Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_E13
         (579 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    23   1.9  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        23   2.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   5.7  

>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +2

Query: 374 QVQLARKFIGRGELGSVGEYRVPFL 448
           Q+QL  K I   ELG +G    PFL
Sbjct: 110 QIQLWIKQIRGAELGGLGTLIAPFL 134


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +2

Query: 206 CFVGPCTVDLHSPSLCST 259
           C  G CT++++S ++C T
Sbjct: 140 CKKGVCTMEINSDTMCVT 157


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +3

Query: 201  GCVLWDHVPWICTL 242
            GC+++    WIC+L
Sbjct: 1164 GCIIFTEGIWICSL 1177


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,723
Number of Sequences: 336
Number of extensions: 3376
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14412858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)