Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_F08
         (440 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119262-1|AAM51122.1|  161|Drosophila melanogaster SD23244p pro...    79   4e-15
AE014297-4499|AAF56984.1|  161|Drosophila melanogaster CG15525-P...    78   5e-15
AE013599-322|AAF59277.1|  681|Drosophila melanogaster CG1850-PA ...    29   3.7  
AY061576-1|AAL29124.1|  987|Drosophila melanogaster SD02803p pro...    27   8.6  
AE013599-2147|AAF58087.2| 7210|Drosophila melanogaster CG18255-P...    27   8.6  
AE013599-2141|AAM70936.1| 9270|Drosophila melanogaster CG18255-P...    27   8.6  

>AY119262-1|AAM51122.1|  161|Drosophila melanogaster SD23244p
           protein.
          Length = 161

 Score = 78.6 bits (185), Expect = 4e-15
 Identities = 39/72 (54%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
 Frame = +3

Query: 228 LPKPKFRSYKPQDEALQESKLNDAEPTV-IEEEVKDLLEAGKEKVVLQDLDITSLAPRKP 404
           LPKP FRSYKPQ+E   + ++   EPT  IE  V+D L   ++ +V+ ++DIT+LAPRKP
Sbjct: 44  LPKPVFRSYKPQNETT-DGEILTQEPTGNIESAVEDQLSLLQQPMVIDEIDITNLAPRKP 102

Query: 405 DWDLKRXVAKKL 440
           DWDLKR  +KKL
Sbjct: 103 DWDLKRDASKKL 114


>AE014297-4499|AAF56984.1|  161|Drosophila melanogaster CG15525-PA
           protein.
          Length = 161

 Score = 78.2 bits (184), Expect = 5e-15
 Identities = 39/72 (54%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
 Frame = +3

Query: 228 LPKPKFRSYKPQDEALQESKLNDAEPTV-IEEEVKDLLEAGKEKVVLQDLDITSLAPRKP 404
           LPKP FRSYKPQ+E   + ++   EPT  IE  V+D L   ++ +V+ ++DIT+LAPRKP
Sbjct: 44  LPKPVFRSYKPQNETT-DGEILAQEPTGNIESAVEDQLSLLQQPMVIDEIDITNLAPRKP 102

Query: 405 DWDLKRXVAKKL 440
           DWDLKR  +KKL
Sbjct: 103 DWDLKRDASKKL 114


>AE013599-322|AAF59277.1|  681|Drosophila melanogaster CG1850-PA
           protein.
          Length = 681

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 14/49 (28%), Positives = 27/49 (55%)
 Frame = +3

Query: 255 KPQDEALQESKLNDAEPTVIEEEVKDLLEAGKEKVVLQDLDITSLAPRK 401
           K  D  L+E+++ +AE   IE+E +  LE+ K++++       +  P K
Sbjct: 485 KEADRRLEETRILEAERLKIEQEDRQRLESEKQELLQLKATSAATVPEK 533


>AY061576-1|AAL29124.1|  987|Drosophila melanogaster SD02803p
           protein.
          Length = 987

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
 Frame = +3

Query: 246 RSYKPQDEALQESKLN-DAEPTVIEEEVKDLLEAG-------KEKVVLQDLDITSLAPRK 401
           + +  Q EA  E+  + DAEP V + EVK+   AG       + +  L DLD T   P  
Sbjct: 509 KEHMGQVEAAAEATASEDAEPKVQDNEVKNNEVAGESPTDQQESEATLNDLDKTKTVPSP 568

Query: 402 PDWDLK 419
           P  +++
Sbjct: 569 PPSEMQ 574


>AE013599-2147|AAF58087.2| 7210|Drosophila melanogaster CG18255-PD,
            isoform D protein.
          Length = 7210

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +3

Query: 258  PQDEALQESKLNDAEPTVIEEEVKDLLEAGKEKVVLQDLDITSLAP 395
            P DE    +K++++ P   E E  D L A K  V+ +DL +    P
Sbjct: 5181 PADEKSHGAKVSESVPVKNEAEKTDQLSAKKPTVLDEDLVVPKRKP 5226


>AE013599-2141|AAM70936.1| 9270|Drosophila melanogaster CG18255-PA,
            isoform A protein.
          Length = 9270

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +3

Query: 258  PQDEALQESKLNDAEPTVIEEEVKDLLEAGKEKVVLQDLDITSLAP 395
            P DE    +K++++ P   E E  D L A K  V+ +DL +    P
Sbjct: 5181 PADEKSHGAKVSESVPVKNEAEKTDQLSAKKPTVLDEDLVVPKRKP 5226


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,325,262
Number of Sequences: 53049
Number of extensions: 231800
Number of successful extensions: 1244
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1244
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1417837128
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)