Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_E14
(551 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71181-4|CAA94897.1| 486|Caenorhabditis elegans Hypothetical pr... 165 1e-41
AF043704-1|AAK21475.1| 487|Caenorhabditis elegans Hypothetical ... 112 2e-25
AC006708-15|AAF60425.1| 504|Caenorhabditis elegans Hypothetical... 30 1.3
Z79756-1|CAB02120.2| 494|Caenorhabditis elegans Hypothetical pr... 27 6.8
AY077615-1|AAL79359.1| 510|Caenorhabditis elegans KSR-2b protein. 27 6.8
AL137227-5|CAB70240.2| 510|Caenorhabditis elegans Hypothetical ... 27 6.8
Z82085-5|CAB04989.1| 342|Caenorhabditis elegans Hypothetical pr... 27 9.0
AL021175-7|CAE54921.1| 329|Caenorhabditis elegans Hypothetical ... 27 9.0
>Z71181-4|CAA94897.1| 486|Caenorhabditis elegans Hypothetical
protein K07C5.4 protein.
Length = 486
Score = 165 bits (402), Expect = 1e-41
Identities = 80/143 (55%), Positives = 102/143 (71%), Gaps = 1/143 (0%)
Frame = +3
Query: 114 DLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEAL-EIQCTHTGAVPEILRGIRYHFHL 290
DL FL+ LPK+KK LG+ D KL +++EA +++ G + EILRG R HF
Sbjct: 77 DLTNFLQKSLPKKKKH--VVLGINDSKLAGSLTEAFPDLKLVFGGVITEILRGTRVHFER 134
Query: 291 LIKGLTLKACSVAQLGLGHSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIRE 470
L K L + S AQL LGHSYSR++VKF+VHRVDNM+IQSIALLDQLDKD+N F MRIRE
Sbjct: 135 LAKNLPHHSLSKAQLSLGHSYSRSKVKFDVHRVDNMVIQSIALLDQLDKDINLFGMRIRE 194
Query: 471 WYSYHFPELVSIVPENHLYTKCA 539
WYSYH+PEL + P+ + Y++ A
Sbjct: 195 WYSYHYPELFRLAPDQYKYSRLA 217
>AF043704-1|AAK21475.1| 487|Caenorhabditis elegans Hypothetical
protein W01B11.3 protein.
Length = 487
Score = 112 bits (269), Expect = 2e-25
Identities = 50/125 (40%), Positives = 77/125 (61%)
Frame = +3
Query: 174 LGVLDPKLGAAISEALEIQCTHTGAVPEILRGIRYHFHLLIKGLTLKACSVAQLGLGHSY 353
L V D KLG I E L + C H ++ E++RG+R H L+ + + L + HS
Sbjct: 86 LAVGDAKLGNLIKEKLSLNCVHDSSINELMRGVRAHIEDLLAEHK-EEMNAMNLAVAHSL 144
Query: 354 SRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVPENHLYTK 533
+R +VKFN ++D MI+Q+++LLD LDK++N + MR+REWY +HFPEL + ++ Y K
Sbjct: 145 ARYKVKFNPEKIDTMIVQAVSLLDDLDKELNNYVMRVREWYGWHFPELGKTIQDHQAYAK 204
Query: 534 CAEFI 548
+ I
Sbjct: 205 IIKAI 209
>AC006708-15|AAF60425.1| 504|Caenorhabditis elegans Hypothetical
protein Y110A7A.8 protein.
Length = 504
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +3
Query: 396 MIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVPENHLYTKCAEFI 548
+I++ + +D ++N +R+ Y FPEL ++VP Y + +
Sbjct: 101 LIVKLSHVAADIDNEINVIHKFVRDKYEKRFPELETLVPNALTYLATVQLL 151
>Z79756-1|CAB02120.2| 494|Caenorhabditis elegans Hypothetical
protein F53C11.1 protein.
Length = 494
Score = 27.5 bits (58), Expect = 6.8
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = +2
Query: 239 YRSSPGDFERHTLSLPLAHQRSYPQSVQCGTAWPWPLILTSSCQVQCSPSGQHDHTINSP 418
YRS P T ++ +A+Q + S+ CG W + SPS + T+ +P
Sbjct: 313 YRSLPQQILSDTFTM-VAYQSAVSLSLTCGPYPNWGYVFPGRRGYIISPSIWNPTTLKTP 371
Query: 419 ARST 430
+ ST
Sbjct: 372 SYST 375
>AY077615-1|AAL79359.1| 510|Caenorhabditis elegans KSR-2b protein.
Length = 510
Score = 27.5 bits (58), Expect = 6.8
Identities = 20/68 (29%), Positives = 30/68 (44%)
Frame = +3
Query: 267 GIRYHFHLLIKGLTLKACSVAQLGLGHSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVN 446
GIR H L + C + +G A ++ NVH+ +I + + LD DV
Sbjct: 126 GIRVHKGCLDR--VKNDCKITTQYMGGILENAVIQKNVHKTRKLISMTTSTLD----DVT 179
Query: 447 TFSMRIRE 470
TF+ I E
Sbjct: 180 TFNSEINE 187
>AL137227-5|CAB70240.2| 510|Caenorhabditis elegans Hypothetical
protein F58D5.4b protein.
Length = 510
Score = 27.5 bits (58), Expect = 6.8
Identities = 20/68 (29%), Positives = 30/68 (44%)
Frame = +3
Query: 267 GIRYHFHLLIKGLTLKACSVAQLGLGHSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVN 446
GIR H L + C + +G A ++ NVH+ +I + + LD DV
Sbjct: 126 GIRVHKGCLDR--VKNDCKITTQYMGGILENAVIQKNVHKTRKLISMTTSTLD----DVT 179
Query: 447 TFSMRIRE 470
TF+ I E
Sbjct: 180 TFNSEINE 187
>Z82085-5|CAB04989.1| 342|Caenorhabditis elegans Hypothetical
protein ZK218.6 protein.
Length = 342
Score = 27.1 bits (57), Expect = 9.0
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -2
Query: 214 SLMAAP-SLGSSTPSVHFDRFFLFGRPPSRNRF 119
S+ P S+ S+PSV F+ + G PPS RF
Sbjct: 3 SIQCQPLSISMSSPSVLFEACAVCGGPPSSRRF 35
>AL021175-7|CAE54921.1| 329|Caenorhabditis elegans Hypothetical
protein Y6E2A.9a protein.
Length = 329
Score = 27.1 bits (57), Expect = 9.0
Identities = 19/68 (27%), Positives = 29/68 (42%)
Frame = +3
Query: 138 GLPKRKKRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILRGIRYHFHLLIKGLTLKA 317
GL K S G L P + A++ A+ I + E + HL+ K L A
Sbjct: 167 GLNMMVKNSHGLAGRLVPFVAVAVANAINIPMVRANELSEGIELCDEDDHLVAKSKQLAA 226
Query: 318 CSVAQLGL 341
++AQ+ L
Sbjct: 227 LAIAQVTL 234
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,472,572
Number of Sequences: 27780
Number of extensions: 285924
Number of successful extensions: 652
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 647
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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