Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_F10
         (651 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       61   8e-12
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   2.6  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          21   7.8  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    21   7.8  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    21   7.8  

>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 61.3 bits (142), Expect = 8e-12
 Identities = 31/90 (34%), Positives = 57/90 (63%), Gaps = 9/90 (10%)
 Frame = +3

Query: 405 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 584
           FE   L+  +L  I + G++KP+P+Q+ ++PI ++G+D++A A+ G+GKT A+ +P++  
Sbjct: 198 FEAAGLRNIVLDNIKKSGYKKPTPVQKHALPIIMNGRDLMACAQTGSGKTAAFAVPIINT 257

Query: 585 -VDPKKDTI--------QALIVVPTRELAL 647
            ++   D +        Q +IV PTREL +
Sbjct: 258 LLERSVDLVVTSTYCEPQVVIVSPTRELTI 287


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -1

Query: 591 DQPVPKLEYNKHQFYQFH 538
           +QP P  E  + +F+ FH
Sbjct: 493 EQPTPTTESEERRFFSFH 510


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 9  VNSCDVVVEYRVSSPFL 59
          +NSCD++ +   + PFL
Sbjct: 9  INSCDLLKKRNENDPFL 25


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -1

Query: 459 IPFQKYPSTILASNKT 412
           I FQKY S  L SN+T
Sbjct: 379 ISFQKYMSGTLNSNET 394


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 9   VNSCDVVVEYRVSSPFL 59
           +NSCD++ +   + PFL
Sbjct: 130 INSCDLLKKRNENDPFL 146


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,737
Number of Sequences: 438
Number of extensions: 2778
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)