Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_E24
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   3.8  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    22   5.1  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    22   5.1  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
 Frame = -3

Query: 549 IIIF*GTQFFSIKIVNVY---FVILLRYIE 469
           I++  G  F +I+ V++    FVIL RYIE
Sbjct: 168 IVVKSGVAFQTIEFVSIIRNRFVILNRYIE 197


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = -1

Query: 653 HNNSQPAS*PASRQGLSHGNSMNFRHITSPSFTDASSYSKEPSFS 519
           H++S  ++ PA+R       + +     + +F  A+S S  PSFS
Sbjct: 47  HSSSSASTSPAARMYPYVSAAHHHHQAAAAAFGAAASGSMVPSFS 91


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = -1

Query: 653 HNNSQPAS*PASRQGLSHGNSMNFRHITSPSFTDASSYSKEPSFS 519
           H++S  ++ PA+R       + +     + +F  A+S S  PSFS
Sbjct: 47  HSSSSASTSPAARMYPYVSAAHHHHQAAAAAFGAAASGSMVPSFS 91


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,967
Number of Sequences: 336
Number of extensions: 3013
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)