BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fprWP01_F_E06 (656 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase, ch... 128 3e-30 At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase, pu... 126 1e-29 At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase / c... 126 1e-29 At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase cyc... 120 9e-28 At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase, pu... 117 8e-27 At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase / c... 100 2e-21 At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase / c... 99 3e-21 At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase, cy... 98 5e-21 At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 97 7e-21 At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 97 7e-21 At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase, pu... 97 7e-21 At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase, pu... 97 1e-20 At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase / c... 96 2e-20 At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase, pu... 95 4e-20 At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase / c... 92 3e-19 At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase, pu... 73 2e-13 At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 66 2e-11 At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase cyc... 65 3e-11 At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase cyc... 65 3e-11 At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 58 7e-09 At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase, pu... 48 4e-06 At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase cyc... 44 7e-05 At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu... 41 8e-04 At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase cyc... 39 0.003 At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase cyc... 38 0.004 At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase cyc... 38 0.004 At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase cyc... 38 0.004 At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase cyc... 36 0.018 At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase cyc... 30 1.2 At1g55810.3 68414.m06396 uracil phosphoribosyltransferase, putat... 27 8.3 At1g55810.2 68414.m06395 uracil phosphoribosyltransferase, putat... 27 8.3 At1g55810.1 68414.m06394 uracil phosphoribosyltransferase, putat... 27 8.3 >At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase, chloroplast / cyclophilin / rotamase / cyclosporin A-binding protein (ROC4) identical to peptidyl-prolyl cis-trans isomerase, chloroplast precursor, PPIase (cyclophilin, cyclosporin A-binding protein) [Arabidopsis thaliana] SWISS-PROT:P34791; identical to cDNA nuclear-encoded chloroplast stromal cyclophilin (ROC4) GI:405130 Length = 260 Score = 128 bits (309), Expect = 3e-30 Identities = 65/122 (53%), Positives = 80/122 (65%) Frame = +1 Query: 289 IASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG 468 +A+ + + I KVT+KV FD++IG + G IV+GLFG+ VPKT ENF L + G Sbjct: 79 MAAEEEEVIEPQAKVTNKVYFDVEIGGEVAGRIVMGLFGEVVPKTVENFRALCTGEKKYG 138 Query: 469 YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDT 648 YKGS FHR+IK+FMIQ SIYG +FEDENF LKH G G LSMANAG +T Sbjct: 139 YKGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGAKFEDENFTLKHTGPGILSMANAGPNT 198 Query: 649 NG 654 NG Sbjct: 199 NG 200 >At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative (ROC7) similar to cyclophilin [Arabidopsis thaliana] gi|2443755|gb|AAB71401 Length = 204 Score = 126 bits (304), Expect = 1e-29 Identities = 69/129 (53%), Positives = 82/129 (63%), Gaps = 7/129 (5%) Frame = +1 Query: 289 IASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG 468 I + KS E K ++THKV FD++I G IV+GLFGKTVPKT ENF L +G G Sbjct: 21 IQAKKSKENLK--EITHKVYFDVEIDGKAAGRIVMGLFGKTVPKTVENFRALCTGEKGIG 78 Query: 469 -------YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSM 627 YKGS FHR+I +FM+Q SIYGE+F DENFKLKH G G+LSM Sbjct: 79 KNGKALHYKGSSFHRIIPSFMLQGGDFTHGNGMGGESIYGEKFADENFKLKHTGPGFLSM 138 Query: 628 ANAGKDTNG 654 ANAG+DTNG Sbjct: 139 ANAGQDTNG 147 >At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase / cyclophilin (CYP5) / rotamase identical to cyclophilin [Arabidopsis thaliana] gi|2443755|gb|AAB71401 Length = 201 Score = 126 bits (304), Expect = 1e-29 Identities = 69/129 (53%), Positives = 83/129 (64%), Gaps = 7/129 (5%) Frame = +1 Query: 289 IASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG 468 IAS ++ E K +VTHKV FD++I + G +VIGLFGK VPKT ENF L +G G Sbjct: 18 IASIQAKEDLK--EVTHKVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVG 75 Query: 469 -------YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSM 627 YKGSKFHR+I +FMIQ SIYG++F DENFKLKH G G LSM Sbjct: 76 KSGKPLHYKGSKFHRIIPSFMIQGGDFTHGNGMGGESIYGQKFADENFKLKHTGPGVLSM 135 Query: 628 ANAGKDTNG 654 AN+G+DTNG Sbjct: 136 ANSGEDTNG 144 >At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein contains Pfam domain, PF00160: peptidyl-prolyl cis-trans isomerase, cyclophilin-type Length = 259 Score = 120 bits (289), Expect = 9e-28 Identities = 60/112 (53%), Positives = 73/112 (65%), Gaps = 3/112 (2%) Frame = +1 Query: 328 KVTHKVSFDMKIGDDN---IGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVI 498 K+THKV FD+ +G+ G IVIGL+G VP+T ENF L +G GYKGS FHRVI Sbjct: 87 KITHKVYFDISVGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVI 146 Query: 499 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNG 654 ++FMIQ +S+YG F+DENFKL H G G LSMANAG +TNG Sbjct: 147 RDFMIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNG 198 >At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative similar to cyclophilin [Arabidopsis thaliana] gi|2443755|gb|AAB71401 Length = 228 Score = 117 bits (281), Expect = 8e-27 Identities = 63/130 (48%), Positives = 79/130 (60%), Gaps = 8/130 (6%) Frame = +1 Query: 289 IASAKSDEIPKGPK-VTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGE 465 I AK +++ + + VTHKV FD++I G I+IGLFG VPKT ENF L +G Sbjct: 42 ILDAKLNQVGEDLEGVTHKVYFDIQINGSPAGRILIGLFGNIVPKTAENFRSLCTGEKGV 101 Query: 466 G-------YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLS 624 G +KGS FHR+I FMIQ SIYG++F DENFKLKH G G+LS Sbjct: 102 GNMGKPLYFKGSSFHRIIPGFMIQGGDFTRGDGRGGESIYGDKFADENFKLKHTGPGFLS 161 Query: 625 MANAGKDTNG 654 MAN+G D+NG Sbjct: 162 MANSGPDSNG 171 >At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase / cyclophilin (CYP2) / rotamase identical to cyclophilin [Arabidopsis thaliana] gi|2443757|gb|AAB71402; similar to peptidyl-prolyl cis-trans isomerase, PPIase (cyclophilin, cyclosporin A-binding protein) [Arabidopsis thaliana] SWISS-PROT:P34790 Length = 174 Score = 99.5 bits (237), Expect = 2e-21 Identities = 56/112 (50%), Positives = 63/112 (56%), Gaps = 7/112 (6%) Frame = +1 Query: 340 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 498 KV FDM IG G IV+ L+ PKT ENF L +G G +KGS FHRVI Sbjct: 6 KVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHRVI 65 Query: 499 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNG 654 NFM Q SIYG +FEDENF+ KH G G LSMANAG +TNG Sbjct: 66 PNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGANTNG 117 >At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase / cyclophilin / rotamase / cyclosporin A-binding protein (ROC1) identical to SP|P34790 Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) {Arabidopsis thaliana} Length = 172 Score = 98.7 bits (235), Expect = 3e-21 Identities = 55/112 (49%), Positives = 63/112 (56%), Gaps = 7/112 (6%) Frame = +1 Query: 340 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 498 KV FDM I G IV+ L+ P+T ENF L +G G +KGSKFHRVI Sbjct: 5 KVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKFHRVI 64 Query: 499 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNG 654 NFM Q SIYG +FEDENF+ KH G G LSMANAG +TNG Sbjct: 65 PNFMCQGGDFTAGNGTGGESIYGSKFEDENFERKHTGPGILSMANAGANTNG 116 >At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase, cytosolic / cyclophilin / rotamase (ROC3) identical to cytosolic cyclophilin [Arabidopsis thaliana] GI:1305455 Length = 173 Score = 97.9 bits (233), Expect = 5e-21 Identities = 54/112 (48%), Positives = 62/112 (55%), Gaps = 7/112 (6%) Frame = +1 Query: 340 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 498 KV FDM +G + G IV+ L+ T P+T ENF L G G YKGS FHRVI Sbjct: 6 KVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRVI 65 Query: 499 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNG 654 FM Q SIYG +F+DENF KH G G LSMANAG +TNG Sbjct: 66 PKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHTGPGILSMANAGANTNG 117 >At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein similar to cyclophylin [Digitalis lanata] GI:1563719; contains Pfam profile PF00160: peptidyl-prolyl cis-trans isomerase, cyclophilin-type; contains AT-donor splice site at intron 9 Length = 387 Score = 97.5 bits (232), Expect = 7e-21 Identities = 56/117 (47%), Positives = 62/117 (52%), Gaps = 8/117 (6%) Frame = +1 Query: 328 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSK 483 K V D+ IG D + IVI LF VPKT ENF L G G +KGS Sbjct: 4 KKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGSS 63 Query: 484 FHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNG 654 FHRVIK FM Q SIYG +F DENF+L H GAG LSMAN G +TNG Sbjct: 64 FHRVIKGFMAQGGDFSNGNGTGGESIYGGKFSDENFRLDHDGAGVLSMANCGPNTNG 120 >At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein similar to cyclophylin [Digitalis lanata] GI:1563719; contains Pfam profile PF00160: peptidyl-prolyl cis-trans isomerase, cyclophilin-type; contains AT-donor splice site at intron 9 Length = 570 Score = 97.5 bits (232), Expect = 7e-21 Identities = 56/117 (47%), Positives = 62/117 (52%), Gaps = 8/117 (6%) Frame = +1 Query: 328 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSK 483 K V D+ IG D + IVI LF VPKT ENF L G G +KGS Sbjct: 4 KKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGSS 63 Query: 484 FHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNG 654 FHRVIK FM Q SIYG +F DENF+L H GAG LSMAN G +TNG Sbjct: 64 FHRVIKGFMAQGGDFSNGNGTGGESIYGGKFSDENFRLDHDGAGVLSMANCGPNTNG 120 >At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative similar to peptidyl-prolyl cis-trans isomerase, PPIase (cyclophilin, cyclosporin A-binding protein) [Catharanthus roseus] SWISS-PROT:Q39613 Length = 176 Score = 97.5 bits (232), Expect = 7e-21 Identities = 53/112 (47%), Positives = 61/112 (54%), Gaps = 7/112 (6%) Frame = +1 Query: 340 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 498 KV FD+ IG G +V+ LF P+T NF L G G YKGS FHR+I Sbjct: 5 KVFFDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAFHRII 64 Query: 499 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNG 654 FM Q SIYG +FEDENFKLKH G G LSMAN+G +TNG Sbjct: 65 PGFMCQGGDFTRGNGTGGESIYGSKFEDENFKLKHTGPGILSMANSGPNTNG 116 >At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative similar to cyclophilin [Arabidopsis thaliana] gi|2443755|gb|AAB71401 Length = 224 Score = 96.7 bits (230), Expect = 1e-20 Identities = 50/116 (43%), Positives = 67/116 (57%), Gaps = 7/116 (6%) Frame = +1 Query: 328 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKF 486 ++T++V D+ I +G IVIGL+G VPKT ENF L +G+ YKG+ F Sbjct: 44 EITNRVFLDVDIDGQRLGRIVIGLYGTVVPKTVENFRALCTGEKGKTSSGKPLHYKGTPF 103 Query: 487 HRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNG 654 HR+I F+IQ SIYG F DENFK++H AG ++MAN G D+NG Sbjct: 104 HRIISGFVIQGGDIIHGDGKSSDSIYGGTFPDENFKIQHSHAGMVAMANTGPDSNG 159 >At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamase identical to cyclophilin-40 [Arabidopsis thaliana] GI:13442983; supporting cDNA gi|13442982|gb|AY026065.1| Length = 361 Score = 96.3 bits (229), Expect = 2e-20 Identities = 54/113 (47%), Positives = 65/113 (57%), Gaps = 8/113 (7%) Frame = +1 Query: 340 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSKFHRV 495 K D+ IG + G IVI L+ VPKT ENF L +G G YKG++FHRV Sbjct: 5 KCFMDISIGGELEGRIVIELYDDVVPKTAENFRLLCTGEKGLGPNTGVPLHYKGNRFHRV 64 Query: 496 IKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNG 654 IK FMIQ SIYG +F+DENF+LKH G LSMAN+G +TNG Sbjct: 65 IKGFMIQGGDISANDGTGGESIYGLKFDDENFELKHERKGMLSMANSGPNTNG 117 >At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative similar to cyclophilin [Homo sapiens] gi|3647230|gb|AAC60793 Length = 199 Score = 95.1 bits (226), Expect = 4e-20 Identities = 55/118 (46%), Positives = 65/118 (55%), Gaps = 5/118 (4%) Frame = +1 Query: 316 PKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQ---KPEGE--GYKGS 480 P PK V FD+ IG G I + LF PKT ENF Q + G+ GYK Sbjct: 26 PPNPK-NPVVFFDVSIGGIPAGRIKMELFADIAPKTAENFRQFCTGELRKAGKPLGYKEC 84 Query: 481 KFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNG 654 +FHRVIK+FM+Q SIYG +FEDENF KH G G LSMAN+G +TNG Sbjct: 85 QFHRVIKDFMVQSGDFLKNDGSGCMSIYGHKFEDENFTAKHTGPGLLSMANSGPNTNG 142 >At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase / cyclophilin (CYP1) / rotamase identical to cyclophilin (CYP1) gi|992643|gb|AAA75512; similar to peptidyl-prolyl cis-trans isomerase, PPIase (cyclophilin, cyclosporin A-binding protein) [Catharanthus roseus] SWISS-PROT:Q39613 Length = 172 Score = 91.9 bits (218), Expect = 3e-19 Identities = 52/112 (46%), Positives = 61/112 (54%), Gaps = 7/112 (6%) Frame = +1 Query: 340 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 498 +V FDM + IG I + LF T P T ENF L +G G +KGS FHRVI Sbjct: 5 RVFFDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIFHRVI 64 Query: 499 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNG 654 FM Q SIYG +F+DENF KH GAG LSMAN+G +TNG Sbjct: 65 PGFMCQGGDFTAKNGTGGESIYGAKFKDENFIKKHTGAGILSMANSGPNTNG 116 >At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative contains Pfam domain, PF00160: peptidyl-prolyl cis-trans isomerase, cyclophilin-type Length = 164 Score = 72.5 bits (170), Expect = 2e-13 Identities = 39/97 (40%), Positives = 58/97 (59%), Gaps = 1/97 (1%) Frame = +1 Query: 367 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXX 546 + ++G + ++ K P+T NF +L+++ Y FHR++K+F++Q Sbjct: 15 ETSMGPFTVEMYYKHSPRTCRNFLELSRRGY---YDNVLFHRIVKDFIVQGGDPTGTGRG 71 Query: 547 XXRSIYGERFEDE-NFKLKHYGAGWLSMANAGKDTNG 654 SIYG +FEDE N +LKH GAG LSMANAG +TNG Sbjct: 72 G-ESIYGSKFEDEINKELKHTGAGILSMANAGPNTNG 107 >At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein weak similarity to CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam profile PF00160: peptidyl-prolyl cis-trans isomerase, cyclophilin-type Length = 837 Score = 66.1 bits (154), Expect = 2e-11 Identities = 43/117 (36%), Positives = 56/117 (47%), Gaps = 8/117 (6%) Frame = +1 Query: 328 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSK 483 K +V D+ I D T+V LF + PKT+ENF L +G G YKGS Sbjct: 4 KKNPQVFMDVSIDGDPAETMVFELFPEVAPKTSENFRALCTGEKGIGPRSGKPLHYKGSF 63 Query: 484 FHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNG 654 FHR++K Q SIY +F DE+ KL+H G LSM+ A +D G Sbjct: 64 FHRIMKGSSAQAGDFVNRNGTAGESIYAGKFPDESPKLRHEETGLLSMSIADRDKFG 120 >At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein contains Pfam domain, PF00160: peptidyl-prolyl cis-trans isomerase, cyclophilin-type Length = 595 Score = 65.3 bits (152), Expect = 3e-11 Identities = 46/116 (39%), Positives = 57/116 (49%), Gaps = 1/116 (0%) Frame = +1 Query: 310 EIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFH 489 ++ K PK V F GD NI L P+ ENF L ++ Y G FH Sbjct: 335 KVEKNPKKKGYVQFQTTHGDLNIE-----LHCDIAPRACENFITLCERGY---YNGVAFH 386 Query: 490 RVIKNFMIQXXXXXXXXXXXXRSIYGERFEDE-NFKLKHYGAGWLSMANAGKDTNG 654 R I+NFMIQ SI+G+ F+DE N KL H G G +SMAN+G TNG Sbjct: 387 RSIRNFMIQGGDPTGTGKGG-ESIWGKPFKDEPNSKLLHSGRGVVSMANSGPHTNG 441 >At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein contains Pfam domain, PF00160: peptidyl-prolyl cis-trans isomerase, cyclophilin-type Length = 160 Score = 65.3 bits (152), Expect = 3e-11 Identities = 41/95 (43%), Positives = 50/95 (52%), Gaps = 1/95 (1%) Frame = +1 Query: 373 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 552 N+G I +F VPK+ ENF L Y G+ FHR IK FMIQ Sbjct: 8 NLGDIKCEIFCDEVPKSAENFLALCASGY---YDGTIFHRNIKGFMIQGGDPKGTGKGGT 64 Query: 553 RSIYGERFEDE-NFKLKHYGAGWLSMANAGKDTNG 654 SI+G++F DE LKH G LSMAN+G +TNG Sbjct: 65 -SIWGKKFNDEIRDSLKHNARGMLSMANSGPNTNG 98 >At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein similar to SP|P87051 Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8) (Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains Pfam profiles PF00160: peptidyl-prolyl cis-trans isomerase cyclophilin-type, PF00400: WD domain G-beta repeat Length = 631 Score = 57.6 bits (133), Expect = 7e-09 Identities = 39/94 (41%), Positives = 49/94 (52%), Gaps = 1/94 (1%) Frame = +1 Query: 376 IGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXR 555 +G I + L+ + PKT ENF + Y FHRVI+ FMIQ + Sbjct: 484 LGDIHMKLYPEECPKTVENFTTHCRNGY---YDNHLFHRVIRGFMIQTGDPLGDGTGG-Q 539 Query: 556 SIYGERFEDENFK-LKHYGAGWLSMANAGKDTNG 654 SI+G FEDE K L+H LSMANAG +TNG Sbjct: 540 SIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNG 573 >At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative similar to peptidyl-prolyl cis-trans isomerase PPIase (cyclophilin, cyclosporin A-binding protein) [Tomato] SWISS-PROT:P21568 Length = 232 Score = 48.4 bits (110), Expect = 4e-06 Identities = 36/107 (33%), Positives = 47/107 (43%), Gaps = 8/107 (7%) Frame = +1 Query: 340 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 498 KV FD+ + G IVI LF P+T ENF L G G YKGS F ++ Sbjct: 5 KVFFDLTVDGKPAGRIVIELFADLTPRTAENFRGLCTGERGIGKCGKPIHYKGSTFDHIV 64 Query: 499 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHY-GAGWLSMANA 636 + M I+ E +DE F L H G G +SMA++ Sbjct: 65 PDLM----WCGGDIIFENEPIHSEELDDEYFILNHEDGPGIISMADS 107 >At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein contains Pfam domain, PF00160: peptidyl-prolyl cis-trans isomerase, cyclophilin-type Length = 504 Score = 44.4 bits (100), Expect = 7e-05 Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 3/95 (3%) Frame = +1 Query: 379 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGY-KGSKFHRVIKNFMIQXXXXXXXXXXXXR 555 G I + L+ K PK+ NF QL EGY + FHRVI F++Q Sbjct: 22 GPIDVELWPKEAPKSVRNFVQLCL----EGYFDNTIFHRVIPGFLVQGGDPTGSGTGGD- 76 Query: 556 SIYGERFEDE-NFKLKHYGAGWLSMANAGK-DTNG 654 SIYG F DE + +L+ G ++MANA ++NG Sbjct: 77 SIYGGVFADEFHSRLRFSHRGIVAMANASSPNSNG 111 >At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, putative Length = 506 Score = 40.7 bits (91), Expect = 8e-04 Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 7/100 (7%) Frame = +1 Query: 373 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ---XXXXXXXXX 543 ++G IVI L P T +NF +L + + Y G FH V K+F Q Sbjct: 8 SLGDIVIDLHSDKCPLTCKNFLKLCKI---KYYNGCLFHTVQKDFTAQTGDPTGTGAGGD 64 Query: 544 XXXRSIYGER---FEDE-NFKLKHYGAGWLSMANAGKDTN 651 + +YGE+ ++DE + LKH G ++MA+ G++ N Sbjct: 65 SIYKFLYGEQARFYKDEIHLDLKHSKTGTVAMASGGENLN 104 >At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein contains Pfam domain, PF00160: peptidyl-prolyl cis-trans isomerase, cyclophilin-type Length = 317 Score = 38.7 bits (86), Expect = 0.003 Identities = 18/59 (30%), Positives = 29/59 (49%) Frame = +1 Query: 334 THKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFM 510 T K D+ I + IG I+IGL+G VP T F + G Y+ F +++ ++ Sbjct: 91 TKKAFIDVSIDGEPIGRIIIGLYGDDVPAGTARFSSIVSGKAGITYRRKDFVKIMPGYV 149 >At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein contains Pfam domain, PF00160: peptidyl-prolyl cis-trans isomerase, cyclophilin-type Length = 236 Score = 38.3 bits (85), Expect = 0.004 Identities = 18/46 (39%), Positives = 27/46 (58%) Frame = +1 Query: 379 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 516 G I + LF + P+ + F L QK + +KG F RVIKN+++Q Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQK---DHFKGMPFQRVIKNYLVQ 132 >At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein contains Pfam domain, PF00160: peptidyl-prolyl cis-trans isomerase, cyclophilin-type Length = 236 Score = 38.3 bits (85), Expect = 0.004 Identities = 18/46 (39%), Positives = 27/46 (58%) Frame = +1 Query: 379 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 516 G I + LF + P+ + F L QK + +KG F RVIKN+++Q Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQK---DHFKGMPFQRVIKNYLVQ 132 >At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein contains Pfam domain, PF00160: peptidyl-prolyl cis-trans isomerase, cyclophilin-type Length = 236 Score = 38.3 bits (85), Expect = 0.004 Identities = 18/46 (39%), Positives = 27/46 (58%) Frame = +1 Query: 379 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 516 G I + LF + P+ + F L QK + +KG F RVIKN+++Q Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQK---DHFKGMPFQRVIKNYLVQ 132 >At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein contains Pfam domain, PF00160: peptidyl-prolyl cis-trans isomerase, cyclophilin-type Length = 230 Score = 36.3 bits (80), Expect = 0.018 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Frame = +1 Query: 367 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGY-KGSKFHRVIKNFMIQ 516 D G++ I LF T P + F + Q +GY KG F RV+K+F+IQ Sbjct: 83 DTGKGSVTIELFKDTAPNVVDQFMKFCQ----DGYFKGFLFSRVVKHFVIQ 129 >At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein contains Pfam domain, PF00160: peptidyl-prolyl cis-trans isomerase, cyclophilin-type Length = 290 Score = 30.3 bits (65), Expect = 1.2 Identities = 12/40 (30%), Positives = 22/40 (55%) Frame = +1 Query: 376 IGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRV 495 +G +V+GL+G+ VP T F ++ YK + H++ Sbjct: 85 LGRVVLGLYGRHVPITVSTFKRMCTS-SSTSYKNTPVHKI 123 >At1g55810.3 68414.m06396 uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putative similar to SP|O65583 Uracil phosphoribosyltransferase (EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase) {Arabidopsis thaliana}; contains Pfam profile PF00485: Phosphoribulokinase / Uridine kinase family Length = 466 Score = 27.5 bits (58), Expect = 8.3 Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 1/64 (1%) Frame = +1 Query: 307 DEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLF-GKTVPKTTENFFQLAQKPEGEGYKGSK 483 +++P H + D +G N I L K VP++ F L PEG K Sbjct: 369 EKLPSDISERHVLLLDPILGTGNSAVQAIRLLISKGVPESNIIFLNLISAPEGVNVVCKK 428 Query: 484 FHRV 495 F R+ Sbjct: 429 FPRI 432 >At1g55810.2 68414.m06395 uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putative similar to SP|O65583 Uracil phosphoribosyltransferase (EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase) {Arabidopsis thaliana}; contains Pfam profile PF00485: Phosphoribulokinase / Uridine kinase family Length = 466 Score = 27.5 bits (58), Expect = 8.3 Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 1/64 (1%) Frame = +1 Query: 307 DEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLF-GKTVPKTTENFFQLAQKPEGEGYKGSK 483 +++P H + D +G N I L K VP++ F L PEG K Sbjct: 369 EKLPSDISERHVLLLDPILGTGNSAVQAIRLLISKGVPESNIIFLNLISAPEGVNVVCKK 428 Query: 484 FHRV 495 F R+ Sbjct: 429 FPRI 432 >At1g55810.1 68414.m06394 uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putative similar to SP|O65583 Uracil phosphoribosyltransferase (EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase) {Arabidopsis thaliana}; contains Pfam profile PF00485: Phosphoribulokinase / Uridine kinase family Length = 466 Score = 27.5 bits (58), Expect = 8.3 Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 1/64 (1%) Frame = +1 Query: 307 DEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLF-GKTVPKTTENFFQLAQKPEGEGYKGSK 483 +++P H + D +G N I L K VP++ F L PEG K Sbjct: 369 EKLPSDISERHVLLLDPILGTGNSAVQAIRLLISKGVPESNIIFLNLISAPEGVNVVCKK 428 Query: 484 FHRV 495 F R+ Sbjct: 429 FPRI 432 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,293,697 Number of Sequences: 28952 Number of extensions: 258794 Number of successful extensions: 531 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 502 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 509 length of database: 12,070,560 effective HSP length: 78 effective length of database: 9,812,304 effective search space used: 1373722560 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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