Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_F10
         (651 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    69   1e-13
AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    25   1.6  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    25   2.7  
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    24   3.6  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    23   6.3  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 69.3 bits (162), Expect = 1e-13
 Identities = 33/88 (37%), Positives = 58/88 (65%), Gaps = 7/88 (7%)
 Frame = +3

Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
           FE   L+ E++  + +  + KP+PIQ  +IPI L+G+D++A A+ G+GKT A+ +P++  
Sbjct: 176 FERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMACAQTGSGKTAAFMLPMIHH 235

Query: 585 VDPKKDTIQ-------ALIVVPTRELAL 647
           +  K+D+++        +IV PTRELA+
Sbjct: 236 LLDKEDSLELRTRNPYIVIVAPTRELAI 263


>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
 Frame = -3

Query: 580 SKTGIQ*APVLPVPFLALASTSFPLRAIGIEAS*IGDGFSHPFSKIP------INNSRFK 419
           SKT    AP+LPV      S SFP      +     DG + P S IP        +S + 
Sbjct: 39  SKTKNASAPLLPVDRFVGFSISFP------QWGCFRDGIALPVSFIPSIAFPTFRSSWYI 92

Query: 418 QNSSNSLPLVSVTSLVFILL 359
           +   N  PL+  +SL  +LL
Sbjct: 93  KQIGNMSPLMFCSSLAMVLL 112


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +3

Query: 213 RDKFGKMMTENRISSSN 263
           R K G MMTEN+ S+ N
Sbjct: 224 RKKLGSMMTENKASTFN 240


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 18  CDVVVEYRVSSPFLNFYLAILKYLV 92
           CD+V EY+  +   NF   IL ++V
Sbjct: 271 CDIVQEYKDQAAMFNFLDFILVFVV 295


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +1

Query: 466 SHLLFKRPQFLLP*VEKMYLQELRMELVKLVL 561
           +H L  +PQ  LP VE  Y +E + + ++  L
Sbjct: 546 THFLGYQPQMQLPHVEPFYRKEQQQQQLQQTL 577


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 547,034
Number of Sequences: 2352
Number of extensions: 10121
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)