Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_E08
(527 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0120 - 957365-957552,957642-957780,957847-957970,958398-95... 107 5e-24
08_01_0119 - 951492-951679,951780-951918,952023-952095,952196-95... 107 5e-24
07_03_0978 + 23099690-23100108,23100530-23100564,23100868-231009... 95 2e-20
02_05_0301 - 27687297-27687547,27687637-27687775,27689150-27689416 95 4e-20
01_06_1243 - 35681569-35681712,35681799-35681904,35682054-356821... 35 0.046
05_03_0230 - 10687056-10687059,10687108-10687203,10688392-106885... 30 1.0
03_06_0600 + 34988743-34989407,34990033-34990051 29 3.1
06_03_0742 + 24027506-24027721,24028835-24029004,24029893-240300... 27 7.1
02_02_0211 + 7898434-7898574,7898759-7899349,7899575-7899821,790... 27 7.1
01_06_0027 - 25742122-25742310,25742481-25742553,25743219-25744159 27 7.1
10_07_0062 - 12499872-12501350 27 9.3
04_04_0440 - 25219961-25221529 27 9.3
01_05_0356 - 21338488-21340062 27 9.3
01_01_1024 + 8083372-8083758,8083970-8084149,8084261-8084590,808... 27 9.3
>08_01_0120 -
957365-957552,957642-957780,957847-957970,958398-958486
Length = 179
Score = 107 bits (257), Expect = 5e-24
Identities = 49/56 (87%), Positives = 51/56 (91%)
Frame = +2
Query: 317 PEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWK 484
PEDLY+LIKKAVA+RKHLERNRKDKDSKFRLILVESRIHRLARYYK LPP WK
Sbjct: 124 PEDLYFLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPTWK 179
Score = 67.3 bits (157), Expect = 7e-12
Identities = 39/83 (46%), Positives = 48/83 (57%), Gaps = 17/83 (20%)
Frame = +3
Query: 102 SALPYRRSVPTWLKLTADDV-----------------KEQIYKLGKKGLTPSQIGVMLRD 230
SALPY+R+ P+WLK A DV +E I K KKG PSQIGV+LRD
Sbjct: 36 SALPYKRTPPSWLKTAASDVGAFSFLSLSRLALFHLVEEMIMKAAKKGQMPSQIGVVLRD 95
Query: 231 SHGVAQVRFVTGKKILRYHEGNG 299
HG+ V+ VTG KILR + +G
Sbjct: 96 QHGIPLVKSVTGSKILRILKAHG 118
>08_01_0119 -
951492-951679,951780-951918,952023-952095,952196-952218
Length = 140
Score = 107 bits (257), Expect = 5e-24
Identities = 49/56 (87%), Positives = 51/56 (91%)
Frame = +2
Query: 317 PEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWK 484
PEDLY+LIKKAVA+RKHLERNRKDKDSKFRLILVESRIHRLARYYK LPP WK
Sbjct: 85 PEDLYFLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPTWK 140
Score = 81.8 bits (193), Expect = 3e-16
Identities = 37/66 (56%), Positives = 48/66 (72%)
Frame = +3
Query: 102 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 281
SA+PY+R+ P+W+K A DV+E I K KKG PSQIGV+LRD HG+ V+ VTG KILR
Sbjct: 14 SAIPYKRTPPSWVKTAAADVEEMIMKAAKKGQMPSQIGVVLRDQHGIPLVKSVTGSKILR 73
Query: 282 YHEGNG 299
+ +G
Sbjct: 74 ILKAHG 79
>07_03_0978 +
23099690-23100108,23100530-23100564,23100868-23100926,
23101269-23101310,23102003-23102065,23102172-23102253,
23102570-23102609,23102657-23102753
Length = 278
Score = 95.5 bits (227), Expect = 2e-20
Identities = 43/56 (76%), Positives = 49/56 (87%)
Frame = +2
Query: 317 PEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWK 484
PEDLY+LIKKAVAMRKHLERNRKDKD+KFRLILVESR+HRL RYY+ +P +K
Sbjct: 85 PEDLYFLIKKAVAMRKHLERNRKDKDTKFRLILVESRVHRLTRYYRLAKKIPAFFK 140
Score = 74.9 bits (176), Expect = 4e-14
Identities = 34/66 (51%), Positives = 45/66 (68%)
Frame = +3
Query: 102 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 281
S LPYRR+ P W+K +A +V+E I ++ KKG PSQIG +LRD+H V + VTG KILR
Sbjct: 14 SVLPYRRAAPAWVKTSASEVEEMIVRVAKKGQLPSQIGAILRDAHAVPLAQGVTGGKILR 73
Query: 282 YHEGNG 299
+ G
Sbjct: 74 VLKSRG 79
>02_05_0301 - 27687297-27687547,27687637-27687775,27689150-27689416
Length = 218
Score = 94.7 bits (225), Expect = 4e-20
Identities = 44/52 (84%), Positives = 46/52 (88%)
Frame = +2
Query: 320 EDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPP 475
EDLY+LIKKAVA+RKHLERNRKDKDS FRLILVESRIHRL RYYK LPP
Sbjct: 143 EDLYFLIKKAVAIRKHLERNRKDKDSSFRLILVESRIHRLVRYYKRTKKLPP 194
Score = 42.3 bits (95), Expect = 2e-04
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +3
Query: 156 DVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILRYHEGNG 299
+V+E I K K G SQIGV+LR HG+ V+ + KIL + +G
Sbjct: 89 EVEEMIMKAAKMGQMSSQIGVVLRHQHGIPLVKSIASSKILHILKAHG 136
>01_06_1243 -
35681569-35681712,35681799-35681904,35682054-35682149,
35682234-35682361,35683000-35683260,35683343-35683428,
35683524-35683616,35683720-35683815,35683946-35684300
Length = 454
Score = 34.7 bits (76), Expect = 0.046
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -1
Query: 140 QPGRDTAAVRQRRXGRYPYQERAYDPCLRLFT 45
+P +TA+++ GRYP+ RAYDPC ++
Sbjct: 281 KPCNNTASLKLGLGGRYPWLSRAYDPCTERYS 312
>05_03_0230 -
10687056-10687059,10687108-10687203,10688392-10688519,
10688688-10688966,10689290-10689375,10689655-10689750,
10689859-10690243
Length = 357
Score = 30.3 bits (65), Expect = 1.0
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = -1
Query: 125 TAAVRQRRX--GRYPYQERAYDPCLRLFT 45
+AA RQRR G YP+ +YDPC ++
Sbjct: 269 SAAARQRRLKQGHYPWMTGSYDPCTERYS 297
>03_06_0600 + 34988743-34989407,34990033-34990051
Length = 227
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
Frame = +2
Query: 59 NMGRMHAPGKGISQXGAALPPQCPYLV---EIDCRRCKGTNLQTWKEGSHSLT-NWCNAE 226
N+ +H PG S + PP P I CR+C+G+ +G + CN
Sbjct: 134 NLSLLHPPGSAASPSVSCPPPPPPPPPGPRRISCRKCRGSFFTVVGDGVSGVNCVHCNRW 193
Query: 227 GFTWSCPSK 253
+ CP++
Sbjct: 194 VSLFPCPAR 202
>06_03_0742 +
24027506-24027721,24028835-24029004,24029893-24030052,
24030162-24030455,24031490-24031717,24031827-24032006,
24032079-24032238,24032591-24032617,24033426-24033613,
24034269-24034532,24035123-24035218,24035311-24035399,
24035473-24035620,24035842-24036051,24036141-24036440,
24037906-24038248,24038747-24038952,24039071-24039273,
24040021-24040117,24040148-24040222,24040328-24040602,
24041116-24041256,24041469-24042339,24042481-24042520,
24042605-24043050
Length = 1808
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 117 RRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRD 230
RRS +++ D +KE + GKK L +++ +L+D
Sbjct: 326 RRSTNETRRISDDTIKEMVASSGKKHLLTTEVESILKD 363
>02_02_0211 +
7898434-7898574,7898759-7899349,7899575-7899821,
7900020-7900118,7900158-7900321,7900371-7900870,
7901007-7901256,7901461-7901549,7901823-7902064,
7902175-7902479,7902798-7902906,7903150-7903313
Length = 966
Score = 27.5 bits (58), Expect = 7.1
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +3
Query: 156 DVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILRYHEGNGSSSXTYRRIFT 332
D+++Q +LG G+ P+ + R +G + +++ R +G+GSSS + R T
Sbjct: 660 DLRQQWGRLGPPGVRPNTLVRRNRPGNGSLPLFARMRRRLSRLFKGSGSSSSHHDRSST 718
>01_06_0027 - 25742122-25742310,25742481-25742553,25743219-25744159
Length = 400
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +2
Query: 50 KAANMGRMHAPGKGISQXGAALPPQCPYLVEIDCRRCKGTNLQ 178
KAA + H P G ++ G +PP+ + + RR L+
Sbjct: 238 KAARLDHQHGPVAGAAENGGDVPPEVAAVAAVGERRTTSVALR 280
>10_07_0062 - 12499872-12501350
Length = 492
Score = 27.1 bits (57), Expect = 9.3
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 66 VVCTLLVRVSPXSALPYRRSVPTWLKLTAD 155
V+C +LVR+ S L R W +LT+D
Sbjct: 150 VLCEILVRLPARSVLRCRAVCTAWRRLTSD 179
>04_04_0440 - 25219961-25221529
Length = 522
Score = 27.1 bits (57), Expect = 9.3
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 7/60 (11%)
Frame = +2
Query: 50 KAANMGRMHAPGKGISQXGA-ALPPQCPYLVEIDCRRCKGT------NLQTWKEGSHSLT 208
+ A + ++ G +S G AL CP LV++ +RC+G NL+ + GS S++
Sbjct: 392 RCAALKKLCIKGCPVSDRGMWALNGGCPSLVKVKLKRCRGVSYECIENLKVVRGGSFSIS 451
>01_05_0356 - 21338488-21340062
Length = 524
Score = 27.1 bits (57), Expect = 9.3
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = -1
Query: 134 GRDTAAVRQRRXGRYPYQERAYDPCLRLFTKSPI 33
G+D +A+ + GR PY + +RL + P+
Sbjct: 356 GKDQSAIEEHDAGRLPYLQAVLKESMRLHSVGPL 389
>01_01_1024 +
8083372-8083758,8083970-8084149,8084261-8084590,
8084679-8084792,8084942-8085682
Length = 583
Score = 27.1 bits (57), Expect = 9.3
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 117 GKAAPXWEIPLPGACIRPMFA 55
G AP +++PLPG + P FA
Sbjct: 444 GAPAPQFQVPLPGGGMAPAFA 464
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,978,673
Number of Sequences: 37544
Number of extensions: 279975
Number of successful extensions: 756
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 755
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1166441080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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