Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_E15
         (346 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL034488-10|CAA22454.1|   84|Caenorhabditis elegans Hypothetical...   114   2e-26
Z68159-4|CAA92285.1|  323|Caenorhabditis elegans Hypothetical pr...    28   2.1  
U64848-3|AAB04882.1|  323|Caenorhabditis elegans Hypothetical pr...    28   2.1  
AF036687-1|AAM75374.1|  173|Caenorhabditis elegans Hypothetical ...    28   2.1  
Z48809-1|CAA88745.1| 1299|Caenorhabditis elegans Hypothetical pr...    27   3.6  
Z68215-2|CAA92451.2|  452|Caenorhabditis elegans Hypothetical pr...    26   6.3  
Z46343-3|CAA86459.1|  316|Caenorhabditis elegans Hypothetical pr...    26   6.3  
Z99709-1|CAB16858.1|  488|Caenorhabditis elegans Hypothetical pr...    26   8.3  
U53154-8|AAC25846.1|  328|Caenorhabditis elegans Hypothetical pr...    26   8.3  
U13019-13|AAC24450.1|  336|Caenorhabditis elegans Serpentine rec...    26   8.3  
AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical ...    26   8.3  

>AL034488-10|CAA22454.1|   84|Caenorhabditis elegans Hypothetical
           protein Y54G11A.11 protein.
          Length = 84

 Score =  114 bits (274), Expect = 2e-26
 Identities = 48/67 (71%), Positives = 51/67 (76%)
 Frame = +3

Query: 69  ATEALDQQFNCPFCNHEKSCEVKMDRARNTARIQCRVCLEDFQTTTNVLSEPIDVYNDWV 248
           A   LD QFNCPFCNHE+ CEVKMDR +N   I CRVC EDFQT  N LSEPIDVY+DWV
Sbjct: 16  AVMPLDTQFNCPFCNHERVCEVKMDREKNVGYISCRVCSEDFQTNINYLSEPIDVYSDWV 75

Query: 249 DACESVN 269
           DACE  N
Sbjct: 76  DACEQAN 82


>Z68159-4|CAA92285.1|  323|Caenorhabditis elegans Hypothetical
           protein C33D9.4 protein.
          Length = 323

 Score = 27.9 bits (59), Expect = 2.1
 Identities = 15/58 (25%), Positives = 26/58 (44%)
 Frame = -3

Query: 239 IIYIYWLRQNICCCLEIF*TNSTLYSCSIPCAIHFYFAGFFMIAKRAVKLLIQCLCSL 66
           I+  YW  +N+     IF    T  S +  C++ F+F+ +F I   A  +      S+
Sbjct: 42  IVLTYWKSKNVSMDRHIF----TFISINFFCSLSFFFSDYFRITLPATGIFTSWCASV 95


>U64848-3|AAB04882.1|  323|Caenorhabditis elegans Hypothetical
           protein C50E3.7 protein.
          Length = 323

 Score = 27.9 bits (59), Expect = 2.1
 Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = -3

Query: 209 ICCCLEIF*TNSTLYSCSIPCAIHF-YFAGFFMIAKRAVKLLIQCLCSLSFWW 54
           IC  + +  T S++      C+++  Y + FF +    +  L +C C +S+ W
Sbjct: 136 ICIIIYVSNTESSVSKFLSQCSLYVDYCSNFFSLTVTFLMSLNRCFCFVSYTW 188


>AF036687-1|AAM75374.1|  173|Caenorhabditis elegans Hypothetical
           protein C08G9.1 protein.
          Length = 173

 Score = 27.9 bits (59), Expect = 2.1
 Identities = 18/55 (32%), Positives = 24/55 (43%)
 Frame = +3

Query: 102 PFCNHEKSCEVKMDRARNTARIQCRVCLEDFQTTTNVLSEPIDVYNDWVDACESV 266
           PF N   +C+ + D  +   R     C EDF  T   L   IDV  D  D+ + V
Sbjct: 71  PFLNAHVNCDERQDNWQEVCR-----CSEDFCNTFAFLRSSIDVRPDPKDSVQFV 120


>Z48809-1|CAA88745.1| 1299|Caenorhabditis elegans Hypothetical
           protein T01E8.3 protein.
          Length = 1299

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +1

Query: 13  QQQVWDVENQKGSHHQNERLQRHWISN 93
           +  +WD  N+K +H  +  L  +WI++
Sbjct: 288 ENSLWDPTNEKVTHDMSRPLSHYWIAS 314


>Z68215-2|CAA92451.2|  452|Caenorhabditis elegans Hypothetical
           protein C53B4.2 protein.
          Length = 452

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 13/46 (28%), Positives = 25/46 (54%)
 Frame = +2

Query: 17  NKYGTSKIKKEATTKTKGYRGTGSAI*LPVLQS*KILRSKNGSRKE 154
           +K+G+S +K +A + ++  R T   +  PV+Q   +L   +   KE
Sbjct: 45  HKHGSSVVKSKAKSVSRKMRRTKQPVVQPVVQKAAVLSPPDKKEKE 90


>Z46343-3|CAA86459.1|  316|Caenorhabditis elegans Hypothetical
           protein T23F11.4 protein.
          Length = 316

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 128 RSKNGSRKEYCTNTVSSLFRRFPN 199
           R+ NG R+E CT T  + F   PN
Sbjct: 39  RTANGDRREVCTQTDDNCFDPPPN 62


>Z99709-1|CAB16858.1|  488|Caenorhabditis elegans Hypothetical
           protein C47B2.1 protein.
          Length = 488

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 14/66 (21%), Positives = 29/66 (43%)
 Frame = -3

Query: 275 YLIHTFTSIHPVIIYIYWLRQNICCCLEIF*TNSTLYSCSIPCAIHFYFAGFFMIAKRAV 96
           Y    F+  H  I   +++  + C  L  F T    Y     C+++F    FF +   ++
Sbjct: 3   YFYSLFSLDHLFISRYWFVVCSYCSLLFYFFTVDFPYFFLTKCSLNFRITKFFCVVFGSL 62

Query: 95  KLLIQC 78
            ++++C
Sbjct: 63  NIILRC 68


>U53154-8|AAC25846.1|  328|Caenorhabditis elegans Hypothetical
           protein C33G8.5 protein.
          Length = 328

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = -3

Query: 179 NSTLYSCSIPCAIHFYFAGFFMIAKRAVKLLIQCLCSLSFWW 54
           N TLY C    + H   + + + A     ++ QC+C L+FW+
Sbjct: 167 NVTLYYCQTLASGHG--SVWTINAPLYAVMIAQCVCRLAFWY 206


>U13019-13|AAC24450.1|  336|Caenorhabditis elegans Serpentine
           receptor, class g (gamma)protein 9 protein.
          Length = 336

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 152 PCAIHFYFAGFFMIAKRAVK 93
           P  I +YF GFFM+  +AV+
Sbjct: 174 PKIIIYYFGGFFMLGLKAVE 193


>AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical
           protein ZC123.3 protein.
          Length = 1623

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 10/35 (28%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
 Frame = +3

Query: 99  CPFCN----HEKSCEVKMDRARNTARIQCRVCLED 191
           CP CN    ++++ E+ M    N   ++C  C E+
Sbjct: 104 CPKCNWHYKYQETLEIHMKEKHNDVDVKCMFCAEN 138


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,373,421
Number of Sequences: 27780
Number of extensions: 118528
Number of successful extensions: 404
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 403
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 451081596
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)