Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_F08
         (440 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   3.4  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   3.4  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   3.4  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          21   7.9  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          21   7.9  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          21   7.9  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          21   7.9  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          21   7.9  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          21   7.9  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          21   7.9  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    21   7.9  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 231 PKPKFRSYKPQDEALQESKLNDAEPTVI 314
           PK      K QD+ L+  K N+A+ TV+
Sbjct: 413 PKYDCTLEKSQDDCLKAIKENNADLTVV 440


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 231 PKPKFRSYKPQDEALQESKLNDAEPTVI 314
           PK      K QD+ L+  K N+A+ TV+
Sbjct: 413 PKYDCTLEKSQDDCLKAIKENNADLTVV 440


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 231 PKPKFRSYKPQDEALQESKLNDAEPTVI 314
           PK      K QD+ L+  K N+A+ TV+
Sbjct: 413 PKYDCTLEKSQDDCLKAIKENNADLTVV 440


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +3

Query: 258 PQDEALQESKLNDAEPTVIEEEVKDLLEAGKE 353
           P+D  L+      ++P    EE+K++L    E
Sbjct: 154 PEDVMLKRRTGEGSKPIFEREEIKNILNKTNE 185


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +3

Query: 258 PQDEALQESKLNDAEPTVIEEEVKDLLEAGKE 353
           P+D  L+      ++P    EE+K++L    E
Sbjct: 154 PEDVMLKRRTGEGSKPIFEREEIKNILNKTNE 185


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +3

Query: 258 PQDEALQESKLNDAEPTVIEEEVKDLLEAGKE 353
           P+D  L+      ++P    EE+K++L    E
Sbjct: 154 PEDVMLKRRTGEGSKPIFEREEIKNILNKTNE 185


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +3

Query: 258 PQDEALQESKLNDAEPTVIEEEVKDLLEAGKE 353
           P+D  L+      ++P    EE+K++L    E
Sbjct: 154 PEDVMLKRRTGEGSKPIFEREEIKNILNKTNE 185


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +3

Query: 258 PQDEALQESKLNDAEPTVIEEEVKDLLEAGKE 353
           P+D  L+      ++P    EE+K++L    E
Sbjct: 154 PEDVMLKRRTGEGSKPIFEREEIKNILNKTNE 185


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +3

Query: 258 PQDEALQESKLNDAEPTVIEEEVKDLLEAGKE 353
           P+D  L+      ++P    EE+K++L    E
Sbjct: 154 PEDVMLKRRTGEGSKPIFEREEIKNILNKTNE 185


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +3

Query: 258 PQDEALQESKLNDAEPTVIEEEVKDLLEAGKE 353
           P+D  L+      ++P    EE+K++L    E
Sbjct: 154 PEDVMLKRRTGEGSKPIFEREEIKNILNKTNE 185


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +3

Query: 258 PQDEALQESKLNDAEPTVIEEEVKDLLEAGKE 353
           P+D  L+      ++P    EE+K++L    E
Sbjct: 154 PEDVMLKRRTGEGSKPIFEREEIKNILNKTNE 185


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,163
Number of Sequences: 438
Number of extensions: 1383
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11450997
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)