Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_E14
(551 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_1010 - 13194002-13194339,13194421-13194573,13194661-131948... 175 2e-44
07_03_1578 + 27872636-27872840,27872928-27873175,27873215-278732... 108 3e-36
03_02_0999 - 13105030-13105434,13105716-13105850,13105933-131061... 135 3e-32
03_02_0998 - 13097675-13098079,13098307-13098441,13098522-130987... 135 3e-32
09_02_0393 + 8510089-8510274,8510450-8510806,8510889-8511011,851... 33 0.15
04_03_0055 + 10299539-10299703,10300042-10300746,10301025-103011... 29 2.5
10_08_0779 - 20497718-20498773 27 7.5
07_01_0103 - 779554-780434,780542-780791 27 7.5
06_01_0131 + 1015825-1016112,1017480-1017653,1018013-1018105 27 7.5
01_05_0604 - 23583244-23584989 27 7.5
>03_02_1010 -
13194002-13194339,13194421-13194573,13194661-13194809,
13194932-13195184,13195282-13195469,13195684-13195841,
13196093-13196307,13196410-13196614
Length = 552
Score = 175 bits (426), Expect = 2e-44
Identities = 84/148 (56%), Positives = 109/148 (73%), Gaps = 2/148 (1%)
Frame = +3
Query: 111 EDLNLFLEGGLPKRK--KRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILRGIRYHF 284
++L FLE LPK K K++K +LGV++PK+G+ ISE I C V E+LRG+R HF
Sbjct: 73 DELRSFLELNLPKPKEGKKAKYSLGVVEPKVGSHISEVTGIPCQSNEFVQELLRGVRLHF 132
Query: 285 HLLIKGLTLKACSVAQLGLGHSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRI 464
I L AQLGLGHSYSRA+VKFNV+RVDNM+IQ+I LLD LDKD+N+FSMR+
Sbjct: 133 DRFISELKKSDLEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTLDKDINSFSMRV 192
Query: 465 REWYSYHFPELVSIVPENHLYTKCAEFI 548
REW+ +HFPELV IV +N++Y K A++I
Sbjct: 193 REWFGWHFPELVKIVNDNYIYAKLADYI 220
>07_03_1578 +
27872636-27872840,27872928-27873175,27873215-27873295,
27873665-27873822,27874391-27874450,27874655-27874873,
27875100-27875201,27875352-27875500,27875582-27875734,
27875839-27876194
Length = 576
Score = 108 bits (259), Expect(2) = 3e-36
Identities = 55/94 (58%), Positives = 69/94 (73%), Gaps = 20/94 (21%)
Frame = +3
Query: 327 AQLGLGHSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRI-------------- 464
AQLGLGHSYSRA+VKFNV+RVDNM+IQ+I LLD LDKD+N+FSMR+
Sbjct: 185 AQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTLDKDINSFSMRVSLFFPLFYAMINSG 244
Query: 465 ------REWYSYHFPELVSIVPENHLYTKCAEFI 548
REWYS+HFPELV IV +N++Y+K A+F+
Sbjct: 245 GESLPPREWYSWHFPELVKIVNDNYVYSKIAKFV 278
Score = 61.3 bits (142), Expect(2) = 3e-36
Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Frame = +3
Query: 111 EDLNLFLEGGLPKRK--KRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILRGIRYHF 284
++L FLE LPK K K++K ++GV++PK+G+ ISEA I C V E+LRG+R HF
Sbjct: 73 DELRSFLELNLPKVKEGKKAKYSVGVMEPKVGSHISEATGIPCQCNEFVQELLRGVRLHF 132
Query: 285 HLLIKGLTLKACSVAQLGLGH 347
I L + + A + GH
Sbjct: 133 DHFIDQLKVVDFTFALVSTGH 153
>03_02_0999 -
13105030-13105434,13105716-13105850,13105933-13106133,
13106374-13106673,13106764-13106964,13107246-13107410,
13107484-13107663,13108171-13108212,13108327-13108404
Length = 568
Score = 135 bits (326), Expect = 3e-32
Identities = 64/126 (50%), Positives = 83/126 (65%)
Frame = +3
Query: 171 TLGVLDPKLGAAISEALEIQCTHTGAVPEILRGIRYHFHLLIKGLTLKACSVAQLGLGHS 350
TL V D KLG AI E L+I C H AV E++RG+R LI GL + LGL HS
Sbjct: 84 TLAVADSKLGNAIKEKLKIDCLHNSAVMELMRGLRNQLTELISGLGAQDLGPMSLGLSHS 143
Query: 351 YSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVPENHLYT 530
SR ++KF+ +VD MIIQ+I LLD LDK++NT++MR+REWY +HFPEL IV +N Y
Sbjct: 144 LSRYKLKFSPEKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIVADNIQYA 203
Query: 531 KCAEFI 548
K + +
Sbjct: 204 KVVKMM 209
>03_02_0998 -
13097675-13098079,13098307-13098441,13098522-13098722,
13099060-13099359,13099449-13099649,13099932-13100096,
13100170-13100349,13100896-13100937,13101040-13101117
Length = 568
Score = 135 bits (326), Expect = 3e-32
Identities = 64/126 (50%), Positives = 83/126 (65%)
Frame = +3
Query: 171 TLGVLDPKLGAAISEALEIQCTHTGAVPEILRGIRYHFHLLIKGLTLKACSVAQLGLGHS 350
TL V D KLG AI E L+I C H AV E++RG+R LI GL + LGL HS
Sbjct: 84 TLAVADSKLGNAIKEKLKIDCLHNSAVMELMRGLRNQLTELISGLGAQDLGPMSLGLSHS 143
Query: 351 YSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVPENHLYT 530
SR ++KF+ +VD MIIQ+I LLD LDK++NT++MR+REWY +HFPEL IV +N Y
Sbjct: 144 LSRYKLKFSPEKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIVADNIQYA 203
Query: 531 KCAEFI 548
K + +
Sbjct: 204 KVVKMM 209
>09_02_0393 +
8510089-8510274,8510450-8510806,8510889-8511011,
8511209-8511523,8511576-8511682,8512559-8512629,
8512952-8513029,8513390-8513454,8514224-8514274,
8514373-8514414,8514785-8515105,8515154-8517880
Length = 1480
Score = 33.1 bits (72), Expect = 0.15
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
Frame = +3
Query: 114 DLNLFLEGGLPKRKKR-SKCTLGVLDP--KLGAAISEALEIQCTHTGAVPEILRGIRYHF 284
DL L + GL +++ R S+CT +LDP G + L I G + R ++ H
Sbjct: 594 DLGLIDQEGLCRKESRISRCTSSLLDPLEVYGREDEKKLIISSLLDGCLTFKKRRLKEHE 653
Query: 285 HLLIKGLTLKACSVAQLGLGHSYSRARVKFNVHRVDN 395
+ K ++ S+ +G + AR+ +N RV N
Sbjct: 654 YETCKAGAVRLISIVAMGGMGKTTLARLVYNDARVQN 690
>04_03_0055 +
10299539-10299703,10300042-10300746,10301025-10301116,
10302896-10303313
Length = 459
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = -2
Query: 268 PLKISGTAPVCVH*ISKASLMAAPSLGSSTPSVHFDRFFLFGRPPSRNRFKSSGR 104
PL + T+P+ + +++P S PS H R F+F + P+ N + GR
Sbjct: 324 PLVLHATSPLRLLCTLHGPRLSSPK-PSHQPSTHLPRCFIFPQNPTSNELELMGR 377
>10_08_0779 - 20497718-20498773
Length = 351
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
Frame = +2
Query: 233 HAYRSSPGDFERHTLSLPLAHQRSYPQS---VQCGTAWPWPLILTSSC 367
H SS + +PL H+ S+ + G AW WP L S+C
Sbjct: 69 HPISSSSSSSAASSSCVPLLHRVSWADAGGESGVGRAWAWPPSLASTC 116
>07_01_0103 - 779554-780434,780542-780791
Length = 376
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 159 RSKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILRGIRYHFH 287
+S GV + AA+ EA + G + I RG+R HFH
Sbjct: 285 KSSTRRGVAARLVQAALGEAARKREVRRGDLRRIERGVRRHFH 327
>06_01_0131 + 1015825-1016112,1017480-1017653,1018013-1018105
Length = 184
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +3
Query: 222 EIQCTHTGAVPEILR-GIRYHFHLL 293
EIQC GA+PE+L G+ Y LL
Sbjct: 152 EIQCWKEGAIPELLGWGVEYKIPLL 176
>01_05_0604 - 23583244-23584989
Length = 581
Score = 27.5 bits (58), Expect = 7.5
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 7/94 (7%)
Frame = +2
Query: 170 HTRCTGSQARSSHQRGLGNSVHAYRSSPGDFERHTLSL--PLAHQRSY--PQSVQCGTAW 337
+T +G Q ++ ++H R+S GD + H LSL P A+ SY P Q G+
Sbjct: 37 NTETSGVQETTAVASKCVPTIHFVRASSGDTDHHRLSLFSPPAYCTSYYPPLPPQPGSLA 96
Query: 338 PWPLILTSSCQVQCSPS---GQHDHTINSPARST 430
++ Q+ G++ H I P + T
Sbjct: 97 TNQIVARLMAQMNYEEGAGLGKYGHGIIDPIKPT 130
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,604,219
Number of Sequences: 37544
Number of extensions: 334131
Number of successful extensions: 822
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 821
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1245816180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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