Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_F08
         (440 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC084158-2|AAK68566.1|  169|Caenorhabditis elegans Hypothetical ...    47   7e-06
Z82278-3|CAB05255.1|  347|Caenorhabditis elegans Hypothetical pr...    33   0.070
Z81509-9|CAB04158.3|  503|Caenorhabditis elegans Hypothetical pr...    31   0.37 
Z81463-12|CAB03855.3|  503|Caenorhabditis elegans Hypothetical p...    31   0.37 
Z81083-3|CAB03104.1|  559|Caenorhabditis elegans Hypothetical pr...    29   1.1  
Z47358-10|CAA87438.1|  507|Caenorhabditis elegans Hypothetical p...    28   3.5  
Z47356-9|CAA87420.1|  507|Caenorhabditis elegans Hypothetical pr...    28   3.5  
AC006677-3|AAF39952.2|  298|Caenorhabditis elegans Serpentine re...    27   4.6  
Z93398-9|CAN99698.1| 1497|Caenorhabditis elegans Hypothetical pr...    27   6.0  
Z92788-9|CAN99699.1| 1497|Caenorhabditis elegans Hypothetical pr...    27   6.0  
U43282-1|AAA83613.2|  547|Caenorhabditis elegans Hypothetical pr...    27   6.0  
U00065-9|AAA50738.2| 1009|Caenorhabditis elegans Hypothetical pr...    27   6.0  
AF003383-3|ABO16467.1|  438|Caenorhabditis elegans Cyclophylin p...    27   6.0  
Z93388-12|CAB07661.2|  294|Caenorhabditis elegans Hypothetical p...    27   8.0  
AL590342-2|CAC35859.3|  685|Caenorhabditis elegans Hypothetical ...    27   8.0  
AL032622-4|CAA21499.1|  738|Caenorhabditis elegans Y66A7A.5 prot...    27   8.0  

>AC084158-2|AAK68566.1|  169|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.21 protein.
          Length = 169

 Score = 46.8 bits (106), Expect = 7e-06
 Identities = 22/67 (32%), Positives = 41/67 (61%)
 Frame = +3

Query: 240 KFRSYKPQDEALQESKLNDAEPTVIEEEVKDLLEAGKEKVVLQDLDITSLAPRKPDWDLK 419
           +FR++KP D+A+    + D +  +++ E+ + L+    +  +  +D+  LAP+K DWDLK
Sbjct: 67  EFRNHKP-DDAVGTQNV-DMDLDIVQREITEHLKDVLHEKAIDSVDLAMLAPKKIDWDLK 124

Query: 420 RXVAKKL 440
           R +  KL
Sbjct: 125 RDIESKL 131


>Z82278-3|CAB05255.1|  347|Caenorhabditis elegans Hypothetical
           protein M162.3 protein.
          Length = 347

 Score = 33.5 bits (73), Expect = 0.070
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = -1

Query: 380 YVEILENHLFFTSLQQIFYFFFYHCWF 300
           Y +++E  L +TS+  + ++ FY CWF
Sbjct: 141 YADVIEKKLAYTSISFVLFYGFYICWF 167


>Z81509-9|CAB04158.3|  503|Caenorhabditis elegans Hypothetical
           protein F21A3.7 protein.
          Length = 503

 Score = 31.1 bits (67), Expect = 0.37
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -1

Query: 377 VEILENHLFFTSLQQIFYFFFYHCWFCII 291
           +EIL    + + L    Y FFYH W+C I
Sbjct: 445 LEILSLFFYVSVLFTTMYLFFYHDWYCAI 473


>Z81463-12|CAB03855.3|  503|Caenorhabditis elegans Hypothetical
           protein F21A3.7 protein.
          Length = 503

 Score = 31.1 bits (67), Expect = 0.37
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -1

Query: 377 VEILENHLFFTSLQQIFYFFFYHCWFCII 291
           +EIL    + + L    Y FFYH W+C I
Sbjct: 445 LEILSLFFYVSVLFTTMYLFFYHDWYCAI 473


>Z81083-3|CAB03104.1|  559|Caenorhabditis elegans Hypothetical
           protein F44F1.4 protein.
          Length = 559

 Score = 29.5 bits (63), Expect = 1.1
 Identities = 15/44 (34%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
 Frame = +3

Query: 255 KPQDEALQES--KLNDAEPTVIEEEVKDLLEAGKEKVVLQDLDI 380
           K +DE + +S  +L D +  + E++ K L+  GK++V+  D+DI
Sbjct: 402 KQKDEQIMKSMLELEDMKKLLEEKDEKILMHVGKQRVMKFDMDI 445


>Z47358-10|CAA87438.1|  507|Caenorhabditis elegans Hypothetical
           protein ZK1307.8 protein.
          Length = 507

 Score = 27.9 bits (59), Expect = 3.5
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
 Frame = +3

Query: 261 QDEALQESKLNDAEPTVIEEEV--KDLLEAGKEKVVLQDLDITSLAPRKPDWDLKRXVAK 434
           + +AL++SKL D EP   E  +   D ++   EK V +D +       +  W+  +   K
Sbjct: 156 EGQALRDSKLKDVEPLRQERALLEPDRVKFEGEKKVAEDAERKLQDEHRNQWESVKNEKK 215

Query: 435 KL 440
           KL
Sbjct: 216 KL 217


>Z47356-9|CAA87420.1|  507|Caenorhabditis elegans Hypothetical
           protein ZK1307.8 protein.
          Length = 507

 Score = 27.9 bits (59), Expect = 3.5
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
 Frame = +3

Query: 261 QDEALQESKLNDAEPTVIEEEV--KDLLEAGKEKVVLQDLDITSLAPRKPDWDLKRXVAK 434
           + +AL++SKL D EP   E  +   D ++   EK V +D +       +  W+  +   K
Sbjct: 156 EGQALRDSKLKDVEPLRQERALLEPDRVKFEGEKKVAEDAERKLQDEHRNQWESVKNEKK 215

Query: 435 KL 440
           KL
Sbjct: 216 KL 217


>AC006677-3|AAF39952.2|  298|Caenorhabditis elegans Serpentine
           receptor, class x protein28 protein.
          Length = 298

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
 Frame = -1

Query: 398 SRC*TCYVEILENHLFFTSLQQIFY---FFFYHCWFCIIKFGFL*CFIL 261
           +RC   ++ +   H+F  S + +FY    + +   FCI  + F  CF+L
Sbjct: 100 NRCCALFMPLWYTHIFSNS-KTVFYRNFIWIFSIIFCITLYEFFKCFLL 147


>Z93398-9|CAN99698.1| 1497|Caenorhabditis elegans Hypothetical
           protein ZK1151.1i protein.
          Length = 1497

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 11/31 (35%), Positives = 22/31 (70%)
 Frame = -2

Query: 361 TTFSLPASNKSFTSSSITVGSASLSLDSCNA 269
           ++F+ P+S+ S++SSS +  S S + D C++
Sbjct: 117 SSFTTPSSSSSYSSSSSSSSSNSHACDHCDS 147


>Z92788-9|CAN99699.1| 1497|Caenorhabditis elegans Hypothetical
           protein ZK1151.1i protein.
          Length = 1497

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 11/31 (35%), Positives = 22/31 (70%)
 Frame = -2

Query: 361 TTFSLPASNKSFTSSSITVGSASLSLDSCNA 269
           ++F+ P+S+ S++SSS +  S S + D C++
Sbjct: 117 SSFTTPSSSSSYSSSSSSSSSNSHACDHCDS 147


>U43282-1|AAA83613.2|  547|Caenorhabditis elegans Hypothetical
           protein T22E5.3 protein.
          Length = 547

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -3

Query: 411 PSLVFSVLNLLCRDPGEPPFLYQPPTN 331
           PS V+S+    C+D G P   YQP  N
Sbjct: 15  PSSVYSLREQCCKDLGVPEKCYQPLCN 41


>U00065-9|AAA50738.2| 1009|Caenorhabditis elegans Hypothetical
           protein D1044.6 protein.
          Length = 1009

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 16/68 (23%), Positives = 33/68 (48%)
 Frame = +3

Query: 234 KPKFRSYKPQDEALQESKLNDAEPTVIEEEVKDLLEAGKEKVVLQDLDITSLAPRKPDWD 413
           +P     +P    ++ES+ +D+   +  +  K+      E VVL+ +++    PR P+  
Sbjct: 282 RPPETPKEPVKRKMRESESDDSVIIIPRKIEKEKPRPTTENVVLKKVEMEKKRPRSPELV 341

Query: 414 LKRXVAKK 437
            K+ V +K
Sbjct: 342 PKKIVMEK 349


>AF003383-3|ABO16467.1|  438|Caenorhabditis elegans Cyclophylin
           protein 17 protein.
          Length = 438

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
 Frame = +3

Query: 255 KP-QDEALQESKLNDAEPTVIEE--EVKDLLEAGKEKVVLQDLDITSL 389
           KP +DEA +E++LN   P  +EE     ++LE   E+   ++ +IT++
Sbjct: 314 KPIEDEATEETELNTDAPEEVEEASTQAEVLEKETEETTPEEPEITTV 361


>Z93388-12|CAB07661.2|  294|Caenorhabditis elegans Hypothetical
           protein T10C6.4 protein.
          Length = 294

 Score = 26.6 bits (56), Expect = 8.0
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -1

Query: 329 FYFFFYHCWFCIIKFGFL 276
           ++FFFY+C F   +FG++
Sbjct: 130 YFFFFYNCSFPFFQFGWV 147


>AL590342-2|CAC35859.3|  685|Caenorhabditis elegans Hypothetical
           protein Y66A7A.5 protein.
          Length = 685

 Score = 26.6 bits (56), Expect = 8.0
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 231 PKPKFRSYKPQDEALQESKLNDAEPTVIEEEVKDLLEA 344
           PKPK +  K +DE ++++ +   +      E +DLLE+
Sbjct: 460 PKPKSQYSKFEDETMEKAYMRTVKMNPSSYESRDLLES 497


>AL032622-4|CAA21499.1|  738|Caenorhabditis elegans Y66A7A.5
           protein.
          Length = 738

 Score = 26.6 bits (56), Expect = 8.0
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 231 PKPKFRSYKPQDEALQESKLNDAEPTVIEEEVKDLLEA 344
           PKPK +  K +DE ++++ +   +      E +DLLE+
Sbjct: 460 PKPKSQYSKFEDETMEKAYMRTVKMNPSSYESRDLLES 497


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,882,010
Number of Sequences: 27780
Number of extensions: 119662
Number of successful extensions: 481
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 481
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 756625558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)