Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_F04
(530 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14972-1|AAA85660.1| 165|Homo sapiens ribosomal protein S10 pro... 177 2e-44
BX255972-3|CAH73101.1| 172|Homo sapiens ribosomal protein S10 p... 177 2e-44
BX255972-2|CAH73100.1| 165|Homo sapiens ribosomal protein S10 p... 177 2e-44
BC073799-1|AAH73799.1| 165|Homo sapiens RPS10 protein protein. 177 2e-44
BC071946-1|AAH71946.1| 165|Homo sapiens ribosomal protein S10 p... 177 2e-44
BC070235-1|AAH70235.1| 165|Homo sapiens RPS10 protein protein. 177 2e-44
BC005012-1|AAH05012.1| 165|Homo sapiens RPS10 protein protein. 177 2e-44
BC001955-1|AAH01955.1| 165|Homo sapiens RPS10 protein protein. 177 2e-44
BC001032-1|AAH01032.1| 165|Homo sapiens ribosomal protein S10 p... 177 2e-44
AB209165-1|BAD92402.1| 174|Homo sapiens ribosomal protein S10 v... 175 8e-44
AB007151-1|BAA25817.1| 78|Homo sapiens ribosomal protein S10 p... 138 9e-33
AY480047-1|AAR95680.1| 4684|Homo sapiens plectin 6 protein. 127 2e-29
Z54367-1|CAA91196.1| 4684|Homo sapiens plectin protein. 122 6e-28
BC030568-1|AAH30568.1| 72|Homo sapiens LOC376693 protein protein. 94 3e-19
Z70761-1|CAA94807.1| 58|Homo sapiens ribosomal protein S10 pro... 45 1e-04
AK126796-1|BAC86698.1| 195|Homo sapiens protein ( Homo sapiens ... 31 3.3
BC105109-1|AAI05110.1| 269|Homo sapiens CCAAT/enhancer binding ... 30 5.8
S63168-1|AAB27293.1| 269|Homo sapiens CCAAT/enhancer-binding pr... 29 7.7
M83667-1|AAA59927.1| 269|Homo sapiens NF-IL6-beta protein protein. 29 7.7
>U14972-1|AAA85660.1| 165|Homo sapiens ribosomal protein S10
protein.
Length = 165
Score = 177 bits (431), Expect = 2e-44
Identities = 84/104 (80%), Positives = 92/104 (88%), Gaps = 2/104 (1%)
Frame = +1
Query: 40 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTEL--EKIPNLQVIKAMQSLKSRGYVKE 213
MLMPK+NR+AIYE LFKEGVMVAKKD H PKH EL + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 214 QFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR 345
QFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGR 103
Score = 49.6 bits (113), Expect = 7e-06
Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +2
Query: 362 RPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGPGSA-DLEFKGGYGRGR 511
RP R DR YRR+ PG DKKA+ G GSA + +F+GG+GRGR
Sbjct: 113 RPARLTRGEADRDTYRRSAVPPGA---DKKAEAGAGSATEFQFRGGFGRGR 160
>BX255972-3|CAH73101.1| 172|Homo sapiens ribosomal protein S10
protein.
Length = 172
Score = 177 bits (431), Expect = 2e-44
Identities = 84/104 (80%), Positives = 92/104 (88%), Gaps = 2/104 (1%)
Frame = +1
Query: 40 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTEL--EKIPNLQVIKAMQSLKSRGYVKE 213
MLMPK+NR+AIYE LFKEGVMVAKKD H PKH EL + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 214 QFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR 345
QFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGR 103
Score = 34.3 bits (75), Expect = 0.27
Identities = 18/38 (47%), Positives = 20/38 (52%)
Frame = +2
Query: 362 RPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGPGSA 475
RP R DR YRR+ PG DKKA+ G GSA
Sbjct: 113 RPARLTRGEADRDTYRRSAVPPGA---DKKAEAGAGSA 147
>BX255972-2|CAH73100.1| 165|Homo sapiens ribosomal protein S10
protein.
Length = 165
Score = 177 bits (431), Expect = 2e-44
Identities = 84/104 (80%), Positives = 92/104 (88%), Gaps = 2/104 (1%)
Frame = +1
Query: 40 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTEL--EKIPNLQVIKAMQSLKSRGYVKE 213
MLMPK+NR+AIYE LFKEGVMVAKKD H PKH EL + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 214 QFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR 345
QFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGR 103
Score = 49.6 bits (113), Expect = 7e-06
Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +2
Query: 362 RPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGPGSA-DLEFKGGYGRGR 511
RP R DR YRR+ PG DKKA+ G GSA + +F+GG+GRGR
Sbjct: 113 RPARLTRGEADRDTYRRSAVPPGA---DKKAEAGAGSATEFQFRGGFGRGR 160
>BC073799-1|AAH73799.1| 165|Homo sapiens RPS10 protein protein.
Length = 165
Score = 177 bits (431), Expect = 2e-44
Identities = 84/104 (80%), Positives = 92/104 (88%), Gaps = 2/104 (1%)
Frame = +1
Query: 40 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTEL--EKIPNLQVIKAMQSLKSRGYVKE 213
MLMPK+NR+AIYE LFKEGVMVAKKD H PKH EL + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 214 QFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR 345
QFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGR 103
Score = 49.6 bits (113), Expect = 7e-06
Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +2
Query: 362 RPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGPGSA-DLEFKGGYGRGR 511
RP R DR YRR+ PG DKKA+ G GSA + +F+GG+GRGR
Sbjct: 113 RPARLTRGEADRDTYRRSAVPPGA---DKKAEAGAGSATEFQFRGGFGRGR 160
>BC071946-1|AAH71946.1| 165|Homo sapiens ribosomal protein S10
protein.
Length = 165
Score = 177 bits (431), Expect = 2e-44
Identities = 84/104 (80%), Positives = 92/104 (88%), Gaps = 2/104 (1%)
Frame = +1
Query: 40 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTEL--EKIPNLQVIKAMQSLKSRGYVKE 213
MLMPK+NR+AIYE LFKEGVMVAKKD H PKH EL + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 214 QFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR 345
QFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGR 103
Score = 49.6 bits (113), Expect = 7e-06
Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +2
Query: 362 RPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGPGSA-DLEFKGGYGRGR 511
RP R DR YRR+ PG DKKA+ G GSA + +F+GG+GRGR
Sbjct: 113 RPARLTRGEADRDTYRRSAVPPGA---DKKAEAGAGSATEFQFRGGFGRGR 160
>BC070235-1|AAH70235.1| 165|Homo sapiens RPS10 protein protein.
Length = 165
Score = 177 bits (431), Expect = 2e-44
Identities = 84/104 (80%), Positives = 92/104 (88%), Gaps = 2/104 (1%)
Frame = +1
Query: 40 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTEL--EKIPNLQVIKAMQSLKSRGYVKE 213
MLMPK+NR+AIYE LFKEGVMVAKKD H PKH EL + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 214 QFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR 345
QFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGR 103
Score = 49.6 bits (113), Expect = 7e-06
Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +2
Query: 362 RPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGPGSA-DLEFKGGYGRGR 511
RP R DR YRR+ PG DKKA+ G GSA + +F+GG+GRGR
Sbjct: 113 RPARLTRGEADRDTYRRSAVPPGA---DKKAEAGAGSATEFQFRGGFGRGR 160
>BC005012-1|AAH05012.1| 165|Homo sapiens RPS10 protein protein.
Length = 165
Score = 177 bits (431), Expect = 2e-44
Identities = 84/104 (80%), Positives = 92/104 (88%), Gaps = 2/104 (1%)
Frame = +1
Query: 40 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTEL--EKIPNLQVIKAMQSLKSRGYVKE 213
MLMPK+NR+AIYE LFKEGVMVAKKD H PKH EL + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 214 QFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR 345
QFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGR 103
Score = 49.6 bits (113), Expect = 7e-06
Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +2
Query: 362 RPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGPGSA-DLEFKGGYGRGR 511
RP R DR YRR+ PG DKKA+ G GSA + +F+GG+GRGR
Sbjct: 113 RPARLTRGEADRDTYRRSAVPPGA---DKKAEAGAGSATEFQFRGGFGRGR 160
>BC001955-1|AAH01955.1| 165|Homo sapiens RPS10 protein protein.
Length = 165
Score = 177 bits (431), Expect = 2e-44
Identities = 84/104 (80%), Positives = 92/104 (88%), Gaps = 2/104 (1%)
Frame = +1
Query: 40 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTEL--EKIPNLQVIKAMQSLKSRGYVKE 213
MLMPK+NR+AIYE LFKEGVMVAKKD H PKH EL + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 214 QFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR 345
QFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGR 103
Score = 49.6 bits (113), Expect = 7e-06
Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +2
Query: 362 RPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGPGSA-DLEFKGGYGRGR 511
RP R DR YRR+ PG DKKA+ G GSA + +F+GG+GRGR
Sbjct: 113 RPARLTRGEADRDTYRRSAVPPGA---DKKAEAGAGSATEFQFRGGFGRGR 160
>BC001032-1|AAH01032.1| 165|Homo sapiens ribosomal protein S10
protein.
Length = 165
Score = 177 bits (431), Expect = 2e-44
Identities = 84/104 (80%), Positives = 92/104 (88%), Gaps = 2/104 (1%)
Frame = +1
Query: 40 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTEL--EKIPNLQVIKAMQSLKSRGYVKE 213
MLMPK+NR+AIYE LFKEGVMVAKKD H PKH EL + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 214 QFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR 345
QFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGR 103
Score = 49.6 bits (113), Expect = 7e-06
Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +2
Query: 362 RPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGPGSA-DLEFKGGYGRGR 511
RP R DR YRR+ PG DKKA+ G GSA + +F+GG+GRGR
Sbjct: 113 RPARLTRGEADRDTYRRSAVPPGA---DKKAEAGAGSATEFQFRGGFGRGR 160
>AB209165-1|BAD92402.1| 174|Homo sapiens ribosomal protein S10
variant protein.
Length = 174
Score = 175 bits (426), Expect = 8e-44
Identities = 83/105 (79%), Positives = 92/105 (87%), Gaps = 2/105 (1%)
Frame = +1
Query: 37 KMLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTEL--EKIPNLQVIKAMQSLKSRGYVK 210
+MLMPK+NR+AIYE LFKEGVMVAKKD H PKH EL + +PNL V+KAMQSLKSRGYVK
Sbjct: 9 QMLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVK 68
Query: 211 EQFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR 345
EQFAWRHFYWYLTNEGI+YLR +LHLPPEIVPA L+RS R ET R
Sbjct: 69 EQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPAILRRS-RPETGR 112
Score = 49.6 bits (113), Expect = 7e-06
Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +2
Query: 362 RPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGPGSA-DLEFKGGYGRGR 511
RP R DR YRR+ PG DKKA+ G GSA + +F+GG+GRGR
Sbjct: 122 RPARLTRGEADRDTYRRSAVPPGA---DKKAEAGAGSATEFQFRGGFGRGR 169
>AB007151-1|BAA25817.1| 78|Homo sapiens ribosomal protein S10
protein.
Length = 78
Score = 138 bits (335), Expect = 9e-33
Identities = 63/78 (80%), Positives = 69/78 (88%), Gaps = 2/78 (2%)
Frame = +1
Query: 61 RVAIYEYLFKEGVMVAKKDYHAPKHTEL--EKIPNLQVIKAMQSLKSRGYVKEQFAWRHF 234
R+AIYE LFKEGVMVAKKD H PKH EL + +PNL V+KAMQSLKSRGYVKEQFAWRHF
Sbjct: 1 RIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHF 60
Query: 235 YWYLTNEGIEYLRIFLHL 288
YWYLTNEGI+YLR +LHL
Sbjct: 61 YWYLTNEGIQYLRDYLHL 78
>AY480047-1|AAR95680.1| 4684|Homo sapiens plectin 6 protein.
Length = 4684
Score = 127 bits (307), Expect = 2e-29
Identities = 60/95 (63%), Positives = 73/95 (76%), Gaps = 1/95 (1%)
Frame = +1
Query: 40 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPK-HTELEKIPNLQVIKAMQSLKSRGYVKEQ 216
MLMP+ AIYE LF+EGVMVAKKD H + + NLQV++AM SL++RG V+E
Sbjct: 5 MLMPRDQLRAIYEVLFREGVMVAKKDRRPRSLHPHVPGVTNLQVMRAMASLRARGLVRET 64
Query: 217 FAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKR 321
FAW HFYWYLTNEGI +LR +LHLPPEIVPA+L+R
Sbjct: 65 FAWCHFYWYLTNEGIAHLRQYLHLPPEIVPASLQR 99
>Z54367-1|CAA91196.1| 4684|Homo sapiens plectin protein.
Length = 4684
Score = 122 bits (295), Expect = 6e-28
Identities = 58/95 (61%), Positives = 72/95 (75%), Gaps = 1/95 (1%)
Frame = +1
Query: 40 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPK-HTELEKIPNLQVIKAMQSLKSRGYVKEQ 216
MLMP+ AIYE LF+EGVMVAKKD H + + NLQV++AM SL++RG V+E
Sbjct: 5 MLMPRDQLRAIYEVLFREGVMVAKKDRRPRSLHPHVPGVTNLQVMRAMASLRARGLVRET 64
Query: 217 FAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKR 321
FAW HF+WYLTNEGI +LR +LHLPPEIV A+L+R
Sbjct: 65 FAWCHFFWYLTNEGIAHLRQYLHLPPEIVAASLQR 99
>BC030568-1|AAH30568.1| 72|Homo sapiens LOC376693 protein protein.
Length = 72
Score = 93.9 bits (223), Expect = 3e-19
Identities = 46/60 (76%), Positives = 51/60 (85%), Gaps = 2/60 (3%)
Frame = +1
Query: 40 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTEL--EKIPNLQVIKAMQSLKSRGYVKE 213
MLMPK+N +AIYE LFKEGVMVAKKD H PKH EL + PNL+V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNWIAIYELLFKEGVMVAKKDVHMPKHPELADKNAPNLRVMKAMQSLKSRGYVKE 60
>Z70761-1|CAA94807.1| 58|Homo sapiens ribosomal protein S10
protein.
Length = 58
Score = 45.2 bits (102), Expect = 1e-04
Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +2
Query: 362 RPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGPG-SADLEFKGGYGRGR 511
RP R DR YRR+ PG DKKA+ G G + +F+GG+GRGR
Sbjct: 7 RPARLTRGEADRDTYRRSAVPPGA---DKKAEAGLGQQPEFQFRGGFGRGR 54
>AK126796-1|BAC86698.1| 195|Homo sapiens protein ( Homo sapiens
cDNA FLJ44846 fis, clone BRACE3051144. ).
Length = 195
Score = 30.7 bits (66), Expect = 3.3
Identities = 17/54 (31%), Positives = 32/54 (59%)
Frame = -3
Query: 306 RHNFRRKVQEYSQVFNTLIG*VPVKVPPGKLFFDITSGLE*LHSFDNLEVRNLL 145
RH + ++ +++ + +G VPV++ PGKL TSG E L +++V ++L
Sbjct: 118 RHALQGQMVVIAEILDPHVGEVPVEMSPGKL-LPATSGPERLPGLHDVKVGHIL 170
>BC105109-1|AAI05110.1| 269|Homo sapiens CCAAT/enhancer binding
protein (C/EBP), delta protein.
Length = 269
Score = 29.9 bits (64), Expect = 5.8
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +2
Query: 320 AQYVQRQYAVALXGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGPGSADLEFK 490
A Q ++A G+P P RS+ R+TP APG A GP E++
Sbjct: 140 AACAQTVVSLAAAGQPTPPTSPEPPRSSPRQTP-APGPAREKSAGKRGPDRGSPEYR 195
>S63168-1|AAB27293.1| 269|Homo sapiens CCAAT/enhancer-binding
protein delta protein.
Length = 269
Score = 29.5 bits (63), Expect = 7.7
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +2
Query: 332 QRQYAVALXGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGPGSADLEFK 490
Q ++A G+P P RS+ R+TP APG A GP E++
Sbjct: 144 QTVVSLAAAGQPTPPTSPEPPRSSPRQTP-APGPAREKSAGKRGPDRGSPEYR 195
>M83667-1|AAA59927.1| 269|Homo sapiens NF-IL6-beta protein protein.
Length = 269
Score = 29.5 bits (63), Expect = 7.7
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +2
Query: 332 QRQYAVALXGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGPGSADLEFK 490
Q ++A G+P P RS+ R+TP APG A GP E++
Sbjct: 144 QTVVSLAAAGQPTPPTSPEPPRSSPRQTP-APGPAREKSAGKRGPDRGSPEYR 195
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,167,725
Number of Sequences: 237096
Number of extensions: 1638557
Number of successful extensions: 5089
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5007
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5160237082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -