Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_E08
         (527 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         23   2.2  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   2.9  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        22   2.9  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   3.8  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    22   3.8  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   3.8  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   8.9  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    21   8.9  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   8.9  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   8.9  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   8.9  

>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 300 THCLHDSGGSFCQLRILLG 244
           T CL + GG+  QL  LLG
Sbjct: 96  TFCLQEEGGTTSQLIELLG 114


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 434 RLARYYKTKSVLPPNWK 484
           RL  Y  T+SVL  +WK
Sbjct: 159 RLRMYINTESVLDGDWK 175


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = -2

Query: 364 LSHCNSFLD 338
           LSHCNS++D
Sbjct: 246 LSHCNSYVD 254


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -1

Query: 275 DLFASYESYLGNSM*IPQHYTN 210
           D + +Y S + N+  +P HY+N
Sbjct: 20  DNYYNYTSDIPNAQQMPPHYSN 41


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -1

Query: 275 DLFASYESYLGNSM*IPQHYTN 210
           D + +Y S + N+  +P HY+N
Sbjct: 20  DNYYNYTSDIPNAQQMPPHYSN 41


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -1

Query: 275 DLFASYESYLGNSM*IPQHYTN 210
           D + +Y S + N+  +P HY+N
Sbjct: 20  DNYYNYTSDIPNAQQMPPHYSN 41


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 109 SAXLGDTLTRSVHTTHVCG 53
           S  LG T+TR++    +CG
Sbjct: 326 SHCLGGTITRTMWYFQICG 344


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +2

Query: 116 PPQCPYLVEIDCR 154
           PP+CP + E  C+
Sbjct: 30  PPRCPPIYEPSCQ 42


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +2

Query: 71  MHAPGKGISQXGAALPPQCPYL 136
           M  PG+ +   G  L P  PY+
Sbjct: 1   MDDPGRMMGHTGGGLMPPQPYM 22


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -3

Query: 297 HCLHDSGGSFCQLRI 253
           HC     GS+CQ  I
Sbjct: 171 HCSDGYSGSYCQTEI 185


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 224 QHYTNL*GSETLLS 183
           QHYTN+   E ++S
Sbjct: 502 QHYTNIISQEQIIS 515


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,008
Number of Sequences: 336
Number of extensions: 2362
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12782794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)