Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_E08
(527 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62277 Cluster: 40S ribosomal protein S13; n=117; Eukar... 138 1e-31
UniRef50_P59223 Cluster: 40S ribosomal protein S13-1; n=27; Euka... 122 5e-27
UniRef50_Q4Q3M1 Cluster: 40S ribosomal protein S13, putative; n=... 110 2e-23
UniRef50_UPI0000DA1E7F Cluster: PREDICTED: similar to ribosomal ... 109 4e-23
UniRef50_A7QVA3 Cluster: Chromosome chr2 scaffold_187, whole gen... 102 4e-21
UniRef50_Q9AW88 Cluster: 40S ribosomal protein S13; n=1; Guillar... 95 7e-19
UniRef50_P54012 Cluster: 30S ribosomal protein S15P/S13e; n=17; ... 77 2e-13
UniRef50_UPI0000E23CD6 Cluster: PREDICTED: similar to Rps13 prot... 75 1e-12
UniRef50_Q9V2K9 Cluster: 30S ribosomal protein S15P/S13e; n=19; ... 75 1e-12
UniRef50_O29457 Cluster: 30S ribosomal protein S15P/S13e; n=7; A... 71 1e-11
UniRef50_Q74MB8 Cluster: 30S ribosomal protein S15P/S13e; n=2; A... 69 9e-11
UniRef50_Q8SRB3 Cluster: 40S ribosomal protein S13; n=1; Encepha... 67 2e-10
UniRef50_Q40939 Cluster: Small subunit ribosomal protein S13; n=... 67 3e-10
UniRef50_A7DPJ7 Cluster: Ribosomal S13S15-like protein; n=1; Can... 65 1e-09
UniRef50_A0RTT1 Cluster: Ribosomal protein S15P/S13E; n=1; Cenar... 62 1e-08
UniRef50_Q9P9B8 Cluster: 30S ribosomal protein S15; n=1; uncultu... 55 9e-07
UniRef50_Q6L2H3 Cluster: 30S ribosomal protein S15P/S13e; n=4; T... 52 1e-05
UniRef50_P05762 Cluster: 30S ribosomal protein S15P/S13e; n=6; H... 42 0.009
UniRef50_Q7TP70 Cluster: Ab2-079; n=3; Eutheria|Rep: Ab2-079 - R... 38 0.11
UniRef50_Q8FV54 Cluster: Ribose ABC transporter, periplasmic D-r... 36 0.76
UniRef50_Q9SFB5 Cluster: Serine carboxypeptidase-like 27 precurs... 36 0.76
UniRef50_A1CL62 Cluster: Ribosomal protein S15, putative; n=7; E... 35 1.0
UniRef50_Q9HXW0 Cluster: UPF0341 protein PA3680; n=34; Proteobac... 33 3.1
UniRef50_A2QE31 Cluster: Remark: alternate name for S. cerevisia... 33 4.1
UniRef50_Q8G0I1 Cluster: Putative uncharacterized protein; n=3; ... 33 5.4
UniRef50_A5CAF1 Cluster: Putative uncharacterized protein; n=1; ... 33 5.4
UniRef50_A5FMM8 Cluster: Putative uncharacterized protein precur... 32 7.1
UniRef50_A7QKF0 Cluster: Chromosome chr2 scaffold_112, whole gen... 32 7.1
UniRef50_Q5CYT2 Cluster: 3CCCH domain containing protein; n=2; C... 32 7.1
UniRef50_Q4S9B3 Cluster: Chromosome undetermined SCAF14699, whol... 32 9.4
UniRef50_Q64HK2 Cluster: Blue light regulator 2; n=1; Trichoderm... 32 9.4
>UniRef50_P62277 Cluster: 40S ribosomal protein S13; n=117;
Eukaryota|Rep: 40S ribosomal protein S13 - Homo sapiens
(Human)
Length = 151
Score = 138 bits (333), Expect = 1e-31
Identities = 82/158 (51%), Positives = 96/158 (60%), Gaps = 6/158 (3%)
Frame = +2
Query: 62 MGRMHAPGKGISQXGAALPPQCPYLVEIDCRRCKGTNLQTWKEGSHS------LTNWCNA 223
MGRMHAPGKG+SQ P +++ K + K+G L +
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 224 EGFTWSCPSKIRNWQKDPPLS*RQWVXXXXXPEDLYYLIKKAVAMRKHLERNRKDKDSKF 403
+ +KI K L+ PEDLY+LIKKAVA+RKHLERNRKDKD+KF
Sbjct: 61 AQVRFVTGNKILRILKSKGLA-------PDLPEDLYHLIKKAVAVRKHLERNRKDKDAKF 113
Query: 404 RLILVESRIHRLARYYKTKSVLPPNWKYESXTASALVA 517
RLIL+ESRIHRLARYYKTK VLPPNWKYES TASALVA
Sbjct: 114 RLILIESRIHRLARYYKTKRVLPPNWKYESSTASALVA 151
Score = 120 bits (290), Expect = 2e-26
Identities = 57/66 (86%), Positives = 60/66 (90%)
Frame = +3
Query: 102 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 281
SALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILR
Sbjct: 14 SALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILR 73
Query: 282 YHEGNG 299
+ G
Sbjct: 74 ILKSKG 79
>UniRef50_P59223 Cluster: 40S ribosomal protein S13-1; n=27;
Eukaryota|Rep: 40S ribosomal protein S13-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 151
Score = 122 bits (294), Expect = 5e-27
Identities = 58/67 (86%), Positives = 60/67 (89%)
Frame = +2
Query: 317 PEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWKYESX 496
PEDLY+LIKKAVA+RKHLERNRKDKDSKFRLILVESRIHRLARYYK LPP WKYES
Sbjct: 85 PEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYEST 144
Query: 497 TASALVA 517
TAS LVA
Sbjct: 145 TASTLVA 151
Score = 94.3 bits (224), Expect = 2e-18
Identities = 44/66 (66%), Positives = 51/66 (77%)
Frame = +3
Query: 102 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 281
SALPY+RS P+WLK T DV E I K KKGLTPSQIGV+LRDSHG+ QV+ VTG KILR
Sbjct: 14 SALPYKRSSPSWLKTTPQDVDESICKFAKKGLTPSQIGVILRDSHGIPQVKSVTGSKILR 73
Query: 282 YHEGNG 299
+ +G
Sbjct: 74 ILKAHG 79
>UniRef50_Q4Q3M1 Cluster: 40S ribosomal protein S13, putative; n=39;
Eukaryota|Rep: 40S ribosomal protein S13, putative -
Leishmania major
Length = 151
Score = 110 bits (264), Expect = 2e-23
Identities = 49/67 (73%), Positives = 57/67 (85%)
Frame = +2
Query: 317 PEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWKYESX 496
PEDLY+L+K+A MRKHLER+ D+D+K+RLILVESRIHRLARYYK LPP WKYES
Sbjct: 85 PEDLYFLVKRATQMRKHLERHTTDRDTKYRLILVESRIHRLARYYKRVKQLPPTWKYESS 144
Query: 497 TASALVA 517
TASA+VA
Sbjct: 145 TASAMVA 151
Score = 81.0 bits (191), Expect = 2e-14
Identities = 38/71 (53%), Positives = 51/71 (71%)
Frame = +3
Query: 87 RVSPXSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTG 266
R SALPYRR+ P WLK+ + +V + + K +KG+ PSQIG+ LRDS G+AQV+ VTG
Sbjct: 9 RGKASSALPYRRTPPAWLKIASRNVVKMVCKSSRKGMMPSQIGMELRDSMGIAQVKNVTG 68
Query: 267 KKILRYHEGNG 299
+KILR + NG
Sbjct: 69 RKILRILKHNG 79
>UniRef50_UPI0000DA1E7F Cluster: PREDICTED: similar to ribosomal
protein S13; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S13 - Rattus norvegicus
Length = 131
Score = 109 bits (262), Expect = 4e-23
Identities = 52/67 (77%), Positives = 59/67 (88%)
Frame = +2
Query: 317 PEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWKYESX 496
P DLY+LIKKAVA++KHLERNRKDKD+KF L L ESRIH LARY KTK +LPP+WKYES
Sbjct: 65 PGDLYHLIKKAVAVQKHLERNRKDKDAKFCLSLTESRIHPLARYCKTKRMLPPSWKYESP 124
Query: 497 TASALVA 517
+ASALVA
Sbjct: 125 SASALVA 131
Score = 79.4 bits (187), Expect = 5e-14
Identities = 36/48 (75%), Positives = 40/48 (83%)
Frame = +3
Query: 102 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVA 245
S LPY SV WLK T+DD+KEQIYKL KKGLTPSQIGV LRD+HG+A
Sbjct: 14 SVLPYHHSVLMWLKSTSDDMKEQIYKLAKKGLTPSQIGVTLRDTHGLA 61
>UniRef50_A7QVA3 Cluster: Chromosome chr2 scaffold_187, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr2 scaffold_187, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 129
Score = 102 bits (245), Expect = 4e-21
Identities = 47/56 (83%), Positives = 51/56 (91%)
Frame = +2
Query: 317 PEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWK 484
PEDLY+LIKKAVA+RKHLER+RKDKDSKFRLI+VESRIHRLARYYK LPP WK
Sbjct: 74 PEDLYHLIKKAVAIRKHLERSRKDKDSKFRLIVVESRIHRLARYYKRTKKLPPVWK 129
>UniRef50_Q9AW88 Cluster: 40S ribosomal protein S13; n=1; Guillardia
theta|Rep: 40S ribosomal protein S13 - Guillardia theta
(Cryptomonas phi)
Length = 147
Score = 95.5 bits (227), Expect = 7e-19
Identities = 40/59 (67%), Positives = 52/59 (88%)
Frame = +2
Query: 317 PEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWKYES 493
PEDL++LIKKA+ ++KHLERN+KDKDSKFRLIL ES+IHRL+RYYK +P NW+++S
Sbjct: 82 PEDLFFLIKKAINIKKHLERNKKDKDSKFRLILTESKIHRLSRYYKRIQRIPINWRFDS 140
Score = 62.9 bits (146), Expect = 4e-09
Identities = 28/66 (42%), Positives = 42/66 (63%)
Frame = +3
Query: 102 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 281
S +P+ R+ P W+K + + + E I L KKGL PSQIG LRDS G+ V+ + G+ I++
Sbjct: 11 SLIPFERNAPLWVKDSKEKINEIICNLAKKGLVPSQIGSYLRDSAGIPLVKNIAGRNIVK 70
Query: 282 YHEGNG 299
+ NG
Sbjct: 71 ILKKNG 76
>UniRef50_P54012 Cluster: 30S ribosomal protein S15P/S13e; n=17;
Euryarchaeota|Rep: 30S ribosomal protein S15P/S13e -
Methanococcus jannaschii
Length = 153
Score = 77.4 bits (182), Expect = 2e-13
Identities = 52/152 (34%), Positives = 79/152 (51%), Gaps = 1/152 (0%)
Frame = +2
Query: 62 MGRMHAPGKGISQXGAALPPQCPYLVEIDCRRCKGTNLQTWKEGSHSLTNWCNAEGFTWS 241
M RMHA +G S + + P V+ + + ++ K+G S T+
Sbjct: 1 MARMHARKRGRSGSKRPVRKEVPEWVQYTPEQVEQLVVELAKKGYQSAQIGLILRD-TYG 59
Query: 242 CPS-KIRNWQKDPPLS*RQWVXXXXXPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILV 418
P K+ +K + ++ PEDL L+++AV +RKHLE++ KD SK L L+
Sbjct: 60 IPDVKLITGKKISKIM-KEHGLYPKVPEDLLNLMRRAVNLRKHLEQHPKDLHSKRGLQLI 118
Query: 419 ESRIHRLARYYKTKSVLPPNWKYESXTASALV 514
ES+I RL +YYK+K VLP +W+Y TA LV
Sbjct: 119 ESKIRRLVKYYKSKGVLPADWRYTPETARLLV 150
>UniRef50_UPI0000E23CD6 Cluster: PREDICTED: similar to Rps13
protein; n=2; Pan troglodytes|Rep: PREDICTED: similar to
Rps13 protein - Pan troglodytes
Length = 269
Score = 74.9 bits (176), Expect = 1e-12
Identities = 35/43 (81%), Positives = 38/43 (88%)
Frame = +3
Query: 102 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRD 230
SAL Y SVPTWLKLT+D+VKEQIYKL KKGLTP QIGV+LRD
Sbjct: 227 SALLYHHSVPTWLKLTSDNVKEQIYKLTKKGLTPPQIGVILRD 269
>UniRef50_Q9V2K9 Cluster: 30S ribosomal protein S15P/S13e; n=19;
Archaea|Rep: 30S ribosomal protein S15P/S13e -
Pyrococcus abyssi
Length = 158
Score = 74.9 bits (176), Expect = 1e-12
Identities = 35/66 (53%), Positives = 46/66 (69%)
Frame = +2
Query: 317 PEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWKYESX 496
PEDL +LIK+AV +RKHLE++ KD S L L+ES+I RL +YYK K LP +W+Y+
Sbjct: 92 PEDLMFLIKRAVNLRKHLEQHPKDLHSMRGLQLIESKIRRLVKYYKRKGKLPKDWRYDPE 151
Query: 497 TASALV 514
A LV
Sbjct: 152 QAKLLV 157
Score = 46.8 bits (106), Expect = 3e-04
Identities = 19/51 (37%), Positives = 32/51 (62%)
Frame = +3
Query: 102 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVR 254
S P R + P WL+ T +D++ + KL K+G + + IG +LRD +G+ V+
Sbjct: 14 SKRPPRTAPPIWLEYTVEDIENLVVKLRKEGYSTAMIGTILRDQYGIPTVK 64
>UniRef50_O29457 Cluster: 30S ribosomal protein S15P/S13e; n=7;
Archaea|Rep: 30S ribosomal protein S15P/S13e -
Archaeoglobus fulgidus
Length = 152
Score = 71.3 bits (167), Expect = 1e-11
Identities = 33/57 (57%), Positives = 43/57 (75%)
Frame = +2
Query: 317 PEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWKY 487
PEDL LIKKA+ +R HLE +RKDK ++ L L+E++I RL+ YYK K VLP +WKY
Sbjct: 85 PEDLKALIKKALKLRAHLEVHRKDKHNRRGLQLIEAKIWRLSSYYKEKGVLPADWKY 141
Score = 57.2 bits (132), Expect = 2e-07
Identities = 24/62 (38%), Positives = 43/62 (69%)
Frame = +3
Query: 114 YRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILRYHEG 293
YR S P W+ ++ ++V++++ +L +G PS IG++LRD +G+ V+ VTGKKI + +
Sbjct: 18 YRDSPPEWVDMSPEEVEKKVLELYNEGYEPSMIGMILRDRYGIPSVKQVTGKKIQKILKE 77
Query: 294 NG 299
+G
Sbjct: 78 HG 79
>UniRef50_Q74MB8 Cluster: 30S ribosomal protein S15P/S13e; n=2;
Archaea|Rep: 30S ribosomal protein S15P/S13e -
Nanoarchaeum equitans
Length = 154
Score = 68.5 bits (160), Expect = 9e-11
Identities = 30/57 (52%), Positives = 40/57 (70%)
Frame = +2
Query: 317 PEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWKY 487
P DL YL+K+A + KH+E N +D +K L+ S+IHRLA+YYK K VLP +WKY
Sbjct: 87 PWDLIYLLKRAYRVYKHIELNPRDTQAKRNYQLIISKIHRLAKYYKRKGVLPKDWKY 143
Score = 51.2 bits (117), Expect = 1e-05
Identities = 23/66 (34%), Positives = 37/66 (56%)
Frame = +3
Query: 102 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 281
S P R + P W + V+ +I +L K+G +P+ IG++LRD +G+ VR GK +
Sbjct: 16 SKRPLRTTKPEWAPYDKEFVENKIIELAKQGYSPAMIGLILRDQYGIPDVRLYIGKSLQD 75
Query: 282 YHEGNG 299
+ E G
Sbjct: 76 FLEEKG 81
>UniRef50_Q8SRB3 Cluster: 40S ribosomal protein S13; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S13
- Encephalitozoon cuniculi
Length = 148
Score = 67.3 bits (157), Expect = 2e-10
Identities = 30/56 (53%), Positives = 39/56 (69%)
Frame = +2
Query: 317 PEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWK 484
P DL L+ +A +R HL RKD +K+RLILV SR++R+ARYYK K +P NWK
Sbjct: 85 PHDLESLVHRANTLRSHLNIYRKDNSAKYRLILVSSRMYRVARYYKRKMRIPGNWK 140
Score = 59.3 bits (137), Expect = 5e-08
Identities = 24/66 (36%), Positives = 38/66 (57%)
Frame = +3
Query: 102 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 281
S PY + PTWL + D++K + ++G KG+ IG LRD +G+ + V G+ I R
Sbjct: 14 SVKPYATAFPTWLTKSVDEIKSDVIQMGNKGVPAPDIGTRLRDEYGIGKASDVLGESITR 73
Query: 282 YHEGNG 299
+ + NG
Sbjct: 74 FLQRNG 79
>UniRef50_Q40939 Cluster: Small subunit ribosomal protein S13; n=1;
Bigelowiella natans|Rep: Small subunit ribosomal protein
S13 - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 183
Score = 66.9 bits (156), Expect = 3e-10
Identities = 31/59 (52%), Positives = 41/59 (69%)
Frame = +2
Query: 317 PEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWKYES 493
PEDL+YLIKKA ++ HL + D +++ L L+ES I+RL+RYYK LP NWKY S
Sbjct: 86 PEDLFYLIKKANKIKAHLSDFKHDLANRYHLNLIESHIYRLSRYYKRIFRLPKNWKYIS 144
Score = 38.3 bits (85), Expect = 0.11
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 102 SALPYRRSVPTWLKLTADDVKEQIYKLGKKG-LTPSQIGVMLRDSHGVAQVRFVTGKKI 275
+ +PYR+ W LT+ ++ + I L K L PS+IG++LRD V R ++G I
Sbjct: 14 TTVPYRKYSCEWKGLTSQNLIKIIANLAKNNNLPPSKIGLVLRDEKLVVDTRNISGMNI 72
>UniRef50_A7DPJ7 Cluster: Ribosomal S13S15-like protein; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: Ribosomal
S13S15-like protein - Candidatus Nitrosopumilus
maritimus SCM1
Length = 149
Score = 64.9 bits (151), Expect = 1e-09
Identities = 27/62 (43%), Positives = 43/62 (69%)
Frame = +2
Query: 317 PEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWKYESX 496
PEDL ++KKAV +++HL+ N+ D+ + L L+E+++HRL+ YYK +P WKY+S
Sbjct: 85 PEDLENIVKKAVGLQRHLKENKGDRRNVRSLELIEAKVHRLSVYYKKIGRIPATWKYKSV 144
Query: 497 TA 502
A
Sbjct: 145 VA 146
Score = 52.0 bits (119), Expect = 8e-06
Identities = 24/65 (36%), Positives = 36/65 (55%)
Frame = +3
Query: 102 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 281
S P P+W+ + +++E + K K GLTPSQIG+ LRD H + ++ +T K I
Sbjct: 14 SIRPATLRAPSWITQSPAEIEELVIKYSKDGLTPSQIGIKLRDQHSIPLIKPITKKTIGE 73
Query: 282 YHEGN 296
E N
Sbjct: 74 ILEEN 78
>UniRef50_A0RTT1 Cluster: Ribosomal protein S15P/S13E; n=1;
Cenarchaeum symbiosum|Rep: Ribosomal protein S15P/S13E -
Cenarchaeum symbiosum
Length = 148
Score = 61.7 bits (143), Expect = 1e-08
Identities = 26/62 (41%), Positives = 42/62 (67%)
Frame = +2
Query: 317 PEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWKYESX 496
PEDL +++KAV +++HL N+ D+ + L L+E+++HRL YYK +P +WKY+S
Sbjct: 84 PEDLNNIVQKAVGLQRHLRANKGDRRNVRSLELIEAKVHRLDVYYKRIGRIPKDWKYKSV 143
Query: 497 TA 502
A
Sbjct: 144 VA 145
Score = 51.6 bits (118), Expect = 1e-05
Identities = 25/68 (36%), Positives = 39/68 (57%)
Frame = +3
Query: 102 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 281
S P P+W++ +V++ I K K+GL PSQIG LRD H + R +TGK + +
Sbjct: 14 SIRPSSPKAPSWIQ-GPGEVEDLIVKYAKEGLAPSQIGSKLRDQHAIPLTRPITGKSVTQ 72
Query: 282 YHEGNGSS 305
E +G++
Sbjct: 73 IMEEHGAT 80
>UniRef50_Q9P9B8 Cluster: 30S ribosomal protein S15; n=1; uncultured
marine group II euryarchaeote 37F11|Rep: 30S ribosomal
protein S15 - uncultured marine group II euryarchaeote
37F11
Length = 151
Score = 55.2 bits (127), Expect = 9e-07
Identities = 25/58 (43%), Positives = 38/58 (65%)
Frame = +2
Query: 317 PEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWKYE 490
PEDL L+++AVA+ +HL N +D +K L L E++I RL YYK + L +W+Y+
Sbjct: 85 PEDLMNLMRQAVAIIEHLTTNSRDLHNKRSLELTEAKIRRLGNYYKAEGRLDSDWRYK 142
Score = 50.0 bits (114), Expect = 3e-05
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +3
Query: 102 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKI 275
S+ P+ P W A +++ I + K G++ +QIG +LRD H V VR V GK+I
Sbjct: 14 SSKPFMTEAPEWSNKDAKEIESLILQYFKDGMSTAQIGTILRDKHAVPNVRLVLGKRI 71
>UniRef50_Q6L2H3 Cluster: 30S ribosomal protein S15P/S13e; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S15P/S13e -
Picrophilus torridus
Length = 146
Score = 51.6 bits (118), Expect = 1e-05
Identities = 25/58 (43%), Positives = 35/58 (60%)
Frame = +2
Query: 317 PEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWKYE 490
PEDL LI++ KHL N+ D ++K + L+ S++ RL RYYK S LP +W E
Sbjct: 85 PEDLQALIERYKRAMKHLSLNKHDMNNKRKAQLIMSKMLRLIRYYKRTSRLPQDWSLE 142
Score = 48.4 bits (110), Expect = 1e-04
Identities = 20/52 (38%), Positives = 33/52 (63%)
Frame = +3
Query: 120 RSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKI 275
R P+W++ + D++KE I K+ K+G+T S IG+ LRD + + R V K+
Sbjct: 20 RERPSWIQYSDDEIKEMIVKMRKQGMTKSMIGIRLRDQYAIPGTRPVLHMKL 71
>UniRef50_P05762 Cluster: 30S ribosomal protein S15P/S13e; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S15P/S13e -
Haloarcula marismortui (Halobacterium marismortui)
Length = 156
Score = 41.9 bits (94), Expect = 0.009
Identities = 23/62 (37%), Positives = 34/62 (54%)
Frame = +2
Query: 317 PEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWKYESX 496
PEDL L+++AV +R H++ N D +K L +S+I RL YY+ V N+ Y
Sbjct: 89 PEDLRNLLERAVRLRDHMDENPGDYQNKRALQNTQSKIRRLIDYYRGDEV-DENFTYSYD 147
Query: 497 TA 502
A
Sbjct: 148 NA 149
Score = 39.9 bits (89), Expect = 0.035
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Frame = +3
Query: 87 RVSPXSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDS--HG--VAQVR 254
R S S P P W + D ++ ++ +L ++G +PS+IG+ LRD G + V
Sbjct: 9 RGSSDSDKPAADEPPEWSDVDEDAIEARVVELAEQGHSPSEIGLKLRDEGVQGTPIPDVS 68
Query: 255 FVTGKKILRYHEGN 296
TGKK+ E N
Sbjct: 69 LATGKKVTEILEEN 82
>UniRef50_Q7TP70 Cluster: Ab2-079; n=3; Eutheria|Rep: Ab2-079 -
Rattus norvegicus (Rat)
Length = 481
Score = 38.3 bits (85), Expect = 0.11
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +3
Query: 102 SALPYRRSVPTWLKLTADDVK 164
SALPYRRSV WLKL +DDVK
Sbjct: 457 SALPYRRSVLMWLKLMSDDVK 477
Score = 33.9 bits (74), Expect = 2.3
Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Frame = +2
Query: 53 AANMGRMHAPGKGISQXGAALPPQCPYL--VEIDCRRCKGTNL 175
+A +GRMHAPGKG+SQ +ALP + L +++ KGTNL
Sbjct: 441 SAIVGRMHAPGKGLSQ--SALPYRRSVLMWLKLMSDDVKGTNL 481
>UniRef50_Q8FV54 Cluster: Ribose ABC transporter, periplasmic
D-ribose-binding protein; n=4; Rhizobiales|Rep: Ribose
ABC transporter, periplasmic D-ribose-binding protein -
Brucella suis
Length = 355
Score = 35.5 bits (78), Expect = 0.76
Identities = 16/44 (36%), Positives = 28/44 (63%)
Frame = +3
Query: 123 SVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVR 254
+VPTW+K T D + +++ +L K+GL +M+ D+ G AQ +
Sbjct: 57 AVPTWMKQTEDTIVDEVAQLKKEGLVKD---LMITDAQGNAQTQ 97
>UniRef50_Q9SFB5 Cluster: Serine carboxypeptidase-like 27 precursor;
n=7; Magnoliophyta|Rep: Serine carboxypeptidase-like 27
precursor - Arabidopsis thaliana (Mouse-ear cress)
Length = 459
Score = 35.5 bits (78), Expect = 0.76
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -1
Query: 140 QPGRDTAAVRQRRXGRYPYQERAYDPCLRLFT 45
+P T A+++ GRYP+ RAYDPC ++
Sbjct: 286 KPCNSTVALKRFLKGRYPWMSRAYDPCTERYS 317
>UniRef50_A1CL62 Cluster: Ribosomal protein S15, putative; n=7;
Eurotiomycetidae|Rep: Ribosomal protein S15, putative -
Aspergillus clavatus
Length = 306
Score = 35.1 bits (77), Expect = 1.0
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 335 LIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWKY 487
L K + + +HL+ KDK +K L L+ + +L RY + K P W++
Sbjct: 238 LTAKIINLSRHLQSTNKDKHNKRNLRLLVHKRQKLLRYLRKKERGGPRWQH 288
>UniRef50_Q9HXW0 Cluster: UPF0341 protein PA3680; n=34;
Proteobacteria|Rep: UPF0341 protein PA3680 - Pseudomonas
aeruginosa
Length = 261
Score = 33.5 bits (73), Expect = 3.1
Identities = 22/55 (40%), Positives = 28/55 (50%)
Frame = +3
Query: 138 LKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILRYHEGNGS 302
L L ADD E ++G++GL Q+G DS G +V FV G R G GS
Sbjct: 31 LPLAADDEAEFAVQVGEQGLQVLQLGA---DSPGPVRVDFVEGASAHRRKFGGGS 82
>UniRef50_A2QE31 Cluster: Remark: alternate name for S. cerevisiae
MRPS28: YDR337w. precursor; n=1; Aspergillus niger|Rep:
Remark: alternate name for S. cerevisiae MRPS28:
YDR337w. precursor - Aspergillus niger
Length = 280
Score = 33.1 bits (72), Expect = 4.1
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +2
Query: 335 LIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWK 484
L K + + +HL+ +KD+ +K L L+ + +L RY + K P W+
Sbjct: 212 LTAKIMNLSRHLQTTKKDRHNKRNLRLLVHKRQKLLRYLRRKERGGPRWQ 261
>UniRef50_Q8G0I1 Cluster: Putative uncharacterized protein; n=3;
Brucella|Rep: Putative uncharacterized protein -
Brucella suis
Length = 276
Score = 32.7 bits (71), Expect = 5.4
Identities = 13/42 (30%), Positives = 26/42 (61%)
Frame = +3
Query: 126 VPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQV 251
+PTWL L ++ Y+L K +TP+ IG+ + + G++++
Sbjct: 149 LPTWLGLRRGKLRPLYYRLIHKEVTPASIGITVFGNDGISRL 190
>UniRef50_A5CAF1 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 552
Score = 32.7 bits (71), Expect = 5.4
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 50 KAANMGRMHAPGKGISQXGAALPPQ-CPYLVEIDCRRCKGTNLQTWKE 190
K + +G + A G GI + Q CP+L+ +D R C G + + KE
Sbjct: 465 KLSKLGVLKAAGSGICDERLVMVGQTCPWLLHLDLRGCSGVSTKGVKE 512
>UniRef50_A5FMM8 Cluster: Putative uncharacterized protein
precursor; n=1; Flavobacterium johnsoniae UW101|Rep:
Putative uncharacterized protein precursor -
Flavobacterium johnsoniae UW101
Length = 673
Score = 32.3 bits (70), Expect = 7.1
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +3
Query: 135 WLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILRYHEGNG 299
+L +A ++ Q +KLGK + + V +DS A + + GK + Y++ +G
Sbjct: 11 FLLFSASKIEAQEFKLGKVSIAELEQKVHPKDSSAAAAILYKRGKSRIEYNDSDG 65
>UniRef50_A7QKF0 Cluster: Chromosome chr2 scaffold_112, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr2 scaffold_112, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 257
Score = 32.3 bits (70), Expect = 7.1
Identities = 19/31 (61%), Positives = 20/31 (64%)
Frame = +1
Query: 418 RVQDSQTGPLLQN*ECASS*LEI*VXHCFSS 510
R QDS T PLLQ + ASS LEI V HC S
Sbjct: 154 REQDSLTCPLLQENKEASSSLEIRVHHCHHS 184
>UniRef50_Q5CYT2 Cluster: 3CCCH domain containing protein; n=2;
Cryptosporidium|Rep: 3CCCH domain containing protein -
Cryptosporidium parvum Iowa II
Length = 591
Score = 32.3 bits (70), Expect = 7.1
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +3
Query: 132 TWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 281
T L++T D K + + K G+ GV+ R +HG A++R T K +LR
Sbjct: 154 TELRVTNDFYKTSVCRYWKMGVK-CDAGVLCRHAHGEAELRKKTNKHLLR 202
>UniRef50_Q4S9B3 Cluster: Chromosome undetermined SCAF14699, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF14699, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 440
Score = 31.9 bits (69), Expect = 9.4
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Frame = +2
Query: 65 GRMHAPGKGISQXGAALPPQCP---YLVEIDCRRCKGTNLQTWKEGSHSLTNWCNAEGFT 235
G H G+G Q GA PP + E+ C G Q +EG S A G +
Sbjct: 247 GGRHQRGQGPQQAGARAPPHGEFQWFSAEVHRGCCGG---QKEREGGESEEGIRTAAGIS 303
Query: 236 WSCPSKIRNWQKD 274
W PS + +W+ D
Sbjct: 304 WEDPS-LLDWETD 315
>UniRef50_Q64HK2 Cluster: Blue light regulator 2; n=1; Trichoderma
atroviride|Rep: Blue light regulator 2 - Trichoderma
atroviride (Hypocrea atroviridis)
Length = 484
Score = 31.9 bits (69), Expect = 9.4
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +2
Query: 140 EIDCRRCKGTNLQTWKEGSHSLTNWCNAEGFTWSCPSKIRNWQKDPPLS 286
E C C + W++G + CNA G W+ K RN PLS
Sbjct: 427 EYVCTDCGTLDSPEWRKGPNGPKTLCNACGLRWAKKEKKRNNSIGTPLS 475
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 505,125,543
Number of Sequences: 1657284
Number of extensions: 9680546
Number of successful extensions: 23925
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 23233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23921
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33455602480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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