Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_E06
(656 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 134 8e-33
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 99 5e-22
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 97 3e-21
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 83 3e-17
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 72 6e-14
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 55 8e-09
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 55 1e-08
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 42 8e-05
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 35 0.012
SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces pom... 26 5.5
SPAPB15E9.02c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 26 5.5
SPAC4G8.11c |atp10||F1-F0 ATPase assembly protein|Schizosaccharo... 25 7.3
SPAC17A2.09c |csx1||RNA-binding protein Csx1|Schizosaccharomyces... 25 9.6
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 134 bits (325), Expect = 8e-33
Identities = 66/112 (58%), Positives = 76/112 (67%)
Frame = +1
Query: 319 KGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVI 498
+GPKVT V FD++ GD+ +G + IGLFGKTVPKT ENF LA +G GY+GS FHRVI
Sbjct: 21 RGPKVTDTVYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSIFHRVI 80
Query: 499 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNG 654
NFMIQ +SIYG RF DENFKL H G LSMANAG D+NG
Sbjct: 81 PNFMIQGGDITKGDGTGGKSIYGSRFPDENFKLSHQRPGLLSMANAGPDSNG 132
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 99.1 bits (236), Expect = 5e-22
Identities = 51/102 (50%), Positives = 58/102 (56%)
Frame = +1
Query: 349 FDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXX 528
FD+ +G IV LF VPKT NF L +G GY GS FHRVI FM+Q
Sbjct: 6 FDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGDF 65
Query: 529 XXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNG 654
+SIYGE+F DENF LKH G LSMANAG +TNG
Sbjct: 66 TRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNG 107
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 96.7 bits (230), Expect = 3e-21
Identities = 56/109 (51%), Positives = 64/109 (58%), Gaps = 4/109 (3%)
Frame = +1
Query: 340 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG----YKGSKFHRVIKNF 507
K+S D KI TI LF VPKT +NF L E +G YKGS+FHRVIKNF
Sbjct: 8 KISIDGKIQP----TIYFELFDNVVPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNF 63
Query: 508 MIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNG 654
M+Q SIYGE+FEDENF+LKH LSMANAG +TNG
Sbjct: 64 MLQGGDFTRGNGTGGESIYGEKFEDENFELKHDKPFLLSMANAGPNTNG 112
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 83.4 bits (197), Expect = 3e-17
Identities = 53/113 (46%), Positives = 60/113 (53%), Gaps = 9/113 (7%)
Frame = +1
Query: 343 VSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLA--------QKPEGEGYKGSKFHRVI 498
V D+ I +G I I LF VPKT ENF Q QKP G YK S FHR+I
Sbjct: 7 VFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIG--YKNSTFHRII 64
Query: 499 KNFMIQXXXXXXXXXXXXRSIYGER-FEDENFKLKHYGAGWLSMANAGKDTNG 654
+ FMIQ +I+ R F DENF LKH G LSMANAGKD+NG
Sbjct: 65 QGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNG 117
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 72.1 bits (169), Expect = 6e-14
Identities = 44/94 (46%), Positives = 59/94 (62%), Gaps = 1/94 (1%)
Frame = +1
Query: 373 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 552
++G I+I L+ + PKT +NF+ LA+ EG Y G FHRVI +F+IQ
Sbjct: 9 SLGKILIELYTEHAPKTCQNFYTLAK--EGY-YDGVIFHRVIPDFVIQGGDPTGTGRGGT 65
Query: 553 RSIYGERFEDE-NFKLKHYGAGWLSMANAGKDTN 651
SIYG++F+DE + L H GAG LSMANAG +TN
Sbjct: 66 -SIYGDKFDDEIHSDLHHTGAGILSMANAGPNTN 98
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 55.2 bits (127), Expect = 8e-09
Identities = 38/93 (40%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Frame = +1
Query: 379 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 558
G I I L+ + PK +NF A E Y + FHR+IKNFMIQ S
Sbjct: 464 GDISIKLYPEEAPKAVQNFTTHA---ENGYYDNTIFHRIIKNFMIQ-GGDPLGDGTGGES 519
Query: 559 IYGERFEDE-NFKLKHYGAGWLSMANAGKDTNG 654
I+ + FEDE + LKH +SMAN+G +TNG
Sbjct: 520 IWKKDFEDEISPNLKHDRPFTVSMANSGPNTNG 552
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 54.8 bits (126), Expect = 1e-08
Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Frame = +1
Query: 373 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 552
N G I I L P NF QLA++ Y+ + FHR I FMIQ
Sbjct: 283 NHGEINIELHTDYAPHAVYNFVQLAKQGY---YRNTIFHRNIARFMIQGGDPSGTGRGG- 338
Query: 553 RSIYGERFEDENFK-LKHYGAGWLSMANAGKDTNG 654
+SI+G+ F+DE LKH G +SMAN GK+TNG
Sbjct: 339 QSIWGKPFKDEFCNPLKHDDRGIISMANRGKNTNG 373
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 41.9 bits (94), Expect = 8e-05
Identities = 34/92 (36%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +1
Query: 379 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 558
G I I L+ K VPK NF QL EG Y G+ HRV+ F+IQ S
Sbjct: 22 GDIQIELWCKEVPKACRNFIQLCL--EGY-YDGTIVHRVVPEFLIQ-GGDPTGTGMGGES 77
Query: 559 IYGERFEDENF-KLKHYGAGWLSMANAGKDTN 651
IYGE F E +L+ G + MA + N
Sbjct: 78 IYGEPFAVETHPRLRFIRRGLVGMACTENEGN 109
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 34.7 bits (76), Expect = 0.012
Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 7/97 (7%)
Frame = +1
Query: 367 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXX 546
+ +G +VI LF K PKT ENF +L + + Y F+ + N+ Q
Sbjct: 6 ETTVGDLVIDLFVKEAPKTCENFLKLCKL---KYYNFCPFYNIQHNYTCQTGDPLGPTGD 62
Query: 547 XXRSIY-----GERFEDENF--KLKHYGAGWLSMANA 636
R ++ G RF F L H G +SM+ A
Sbjct: 63 GGRCVWNVLNKGTRFFKAEFNPSLVHNKMGLVSMSTA 99
>SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 772
Score = 25.8 bits (54), Expect = 5.5
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = -3
Query: 555 APSSSITLGKITTLDHEIFNYSVELAPFVPLPLRFLS*LKEVLSCLRYSLS 403
+PSS + L K+ LDH + + S P P +++ K+ S L+ + S
Sbjct: 186 SPSSLVPLLKLPALDHAVSSSSSSDLPSDPNSASYIASSKQKASSLKLTSS 236
>SPAPB15E9.02c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 188
Score = 25.8 bits (54), Expect = 5.5
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -1
Query: 236 FSSFPCYFYKIRFECLFFQNLRY 168
FSSF F+++ F C FF L Y
Sbjct: 11 FSSFESLFFRLFFVCSFFFPLLY 33
>SPAC4G8.11c |atp10||F1-F0 ATPase assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 267
Score = 25.4 bits (53), Expect = 7.3
Identities = 14/58 (24%), Positives = 27/58 (46%)
Frame = +2
Query: 143 VFKSNFLFYIVNFEKINIRNEFCKNSKETN*TRFNHGYPYNGFXEFCCSSLVPNLMKF 316
+FK ++ NF ++RN++ + K+ + F N F E C + + +L F
Sbjct: 110 LFKEKSALWMYNFHGKSLRNQYKELYKDWQGSPFFFALFSNAFGENQCRNWIQHLAPF 167
>SPAC17A2.09c |csx1||RNA-binding protein Csx1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 632
Score = 25.0 bits (52), Expect = 9.6
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -3
Query: 327 RSFGNFIRFGTSDEQQNSLKPL*GY 253
R +G F+RF + EQQ++L + GY
Sbjct: 224 RKYG-FVRFSSEKEQQHALMHMQGY 247
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,606,663
Number of Sequences: 5004
Number of extensions: 51522
Number of successful extensions: 135
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 126
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 297805304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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