 608
Score = 72.1 bits (169), Expect = 1e-11
Identities = 34/83 (40%), Positives = 54/83 (65%)
Frame = +3
Query: 399 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 578
++FE L +L + G+E PSPIQE I L+ KD++ +A+ GTGKT A+ +P+L
Sbjct: 12 SKFERLGLSNTILNVLDSIGYETPSPIQEQCITHLLNNKDIIGQAQTGTGKTAAFVLPLL 71
Query: 579 EQVDPKKDTIQALIVVPTRELAL 647
++++ + Q LI+ PTRELA+
Sbjct: 72 DKINLNINAPQLLILAPTRELAI 94
>UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase RhlE;
n=1; Campylobacter fetus subsp. fetus 82-40|Rep:
Putative ATP-dependent RNA helicase RhlE - Campylobacter
fetus subsp. fetus (strain 82-40)
Length = 624
Score = 72.1 bits (169), Expect = 1e-11
Identities = 34/85 (40%), Positives = 55/85 (64%), Gaps = 5/85 (5%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F +F L +L + E ++ P+ IQ+ +IP + GKD+LA A+ GTGKT A+ +P+LE+
Sbjct: 3 FSDFDLSSAILEALKELNYDAPTQIQQVAIPAIMQGKDILAGARTGTGKTAAFALPILEK 62
Query: 585 V-----DPKKDTIQALIVVPTRELA 644
+ + K+ + L++VPTRELA
Sbjct: 63 LSSKERNKKRPQTRVLVLVPTRELA 87
>UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 540
Score = 71.7 bits (168), Expect = 1e-11
Identities = 38/83 (45%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Frame = +3
Query: 402 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 581
+FEE + +LL I E G+ + +PIQE SIP L GKD+ A+ GTGKT A+ IPV+
Sbjct: 2 KFEELSIHPKLLSAIQEIGYTELTPIQEKSIPHGLEGKDITGLAQTGTGKTVAFLIPVIH 61
Query: 582 QVDPKK-DTIQALIVVPTRELAL 647
+ K I AL++ PTREL +
Sbjct: 62 NILTKGIQGIAALVLAPTRELTM 84
>UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4;
Wolbachia|Rep: Superfamily II DNA/RNA helicase -
Wolbachia sp. subsp. Brugia malayi (strain TRS)
Length = 408
Score = 71.7 bits (168), Expect = 1e-11
Identities = 34/82 (41%), Positives = 52/82 (63%)
Frame = +3
Query: 399 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 578
N F E L L + + + P+P+Q +IP+AL GKD+L A+ GTGKT A+ IP++
Sbjct: 2 NSFYEMGLPLLLAQALDKNSFSVPTPVQAQAIPLALKGKDILGSAQTGTGKTLAFAIPLI 61
Query: 579 EQVDPKKDTIQALIVVPTRELA 644
++ + + AL++VPTRELA
Sbjct: 62 AKLLGEPNASTALVIVPTRELA 83
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 71.7 bits (168), Expect = 1e-11
Identities = 36/93 (38%), Positives = 51/93 (54%)
Frame = +3
Query: 369 KTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTG 548
KT VT+ F L LL + G+ + IQ +IP L+GKDVL A+ GTG
Sbjct: 5 KTETVTEPEAVAFASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAGKDVLGEAQTGTG 64
Query: 549 KTGAYCIPVLEQVDPKKDTIQALIVVPTRELAL 647
KT A+ +P L ++D Q +++ PTRELA+
Sbjct: 65 KTAAFGLPALAKIDTSIKKPQLMVLAPTRELAM 97
>UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3;
Deltaproteobacteria|Rep: DEAD/DEAH box helicase-like -
Desulfovibrio desulfuricans (strain G20)
Length = 530
Score = 71.7 bits (168), Expect = 1e-11
Identities = 35/83 (42%), Positives = 53/83 (63%), Gaps = 4/83 (4%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE- 581
F F L L+ + +G+ P+PIQE ++P AL+G+D+L A GTGKT A+ +P+L
Sbjct: 58 FARFSLHPALIEAVSARGFVNPTPIQEKALPPALAGQDILGLAATGTGKTAAFVLPLLHR 117
Query: 582 ---QVDPKKDTIQALIVVPTREL 641
Q + + T++AL+V PTREL
Sbjct: 118 LLLQGESARGTLRALVVAPTREL 140
>UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: DEAD/DEAH box
helicase-like protein - Psychroflexus torquis ATCC
700755
Length = 255
Score = 71.7 bits (168), Expect = 1e-11
Identities = 33/80 (41%), Positives = 52/80 (65%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F+ + L L G+ + GWE + +Q ++PIA G DV+ +A+ G+GKT A+ +P+LE+
Sbjct: 7 FDSWELPDALRTGLAQLGWEFATQVQRDTVPIARQGTDVIGQARTGSGKTAAFGLPILER 66
Query: 585 VDPKKDTIQALIVVPTRELA 644
P +QAL++ PTRELA
Sbjct: 67 CQP-SGKLQALVLAPTRELA 85
>UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinobacter aquaeolei VT8|Rep: DEAD/DEAH box
helicase domain protein - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 528
Score = 71.7 bits (168), Expect = 1e-11
Identities = 35/81 (43%), Positives = 49/81 (60%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F E L +L + G+E PSPIQ SIP L+G +L A+ GTGKT A+ +P+L +
Sbjct: 26 FAELGLDPAVLEAVSAVGYETPSPIQAQSIPALLAGNHLLGVAQTGTGKTAAFALPLLSR 85
Query: 585 VDPKKDTIQALIVVPTRELAL 647
+D Q L++ PTRELA+
Sbjct: 86 IDANVAEPQILVLAPTRELAI 106
>UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein;
n=19; Alteromonadales|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 487
Score = 71.7 bits (168), Expect = 1e-11
Identities = 35/85 (41%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Frame = +3
Query: 402 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 581
+F+ L +L I E G+ + + +Q+ IP+AL GKD++A A+ GTGKT ++ +PVLE
Sbjct: 23 KFDTLGLSSPILNAIAECGYLQLTQVQQQVIPLALEGKDIMACAQTGTGKTASFALPVLE 82
Query: 582 QVDPK---KDTIQALIVVPTRELAL 647
Q+ + K ++AL++ PTRELA+
Sbjct: 83 QLSKQPNDKPLLRALVMTPTRELAI 107
>UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DRS1 -
Ustilago maydis (Smut fungus)
Length = 932
Score = 71.7 bits (168), Expect = 1e-11
Identities = 39/98 (39%), Positives = 58/98 (59%), Gaps = 7/98 (7%)
Frame = +3
Query: 375 SDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKT 554
S T+ + F F L R +L + + KP+PIQ +IPIAL+GKD++A A G+GKT
Sbjct: 325 SKSTNDAESSFGAFDLSRPVLRALSSLSFHKPTPIQSRTIPIALAGKDIVAGAVTGSGKT 384
Query: 555 GAYCIPVLEQV-------DPKKDTIQALIVVPTRELAL 647
A+ IP +E++ P + + LI+ PTRELA+
Sbjct: 385 AAFMIPTIERLTWRAKTRTPHEAKSRVLILAPTRELAI 422
>UniRef50_UPI0000DAE40A Cluster: hypothetical protein
Rgryl_01000266; n=1; Rickettsiella grylli|Rep:
hypothetical protein Rgryl_01000266 - Rickettsiella
grylli
Length = 433
Score = 71.3 bits (167), Expect = 2e-11
Identities = 35/81 (43%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F EF ++L GI +G+ +PIQ +IP L G+DV+ A+ GTGKT AY +P+L+Q
Sbjct: 15 FTEFNFNTQILSGIQTQGYRTATPIQIKAIPAILQGRDVVGLAQTGTGKTAAYALPLLQQ 74
Query: 585 V-DPKKDTIQALIVVPTRELA 644
+ + ++ALI+ PTR+LA
Sbjct: 75 LTEGPPGQLRALILSPTRDLA 95
>UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6;
Proteobacteria|Rep: ATP-independent RNA helicase -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 460
Score = 71.3 bits (167), Expect = 2e-11
Identities = 35/80 (43%), Positives = 51/80 (63%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F L E L + E G+ + +P+Q A++P LSG DV A+AK G+GKT A+ I +L++
Sbjct: 6 FSSLALPAEQLSNLNELGYTEMTPVQAATLPAVLSGADVRAKAKTGSGKTAAFGIGLLDR 65
Query: 585 VDPKKDTIQALIVVPTRELA 644
+ T QAL++ PTRELA
Sbjct: 66 IVVSDFTTQALVLCPTRELA 85
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 71.3 bits (167), Expect = 2e-11
Identities = 34/83 (40%), Positives = 55/83 (66%), Gaps = 2/83 (2%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE- 581
F E L +L + + + +P+PIQ +I AL+GKD++A A+ GTGKT A+ +P ++
Sbjct: 4 FSELPLSAQLKSNLAKNNFTEPTPIQSLAIEPALAGKDIVATAQTGTGKTLAFLLPTIQL 63
Query: 582 -QVDPKKDTIQALIVVPTRELAL 647
+P++ ++ALI+ PTRELAL
Sbjct: 64 LSTEPRQPGVRALILTPTRELAL 86
>UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Type III restriction enzyme, res subunit family protein
- Tetrahymena thermophila SB210
Length = 1130
Score = 71.3 bits (167), Expect = 2e-11
Identities = 36/87 (41%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Frame = +3
Query: 393 RGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIP 572
+G FE L + I +G+ P+PIQ +IP+ L G+DV+A ++ G+GKT A+ IP
Sbjct: 297 KGGGFESMNLVYPVYKAIKTRGFNMPTPIQRKAIPLILEGRDVVACSRTGSGKTAAFIIP 356
Query: 573 VLEQVDPKKDTI--QALIVVPTRELAL 647
++ ++ + +ALIVVPTRELAL
Sbjct: 357 LINKLQNHSRIVGARALIVVPTRELAL 383
>UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 643
Score = 71.3 bits (167), Expect = 2e-11
Identities = 43/136 (31%), Positives = 74/136 (54%), Gaps = 2/136 (1%)
Frame = +3
Query: 243 NRISSSNHVGNSISQTKGEVDKSIDDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCL 422
N+ S+ + + + E + DD+G + ++++K + + +++ L
Sbjct: 141 NKASNDKVLKMAKEKLDNESEHEDDDMGTQINQNA---NKKLKEQKLNKKKKKTWQDLGL 197
Query: 423 KRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV--DPK 596
+ LL + E +E P+ IQ +IP AL GKD+LA + G+GKT A+ IP+L++ P
Sbjct: 198 IKPLLKAVEEMQYEFPTNIQSLAIPAALQGKDLLASSLTGSGKTAAFLIPILQKFYRSPF 257
Query: 597 KDTIQALIVVPTRELA 644
+ +ALIV PTRELA
Sbjct: 258 TNYSKALIVTPTRELA 273
>UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 515
Score = 71.3 bits (167), Expect = 2e-11
Identities = 36/83 (43%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
FEE L ++ + + +E P+P+Q +IPIAL G+DV A A G+GKT A+ IP +E+
Sbjct: 18 FEELGLSHSIIRALHKMNFEIPTPVQNKTIPIALQGRDVCASAVTGSGKTAAFLIPTVER 77
Query: 585 VDPKKDT---IQALIVVPTRELA 644
+ K T +A+I+ PTRELA
Sbjct: 78 LLRSKSTEAQTRAVILSPTRELA 100
>UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal; n=1;
Exiguobacterium sibiricum 255-15|Rep: IMP
dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal -
Exiguobacterium sibiricum 255-15
Length = 450
Score = 70.9 bits (166), Expect = 2e-11
Identities = 32/82 (39%), Positives = 54/82 (65%)
Frame = +3
Query: 399 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 578
N F F L ++ + + +KP+ IQ IP AL G+D++ +++ GTGKT ++ +P++
Sbjct: 2 NGFSHFDLHPFVVEALEDARIKKPTDIQSRIIPAALKGRDIIGQSQTGTGKTLSFLLPIV 61
Query: 579 EQVDPKKDTIQALIVVPTRELA 644
+ V+P+ +QA+IV PTRELA
Sbjct: 62 QNVNPELQEMQAIIVAPTRELA 83
>UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 755
Score = 70.9 bits (166), Expect = 2e-11
Identities = 38/85 (44%), Positives = 54/85 (63%), Gaps = 4/85 (4%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F+E L R L G++KP+PIQ A IPIA++G+DV RA G+GKT A+ +P LE+
Sbjct: 150 FDELHLSRPLTRACEALGYKKPTPIQAAVIPIAMTGRDVCGRAVTGSGKTAAFMLPQLER 209
Query: 585 V---DPK-KDTIQALIVVPTRELAL 647
+ P+ L++VPTRELA+
Sbjct: 210 MLHRGPRPAAATHVLVLVPTRELAV 234
>UniRef50_Q9VRI0 Cluster: CG1666-PA; n=22; Eumetazoa|Rep: CG1666-PA
- Drosophila melanogaster (Fruit fly)
Length = 560
Score = 70.9 bits (166), Expect = 2e-11
Identities = 29/85 (34%), Positives = 55/85 (64%), Gaps = 5/85 (5%)
Frame = +3
Query: 402 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 581
+F E L + +L + + GW++P+ IQ +IP+ L GKDV+ RA+ G+GKT Y +P+++
Sbjct: 10 QFHELELDQRILKAVAQLGWQQPTLIQSTAIPLLLEGKDVVVRARTGSGKTATYALPLIQ 69
Query: 582 QV-----DPKKDTIQALIVVPTREL 641
++ + + + A+++ PT+EL
Sbjct: 70 KILNSKLNASEQYVSAVVLAPTKEL 94
>UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 521
Score = 70.9 bits (166), Expect = 2e-11
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
FEE L +E++ I E W P+PIQ SIPI L G D++ AK G+GKT ++ IP L
Sbjct: 87 FEELNLPQEIMEVIKENNWTNPTPIQSLSIPIGLKGNDMVGIAKTGSGKTASFLIPALMH 146
Query: 585 VDPKK-----DTIQALIVVPTRELAL 647
+ ++ D L++ PTRELAL
Sbjct: 147 ISAQRKISENDGPIVLVLSPTRELAL 172
>UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82;
Eukaryota|Rep: ATP-dependent RNA helicase WM6 -
Drosophila melanogaster (Fruit fly)
Length = 424
Score = 70.9 bits (166), Expect = 2e-11
Identities = 34/81 (41%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F +F LK E+L I + G+E PS +Q IP A+ G D+L +AK+G GKT + + L+Q
Sbjct: 43 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 102
Query: 585 VDPK-KDTIQALIVVPTRELA 644
++P +T L++ TRELA
Sbjct: 103 LEPSDNNTCHVLVMCHTRELA 123
>UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82;
Proteobacteria|Rep: ATP-dependent RNA helicase srmB -
Escherichia coli (strain K12)
Length = 444
Score = 70.9 bits (166), Expect = 2e-11
Identities = 39/85 (45%), Positives = 54/85 (63%), Gaps = 4/85 (4%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F E L LL + +KG+ +P+ IQ A+IP AL G+DVL A GTGKT AY +P L+
Sbjct: 6 FSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPALQH 65
Query: 585 V--DPKKDT--IQALIVVPTRELAL 647
+ P+K + + LI+ PTRELA+
Sbjct: 66 LLDFPRKKSGPPRILILTPTRELAM 90
>UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6;
Ascomycota|Rep: ATP-dependent rRNA helicase RRP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 501
Score = 70.9 bits (166), Expect = 2e-11
Identities = 40/119 (33%), Positives = 58/119 (48%), Gaps = 3/119 (2%)
Frame = +3
Query: 297 EVDKSIDDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFC---LKRELLMGIFEKGWEK 467
E D D K K+ + T + FE F L EL+ + K
Sbjct: 44 ESDSEEDATAEKKKVLKSKSKSTVSTQNENTNEDESFESFSELNLVPELIQACKNLNYSK 103
Query: 468 PSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELA 644
P+PIQ +IP AL G D++ A+ G+GKT A+ IP+L ++ ++ A I+ PTRELA
Sbjct: 104 PTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWHDQEPYYACILAPTRELA 162
>UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;
n=4; Oryza sativa|Rep: DEAD-box ATP-dependent RNA
helicase 38 - Oryza sativa subsp. japonica (Rice)
Length = 505
Score = 70.9 bits (166), Expect = 2e-11
Identities = 36/83 (43%), Positives = 55/83 (66%), Gaps = 3/83 (3%)
Frame = +3
Query: 405 FEEFCLKRELLMGIF-EKGWEKPSPIQEASIPIALSG--KDVLARAKNGTGKTGAYCIPV 575
FE+ L ELL G+ E G+ +PS IQ ++P+ L+ KD++A+A NG+GKT + + +
Sbjct: 102 FEDLKLTPELLKGLHDEMGFSRPSKIQAVTLPMILTPPYKDLIAQAHNGSGKTTCFVLGM 161
Query: 576 LEQVDPKKDTIQALIVVPTRELA 644
L +VDP + QA+ + PTRELA
Sbjct: 162 LSRVDPNRKVTQAICICPTRELA 184
>UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX59;
n=34; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX59 - Homo sapiens (Human)
Length = 619
Score = 70.9 bits (166), Expect = 2e-11
Identities = 35/82 (42%), Positives = 51/82 (62%)
Frame = +3
Query: 402 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 581
+FE L L + + G+E P+PIQ IP+ L G+D+LA A G+GKT A+ +PV+
Sbjct: 204 DFEHCSLPEVLNHNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVIM 263
Query: 582 QVDPKKDTIQALIVVPTRELAL 647
+ + T ALI+ PTRELA+
Sbjct: 264 RALFESKTPSALILTPTRELAI 285
>UniRef50_Q4P7M1 Cluster: ATP-dependent RNA helicase DBP9; n=2;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP9 -
Ustilago maydis (Smut fungus)
Length = 686
Score = 70.9 bits (166), Expect = 2e-11
Identities = 38/85 (44%), Positives = 56/85 (65%), Gaps = 10/85 (11%)
Frame = +3
Query: 420 LKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV---- 587
L LL + + G+ P+PIQ+ +IP+AL+GKD+LARA+ G+GKT AY +P+L++V
Sbjct: 66 LDPRLLRALADLGYGIPTPIQQKAIPLALAGKDILARARTGSGKTLAYGLPLLQKVLDAK 125
Query: 588 ------DPKKDTIQALIVVPTRELA 644
D +AL++VPTRELA
Sbjct: 126 SAVAKSDANHQLTRALVLVPTRELA 150
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 70.5 bits (165), Expect = 3e-11
Identities = 36/89 (40%), Positives = 54/89 (60%), Gaps = 8/89 (8%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL-- 578
F + L E+L + ++G+ P+PIQ IP L+GKDV+A A+ GTGKT + +P+L
Sbjct: 7 FAQLGLSSEILHAVNDEGYVNPTPIQAQVIPSILAGKDVMASAQTGTGKTAGFTLPLLYR 66
Query: 579 ------EQVDPKKDTIQALIVVPTRELAL 647
V P + ++ALI+ PTRELA+
Sbjct: 67 LQAYANTSVSPARHPVRALIMAPTRELAM 95
>UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1;
Acidobacteria bacterium Ellin345|Rep: DEAD/DEAH box
helicase-like - Acidobacteria bacterium (strain
Ellin345)
Length = 423
Score = 70.5 bits (165), Expect = 3e-11
Identities = 34/61 (55%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Frame = +3
Query: 468 PSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV-DPKKDTIQALIVVPTRELA 644
P+P+QE +IP AL G+D+LA A+ GTGKT A+ IP LE + D + +Q LI+VPTRELA
Sbjct: 50 PTPVQEKAIPPALDGRDILATAQTGTGKTLAFIIPALEMLRDTEPCGVQVLILVPTRELA 109
Query: 645 L 647
+
Sbjct: 110 M 110
>UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=11; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 678
Score = 70.5 bits (165), Expect = 3e-11
Identities = 35/84 (41%), Positives = 54/84 (64%), Gaps = 3/84 (3%)
Frame = +3
Query: 402 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 581
EF E L L + + G+ +PIQ A+IP+AL+G+DVL A+ GTGKT A+ +P+++
Sbjct: 3 EFSELGLSPTTLQAVADTGYTTATPIQAAAIPVALAGQDVLGIAQTGTGKTAAFTLPLID 62
Query: 582 QV---DPKKDTIQALIVVPTRELA 644
++ K +AL++ PTRELA
Sbjct: 63 KLMNGRAKARMPRALVIAPTRELA 86
>UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_139_12217_14094 - Giardia lamblia
ATCC 50803
Length = 625
Score = 70.5 bits (165), Expect = 3e-11
Identities = 37/78 (47%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Frame = +3
Query: 420 LKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPK- 596
L R+L + GW+ P+ +QE IPI L+G+D L A G+GKTGA+ IP+LE++ +
Sbjct: 8 LSRQLTRAVLRLGWKFPTTVQEKVIPIVLAGRDALVSAVTGSGKTGAFGIPLLERMILRG 67
Query: 597 KDT--IQALIVVPTRELA 644
+DT ALI+ PTRELA
Sbjct: 68 RDTYGTTALILSPTRELA 85
>UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46;
n=2; Caenorhabditis elegans|Rep: Putative
uncharacterized protein mel-46 - Caenorhabditis elegans
Length = 973
Score = 70.5 bits (165), Expect = 3e-11
Identities = 32/88 (36%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Frame = +3
Query: 387 DTRGN-EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAY 563
D + N FE + ++ L + +++PSP+Q +IP+ L G+D+L +AK+GTGKT +
Sbjct: 17 DVQSNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVF 76
Query: 564 CIPVLEQVDPKKDTIQALIVVPTRELAL 647
+ +E +D + IQ +IV PTRE+++
Sbjct: 77 SVLAVENLDSRSSHIQKVIVTPTREISV 104
>UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP10
- Yarrowia lipolytica (Candida lipolytica)
Length = 926
Score = 70.5 bits (165), Expect = 3e-11
Identities = 35/78 (44%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Frame = +3
Query: 420 LKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE--QVDP 593
L + +L I KG+++P+PIQ +IP+ L GKDV+ A+ G+GKT A+ +P+LE +V
Sbjct: 109 LSQLVLKNIARKGFKQPTPIQRKTIPLVLEGKDVVGMARTGSGKTAAFVLPMLEKLKVHS 168
Query: 594 KKDTIQALIVVPTRELAL 647
K +A+I+ P+RELAL
Sbjct: 169 AKVGARAVILSPSRELAL 186
>UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=55; Lactobacillales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Enterococcus faecalis
(Streptococcus faecalis)
Length = 449
Score = 70.1 bits (164), Expect = 4e-11
Identities = 30/80 (37%), Positives = 53/80 (66%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F++F + + + EKG+E+P+ +QE IPI GK V+ +++ G+GKT + +P++++
Sbjct: 4 FKQFQFQPFINEALAEKGFEEPTEVQEKLIPIIKKGKSVIGQSQTGSGKTHTFLLPLMDK 63
Query: 585 VDPKKDTIQALIVVPTRELA 644
V P D +Q +I P+RELA
Sbjct: 64 VKPTIDEVQIVITAPSRELA 83
>UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacteroidales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 427
Score = 70.1 bits (164), Expect = 4e-11
Identities = 35/83 (42%), Positives = 54/83 (65%), Gaps = 3/83 (3%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F+E L E+L G+ + + +P+Q A+IP L G+DV+A A+ GTGKT AY +P+L++
Sbjct: 3 FDELNLGDEVLDGLDAMNFIETTPVQAATIPPILEGRDVIACAQTGTGKTAAYLLPILDR 62
Query: 585 VDP---KKDTIQALIVVPTRELA 644
+ D + A+I+ PTRELA
Sbjct: 63 LSAGEFASDVVNAVIMAPTRELA 85
>UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Saccharophagus degradans (strain 2-40 / ATCC
43961 / DSM 17024)
Length = 436
Score = 70.1 bits (164), Expect = 4e-11
Identities = 36/85 (42%), Positives = 56/85 (65%), Gaps = 3/85 (3%)
Frame = +3
Query: 402 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 581
EF E L + L + + + KP+ +Q +IP L+GKD++ AK G+GKT A+ +P+L
Sbjct: 2 EFSELGLHQSLQKALDKLTFTKPTDVQVQTIPAVLAGKDIMVSAKTGSGKTAAFLLPMLH 61
Query: 582 QV--DPKKDT-IQALIVVPTRELAL 647
+ DP+ +T +ALI++PTRELAL
Sbjct: 62 KFLNDPRPNTSTRALILLPTRELAL 86
>UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;
n=1; Cytophaga hutchinsonii ATCC 33406|Rep: Inducible
ATP-independent RNA helicase - Cytophaga hutchinsonii
(strain ATCC 33406 / NCIMB 9469)
Length = 457
Score = 70.1 bits (164), Expect = 4e-11
Identities = 35/80 (43%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIAL-SGKDVLARAKNGTGKTGAYCIPVLE 581
F + L LL + E PS IQ+ +IP+ L S K+V+ A+ GTGKT A+ +PVL+
Sbjct: 3 FSDLGLNAALLQSLSENNISSPSEIQQKAIPVILNSTKNVVGVAQTGTGKTAAFGLPVLQ 62
Query: 582 QVDPKKDTIQALIVVPTREL 641
Q++P Q L++VPTREL
Sbjct: 63 QINPSLQQTQVLVLVPTREL 82
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 70.1 bits (164), Expect = 4e-11
Identities = 30/81 (37%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
FE F ++ G+ G+++P+PIQ +IP ++G DV+ A+ GTGKT AY +P++++
Sbjct: 3 FESFNFDPAVMAGVRACGYKEPTPIQAQAIPPIMAGHDVIGLAQTGTGKTAAYALPIIQK 62
Query: 585 -VDPKKDTIQALIVVPTRELA 644
+ + ++ L++ PTRELA
Sbjct: 63 MLSTPRGRVRTLVIAPTRELA 83
>UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma
gondii|Rep: DEAD box RNA helicase - Toxoplasma gondii
Length = 479
Score = 70.1 bits (164), Expect = 4e-11
Identities = 32/81 (39%), Positives = 49/81 (60%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F L EL + GW+ P+ IQ +P AL G+D++A A+ G+GKT A+ +P+L++
Sbjct: 53 FASLGLCSELCASVSTLGWKSPTAIQSEVLPYALQGRDIIALAETGSGKTAAFGLPILQR 112
Query: 585 VDPKKDTIQALIVVPTRELAL 647
+ + ALI+ PTREL L
Sbjct: 113 LLQRTQRFYALILAPTRELCL 133
>UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 475
Score = 70.1 bits (164), Expect = 4e-11
Identities = 32/67 (47%), Positives = 44/67 (65%)
Frame = +3
Query: 444 IFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIV 623
+ G+EKPSPIQ+ I + GKD +A+A++GTGKT + I L+ +D QALI+
Sbjct: 49 VLSYGFEKPSPIQQCGIIPIIKGKDTIAQAQSGTGKTATFSIATLQVIDTSSPHTQALIL 108
Query: 624 VPTRELA 644
PTRELA
Sbjct: 109 APTRELA 115
>UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3;
Platyhelminthes|Rep: DEAD box polypeptide 19 protein -
Dugesia japonica (Planarian)
Length = 434
Score = 70.1 bits (164), Expect = 4e-11
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Frame = +3
Query: 330 KSKLKIPPKDRRIKTSDVTDTRG-NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIAL 506
K+ ++ P + IK S+ FE+ LK ELL GI G+ KPS IQE ++P+ L
Sbjct: 24 KTLVETDPINVTIKQSNADPLYSVKSFEDLQLKSELLNGISSMGFRKPSSIQERALPMLL 83
Query: 507 SG--KDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTREL 641
K+++A++++GTGKT + + +L ++D Q L + PTREL
Sbjct: 84 ENQPKNLIAQSQSGTGKTATFLLTMLSKIDVNDPFCQCLCMAPTREL 130
>UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_12,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 471
Score = 70.1 bits (164), Expect = 4e-11
Identities = 31/82 (37%), Positives = 53/82 (64%)
Frame = +3
Query: 399 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 578
++F+ F LK ELL + E G+E P+ +Q S+ AL G+ ++ +AK GTGKT + + VL
Sbjct: 73 SQFKNFGLKEELLRAVKEAGFEHPTRVQAESLTNALLGEQLICQAKAGTGKTAVFVLTVL 132
Query: 579 EQVDPKKDTIQALIVVPTRELA 644
++ + + ++ L++ TRELA
Sbjct: 133 NTINTESNKVECLVITHTRELA 154
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 70.1 bits (164), Expect = 4e-11
Identities = 32/86 (37%), Positives = 56/86 (65%), Gaps = 6/86 (6%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F+ L ++L + E+G+ +P+PIQ+ +IP L G+D++A A+ GTGKT + +P+L+
Sbjct: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62
Query: 585 VDPK------KDTIQALIVVPTRELA 644
+ + + ++ALI+ PTRELA
Sbjct: 63 LITRQPHAKGRRPVRALILTPTRELA 88
>UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP4 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 770
Score = 70.1 bits (164), Expect = 4e-11
Identities = 40/99 (40%), Positives = 60/99 (60%), Gaps = 4/99 (4%)
Frame = +3
Query: 363 RIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNG 542
+I D T+ F++ + L G+ E + K + IQ SIP++L G DVLA AK G
Sbjct: 29 KIDEYDPKITKAKFFKDLPISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTG 88
Query: 543 TGKTGAYCIPVLEQVDPKK----DTIQALIVVPTRELAL 647
+GKT A+ +PV+E++ +K D + ALI+ PTRELA+
Sbjct: 89 SGKTLAFLVPVIEKLYREKWTEFDGLGALIISPTRELAM 127
>UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=2; Alteromonadales|Rep: ATP-dependent RNA
helicase, DEAD box family - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 399
Score = 69.7 bits (163), Expect = 6e-11
Identities = 33/87 (37%), Positives = 57/87 (65%), Gaps = 5/87 (5%)
Frame = +3
Query: 399 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 578
+EF+ F L ++ + KG+++P+PIQ+ IP ++G D+L A+ GTGKT A+ +P++
Sbjct: 2 SEFKAFSLLESIIDRVNLKGYKQPTPIQKECIPALINGNDLLGIAQTGTGKTAAFSLPII 61
Query: 579 -----EQVDPKKDTIQALIVVPTRELA 644
++D K + ++LI+ PTRELA
Sbjct: 62 NKFGRNKIDIKAKSTRSLILTPTRELA 88
>UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=7; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 542
Score = 69.7 bits (163), Expect = 6e-11
Identities = 34/86 (39%), Positives = 56/86 (65%), Gaps = 5/86 (5%)
Frame = +3
Query: 402 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 581
+F + L + LL + +KG+ P+PIQ +IP+ +SG+D+L A+ GTGKT A+ +P+L
Sbjct: 66 QFTDLGLAKPLLKALTDKGYTVPTPIQAQAIPLVMSGRDLLGIAQTGTGKTAAFALPILH 125
Query: 582 QV-DPKKDT----IQALIVVPTRELA 644
++ + KK + L++ PTRELA
Sbjct: 126 RLAEDKKPAPRRGFRCLVLSPTRELA 151
>UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Algoriphagus sp. PR1|Rep: DEAD/DEAH box helicase-like
protein - Algoriphagus sp. PR1
Length = 399
Score = 69.7 bits (163), Expect = 6e-11
Identities = 35/81 (43%), Positives = 47/81 (58%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F L ++ + EKG+E + IQE SI L G+D+L + G+GKTGA+ IP++E
Sbjct: 57 FASLSLDSVMMRNLSEKGYENMTNIQEQSIEALLEGRDLLGISNTGSGKTGAFLIPIIEH 116
Query: 585 VDPKKDTIQALIVVPTRELAL 647
ALIV PTRELAL
Sbjct: 117 ALKNPGQFTALIVTPTRELAL 137
>UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein;
n=7; Actinomycetales|Rep: DEAD/DEAH box helicase domain
protein - Arthrobacter sp. (strain FB24)
Length = 585
Score = 69.7 bits (163), Expect = 6e-11
Identities = 38/111 (34%), Positives = 64/111 (57%), Gaps = 10/111 (9%)
Frame = +3
Query: 345 IPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVL 524
I P++ I + F ++ ++ +++ + + G P PIQ ++P+AL+G D++
Sbjct: 19 IEPEETIISDEKPHEIEEKSFADYNVRADIVESLADAGITHPFPIQAMTLPVALAGHDII 78
Query: 525 ARAKNGTGKTGAYCIPVLEQV----DPKKDTI------QALIVVPTRELAL 647
+AK GTGKT + IP L++V DP D + QAL++VPTRELA+
Sbjct: 79 GQAKTGTGKTLGFGIPALQRVVGRDDPGFDKLAVPGAPQALVIVPTRELAV 129
>UniRef50_Q22LR2 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Type III restriction enzyme, res subunit family protein
- Tetrahymena thermophila SB210
Length = 668
Score = 69.7 bits (163), Expect = 6e-11
Identities = 31/80 (38%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
Frame = +3
Query: 408 EEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV 587
+++ +++L + + G+EKP+PIQ S+PI + +++LA A G+GKT AYC+P+L+++
Sbjct: 212 KKYGFNQKILDNMKKAGYEKPTPIQMQSVPIIMEKRNLLALAPTGSGKTAAYCLPLLQKL 271
Query: 588 DP-KKDTIQALIVVPTRELA 644
+K+ ++ALI P+ ELA
Sbjct: 272 GTHQKNGVRALIFAPSNELA 291
>UniRef50_Q16KK0 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 591
Score = 69.7 bits (163), Expect = 6e-11
Identities = 36/98 (36%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Frame = +3
Query: 354 KDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARA 533
K R++ D + E F + +L+ I + G++ P+P+Q +IP+ L G V A A
Sbjct: 125 KGRKVAVPDPIEQFRELAERFNVSNQLIKNIEDCGYKAPTPVQMQAIPVLLEGHPVHACA 184
Query: 534 KNGTGKTGAYCIPVLEQVD-PKKDTIQALIVVPTRELA 644
G+GKT A+ IP++ + P K +AL+V PTRELA
Sbjct: 185 PTGSGKTAAFLIPIIHHLQKPMKCGFRALVVCPTRELA 222
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 69.3 bits (162), Expect = 7e-11
Identities = 30/81 (37%), Positives = 54/81 (66%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F + L +E+ + G+E P+ +Q IP+AL KD++ +++ G+GKT ++ IP+ E
Sbjct: 6 FSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGIPLCEM 65
Query: 585 VDPKKDTIQALIVVPTRELAL 647
V+ +++ QAL++ PTRELA+
Sbjct: 66 VEWEENKPQALVLTPTRELAV 86
>UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1;
Thiomicrospira crunogena XCL-2|Rep: ATP-dependent RNA
helicase - Thiomicrospira crunogena (strain XCL-2)
Length = 401
Score = 69.3 bits (162), Expect = 7e-11
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
FEE L +LL I E+ + KP+PIQ +IP L KDVLA A GTGKT A+ +P L+
Sbjct: 3 FEELDLDPKLLTAIEEQHYHKPTPIQAEAIPEMLLSKDVLAGAATGTGKTAAFVLPALQF 62
Query: 585 V--DPKKD-TIQALIVVPTRELA 644
+ DP+ + LI+ PTRELA
Sbjct: 63 LLDDPRPSRKPRVLILAPTRELA 85
>UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|Rep:
Helicase - Limnobacter sp. MED105
Length = 539
Score = 69.3 bits (162), Expect = 7e-11
Identities = 33/88 (37%), Positives = 53/88 (60%), Gaps = 8/88 (9%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL-- 578
F +F L ++ I +G+ +P+PIQ +IP+ ++G DV+ A+ GTGKT + +P+L
Sbjct: 22 FADFALHPDIQKAIDAQGYTQPTPIQAKAIPVVMTGVDVMGAAQTGTGKTAGFSLPILNR 81
Query: 579 ------EQVDPKKDTIQALIVVPTRELA 644
E P + ++ALI+ PTRELA
Sbjct: 82 LMPLATENTSPARHPVRALILTPTRELA 109
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 69.3 bits (162), Expect = 7e-11
Identities = 39/103 (37%), Positives = 56/103 (54%), Gaps = 5/103 (4%)
Frame = +3
Query: 351 PKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLAR 530
P RR + T +F L LL I E+ +E P+PIQ SIP+ L G D++
Sbjct: 44 PSHRRSRDESAVLT---DFTTLGLAEPLLRAISEQSYETPTPIQARSIPVMLEGHDLVGI 100
Query: 531 AKNGTGKTGAYCIPVLEQV-----DPKKDTIQALIVVPTRELA 644
A+ GTGKT A+ +P+L ++ P +AL++ PTRELA
Sbjct: 101 AQTGTGKTAAFVLPILHRIAANRARPAPRACRALVLAPTRELA 143
>UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=4; Flavobacteriaceae|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family protein
- Polaribacter dokdonensis MED152
Length = 373
Score = 69.3 bits (162), Expect = 7e-11
Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Frame = +3
Query: 420 LKRELLMGIFEKGWEKPSPIQEASIPIAL-SGKDVLARAKNGTGKTGAYCIPVLEQVDPK 596
++++ + I E G KP+ IQE +IP+ L S D + A+ GTGKT A+ +PVL +D
Sbjct: 9 IRKDYIKSIKEIGITKPTDIQEKAIPVLLKSPTDFIGLAQTGTGKTAAFGLPVLHHIDAN 68
Query: 597 KDTIQALIVVPTREL 641
D IQALI+ PTREL
Sbjct: 69 SDHIQALILSPTREL 83
>UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 811
Score = 69.3 bits (162), Expect = 7e-11
Identities = 40/86 (46%), Positives = 55/86 (63%), Gaps = 5/86 (5%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIP---- 572
F F + L+ I + +E+P+PIQ +IP ALSG+DVL AK G+GKT AY P
Sbjct: 267 FAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVH 326
Query: 573 VLEQVDPKK-DTIQALIVVPTRELAL 647
+++Q D K + A+IVVPTRELA+
Sbjct: 327 IMDQPDLKAGEGPVAVIVVPTRELAI 352
>UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_88_2286_3572 - Giardia lamblia ATCC
50803
Length = 428
Score = 69.3 bits (162), Expect = 7e-11
Identities = 30/72 (41%), Positives = 50/72 (69%)
Frame = +3
Query: 429 ELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTI 608
+L+ I++ G+E PSP+Q+ SIP + G+ + A+ G+GKT A+ I +L V+P+K
Sbjct: 13 DLIKAIYKYGFEIPSPVQQYSIPKLIQGQSISVNAQTGSGKTAAFGISLLSLVNPQKSIC 72
Query: 609 QALIVVPTRELA 644
QA+I+ PT+EL+
Sbjct: 73 QAVIISPTKELS 84
>UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep:
Vasa-like protein - Anopheles gambiae (African malaria
mosquito)
Length = 596
Score = 69.3 bits (162), Expect = 7e-11
Identities = 33/88 (37%), Positives = 58/88 (65%), Gaps = 7/88 (7%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
FE L+ E++ + + + KP+PIQ +IPI L+G+D++A A+ G+GKT A+ +P++
Sbjct: 176 FERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMACAQTGSGKTAAFMLPMIHH 235
Query: 585 VDPKKDTIQ-------ALIVVPTRELAL 647
+ K+D+++ +IV PTRELA+
Sbjct: 236 LLDKEDSLELRTRNPYIVIVAPTRELAI 263
>UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8;
Aconoidasida|Rep: DEAD-box helicase 1 - Plasmodium
falciparum
Length = 457
Score = 69.3 bits (162), Expect = 7e-11
Identities = 29/66 (43%), Positives = 47/66 (71%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
F++F LK ELL I E G+E PS +Q+ +IP A++G D+L +AK+G GKT + + +L+Q
Sbjct: 57 FKDFFLKPELLRAISESGFEHPSEVQQETIPAAITGTDILCQAKSGMGKTAVFVLSILQQ 116
Query: 585 VDPKKD 602
+D ++
Sbjct: 117 LDTNEN 122
>UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 598
Score = 69.3 bits (162), Expect = 7e-11
Identities = 37/85 (43%), Positives = 51/85 (60%), Gaps = 5/85 (5%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
FEE L + I + WEKP+PIQ SIP+AL G D++ AK G+GKT A+ IP +
Sbjct: 127 FEELNLPDTITKTITDNKWEKPTPIQSVSIPVALKGHDLIGIAKTGSGKTAAFLIPAMVH 186
Query: 585 V---DP--KKDTIQALIVVPTRELA 644
+ +P + D L++ PTRELA
Sbjct: 187 IGLQEPMYRGDGPIVLVLSPTRELA 211
>UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 402
Score = 69.3 bits (162), Expect = 7e-11
Identities = 31/83 (37%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Frame = +3
Query: 402 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 581
+F+ + +++ + GW KP+PIQE +I A++G+DV A+ G+GKTGA+ IP+L
Sbjct: 2 DFQALGVHPDIIAAVESMGWSKPTPIQEKTIKQAIAGEDVSGAAETGSGKTGAFLIPLLH 61
Query: 582 Q-VDPKKDTIQALIVVPTRELAL 647
Q ++ + +I+ PTREL +
Sbjct: 62 QLLEKDRPEKYGIILAPTRELVI 84
>UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 variant;
n=9; Coelomata|Rep: DEAD box polypeptide 47 isoform 1
variant - Homo sapiens (Human)
Length = 182
Score = 69.3 bits (162), Expect = 7e-11
Identities = 29/63 (46%), Positives = 44/63 (69%)
Frame = +3
Query: 456 GWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTR 635
GW KP+ IQ +IP+AL G+D++ A+ G+GKTGA+ +P+L + + AL++ PTR
Sbjct: 32 GWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQRLFALVLTPTR 91
Query: 636 ELA 644
ELA
Sbjct: 92 ELA 94
>UniRef50_P45818 Cluster: ATP-dependent RNA helicase ROK1; n=11;
Saccharomycetales|Rep: ATP-dependent RNA helicase ROK1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 564
Score = 69.3 bits (162), Expect = 7e-11
Identities = 34/79 (43%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Frame = +3
Query: 414 FCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDP 593
F + LL + E G+ +P+PIQ IP+AL+ +DVLA G+GKT A+ IP+++Q+
Sbjct: 127 FSFDKRLLNNLIENGFTEPTPIQCECIPVALNNRDVLACGPTGSGKTLAFLIPLVQQIID 186
Query: 594 KKDT--IQALIVVPTRELA 644
K T ++ LI+ PT+ELA
Sbjct: 187 DKQTAGLKGLIISPTKELA 205
>UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA
helicase 29; n=4; core eudicotyledons|Rep: Putative
DEAD-box ATP-dependent RNA helicase 29 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 845
Score = 69.3 bits (162), Expect = 7e-11
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
FE L + I +KG++ P+PIQ ++P+ LSG DV+A A+ G+GKT A+ IP+LE+
Sbjct: 30 FESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEK 89
Query: 585 VDP--KKDTIQALIVVPTRELA 644
+ + ++ALI+ PTR+LA
Sbjct: 90 LKQHVPQGGVRALILSPTRDLA 111
>UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX47;
n=32; Eukaryota|Rep: Probable ATP-dependent RNA helicase
DDX47 - Homo sapiens (Human)
Length = 455
Score = 69.3 bits (162), Expect = 7e-11
Identities = 29/63 (46%), Positives = 44/63 (69%)
Frame = +3
Query: 456 GWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTR 635
GW KP+ IQ +IP+AL G+D++ A+ G+GKTGA+ +P+L + + AL++ PTR
Sbjct: 43 GWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQRLFALVLTPTR 102
Query: 636 ELA 644
ELA
Sbjct: 103 ELA 105
>UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23;
Dikarya|Rep: ATP-dependent RNA helicase DBP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 482
Score = 69.3 bits (162), Expect = 7e-11
Identities = 33/82 (40%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Frame = +3
Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSG--KDVLARAKNGTGKTGAYCIPVL 578
F+E L ELL GI+ ++KPS IQE ++P+ L ++++A++++GTGKT A+ + +L
Sbjct: 94 FDELGLAPELLKGIYAMKFQKPSKIQERALPLLLHNPPRNMIAQSQSGTGKTAAFSLTML 153
Query: 579 EQVDPKKDTIQALIVVPTRELA 644
+V+P+ + QA+ + P+RELA
Sbjct: 154 TRVNPEDASPQAICLAPSRELA 175
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 531,334,646
Number of Sequences: 1657284
Number of extensions: 9407317
Number of successful extensions: 26181
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 24975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25687
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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